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Patterns and causes of species richness: a general simulation model for macroecology

diversity

Anderson MJ, Arita HT, Chao A, Gotelli NJ.
GSID: x2AEq_18uzEJ
NJ Gotelli, MJ Anderson, HT Arita, A Chao… - Ecology …, 2009 - Wiley Online Library

Understanding the causes of spatial variation in species richness is a major research focus of biogeography and macroecology. Gridded environmental data and species richness …

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Gotelli, N. J., Anderson, M. J., Arita, H. T., Chao, A., Colwell, R. K., Connolly, S. R., ... & Willig, M. R. (2009). Patterns and causes of species richness: a general simulation model for macroecology. Ecology letters, 12(9), 873-886.
Gotelli, Nicholas J., et al. "Patterns and causes of species richness: a general simulation model for macroecology." Ecology letters 12.9 (2009): 873-886.
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[Survival rate].

Kyobu geka. The Japanese journal of thoracic surgery

Agata T, Kano K.
PMID: 3386082
Kyobu Geka. 1988 Mar;41(3):260-2.

No abstract available.

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Agata T, Kano K. [Survival rate]. Kyobu Geka. 1988;41(3):260-2
Agata, T., & Kano, K. (1988). [Survival rate]. Kyobu geka. The Japanese journal of thoracic surgery, 41(3), 260-2.
Agata, T, and Kano, K. "[Survival rate]." Kyobu geka. The Japanese journal of thoracic surgery vol. 41,3 (1988): 260-2.
Agata T, Kano K. [Survival rate]. Kyobu Geka. 1988 Mar;41(3):260-2. Japanese. PMID: 3386082.
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Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors.

Physical review letters

Sakano M, Bahramy MS, Katayama A, Shimojima T, Murakawa H, Kaneko Y, Malaeb W, Shin S, Ono K, Kumigashira H, Arita R, Nagaosa N, Hwang HY, Tokura Y, Ishizaka K.
PMID: 23521291
Phys Rev Lett. 2013 Mar 08;110(10):107204. doi: 10.1103/PhysRevLett.110.107204. Epub 2013 Mar 07.

We investigate the two-dimensional highly spin-polarized electron accumulation layers commonly appearing near the surface of n-type polar semiconductors BiTeX (X=I, Br, and Cl) by angular-resolved photoemission spectroscopy. Because of the polarity and the strong spin-orbit interaction built in the...

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Sakano M, Bahramy MS, Katayama A, et al. Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors. Phys Rev Lett. 2013;110(10):107204doi: 10.1103/PhysRevLett.110.107204.
Sakano, M., Bahramy, M. S., Katayama, A., Shimojima, T., Murakawa, H., Kaneko, Y., Malaeb, W., Shin, S., Ono, K., Kumigashira, H., Arita, R., Nagaosa, N., Hwang, H. Y., Tokura, Y., & Ishizaka, K. (2013). Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors. Physical review letters, 110(10), 107204. https://doi.org/10.1103/PhysRevLett.110.107204
Sakano, M, et al. "Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors." Physical review letters vol. 110,10 (2013): 107204. doi: https://doi.org/10.1103/PhysRevLett.110.107204
Sakano M, Bahramy MS, Katayama A, Shimojima T, Murakawa H, Kaneko Y, Malaeb W, Shin S, Ono K, Kumigashira H, Arita R, Nagaosa N, Hwang HY, Tokura Y, Ishizaka K. Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors. Phys Rev Lett. 2013 Mar 08;110(10):107204. doi: 10.1103/PhysRevLett.110.107204. Epub 2013 Mar 07. PMID: 23521291.
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Electronic structure of ferromagnetic heavy fermion, YbPdSi, YbPdGe, and YbPtGe studied by photoelectron spectroscopy, x-ray emission spectroscopy, and DFT  +  DMFT calculations.

Journal of physics. Condensed matter : an Institute of Physics journal

Yamaoka H, Thunström P, Tsujii N, Katoh K, Yamamoto Y, Schwier EF, Shimada K, Iwasawa H, Arita M, Jarrige I, Hiraoka N, Ishii H, Tsuei KD, Mizuki J.
PMID: 28891807
J Phys Condens Matter. 2017 Nov 29;29(47):475502. doi: 10.1088/1361-648X/aa8b98.

Electronic structures of ferromagnetic heavy fermion Yb compounds of YbPdSi, YbPdGe, and YbPtGe are studied by photoelectron spectroscopy around the Yb 4d-4f resonance, resonant x-ray emission spectroscopy at the Yb L

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Yamaoka H, Thunström P, Tsujii N, et al. Electronic structure of ferromagnetic heavy fermion, YbPdSi, YbPdGe, and YbPtGe studied by photoelectron spectroscopy, x-ray emission spectroscopy, and DFT  +  DMFT calculations. J Phys Condens Matter. 2017;29(47):475502doi: 10.1088/1361-648X/aa8b98.
Yamaoka, H., Thunström, P., Tsujii, N., Katoh, K., Yamamoto, Y., Schwier, E. F., Shimada, K., Iwasawa, H., Arita, M., Jarrige, I., Hiraoka, N., Ishii, H., Tsuei, K. D., & Mizuki, J. (2017). Electronic structure of ferromagnetic heavy fermion, YbPdSi, YbPdGe, and YbPtGe studied by photoelectron spectroscopy, x-ray emission spectroscopy, and DFT  +  DMFT calculations. Journal of physics. Condensed matter : an Institute of Physics journal, 29(47), 475502. https://doi.org/10.1088/1361-648X/aa8b98
Yamaoka, Hitoshi, et al. "Electronic structure of ferromagnetic heavy fermion, YbPdSi, YbPdGe, and YbPtGe studied by photoelectron spectroscopy, x-ray emission spectroscopy, and DFT  +  DMFT calculations." Journal of physics. Condensed matter : an Institute of Physics journal vol. 29,47 (2017): 475502. doi: https://doi.org/10.1088/1361-648X/aa8b98
Yamaoka H, Thunström P, Tsujii N, Katoh K, Yamamoto Y, Schwier EF, Shimada K, Iwasawa H, Arita M, Jarrige I, Hiraoka N, Ishii H, Tsuei KD, Mizuki J. Electronic structure of ferromagnetic heavy fermion, YbPdSi, YbPdGe, and YbPtGe studied by photoelectron spectroscopy, x-ray emission spectroscopy, and DFT  +  DMFT calculations. J Phys Condens Matter. 2017 Nov 29;29(47):475502. doi: 10.1088/1361-648X/aa8b98. PMID: 28891807.
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Critical Involvement of Environmental Carbon Dioxide Fixation to Drive Wax Ester Fermentation in Euglena.

PloS one

Padermshoke A, Ogawa T, Nishio K, Nakazawa M, Nakamoto M, Okazawa A, Kanaya S, Arita M, Ohta D.
PMID: 27669566
PLoS One. 2016 Sep 26;11(9):e0162827. doi: 10.1371/journal.pone.0162827. eCollection 2016.

Accumulation profiles of wax esters in Euglena gracilis Z were studied under several environmental conditions. The highest amount of total wax esters accumulated under hypoxia in the dark, and C28 (myristyl-myristate, C14:0-C14:0) was prevalent among all conditions investigated. The...

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Padermshoke A, Ogawa T, Nishio K, et al. Critical Involvement of Environmental Carbon Dioxide Fixation to Drive Wax Ester Fermentation in Euglena. PLoS One. 2016;11(9):e0162827doi: 10.1371/journal.pone.0162827.
Padermshoke, A., Ogawa, T., Nishio, K., Nakazawa, M., Nakamoto, M., Okazawa, A., Kanaya, S., Arita, M., & Ohta, D. (2016). Critical Involvement of Environmental Carbon Dioxide Fixation to Drive Wax Ester Fermentation in Euglena. PloS one, 11(9), e0162827. https://doi.org/10.1371/journal.pone.0162827
Padermshoke, Adchara, et al. "Critical Involvement of Environmental Carbon Dioxide Fixation to Drive Wax Ester Fermentation in Euglena." PloS one vol. 11,9 (2016): e0162827. doi: https://doi.org/10.1371/journal.pone.0162827
Padermshoke A, Ogawa T, Nishio K, Nakazawa M, Nakamoto M, Okazawa A, Kanaya S, Arita M, Ohta D. Critical Involvement of Environmental Carbon Dioxide Fixation to Drive Wax Ester Fermentation in Euglena. PLoS One. 2016 Sep 26;11(9):e0162827. doi: 10.1371/journal.pone.0162827. eCollection 2016. PMID: 27669566; PMCID: PMC5036851.
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Malignant Melanoma on a Thermal Burn Scar with an Interval of More Than 70 Years.

Case reports in dermatology

Uchida S, Oiso N, Shiga K, Narita T, Kawada A.
PMID: 27721752
Case Rep Dermatol. 2016 Jul 26;8(2):207-209. doi: 10.1159/000446837. eCollection 2016.

Cases of malignant melanoma on thermal burn scars have occasionally been reported. We report a 78-year-old Japanese female with malignant melanoma on a thermal burn scar with an interval of more than 70 years. Our case reemphasizes the importance...

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Uchida S, Oiso N, Shiga K, et al. Malignant Melanoma on a Thermal Burn Scar with an Interval of More Than 70 Years. Case Rep Dermatol. 2016;8(2):207-209doi: 10.1159/000446837.
Uchida, S., Oiso, N., Shiga, K., Narita, T., & Kawada, A. (2016). Malignant Melanoma on a Thermal Burn Scar with an Interval of More Than 70 Years. Case reports in dermatology, 8(2), 207-209. https://doi.org/10.1159/000446837
Uchida, Shusuke, et al. "Malignant Melanoma on a Thermal Burn Scar with an Interval of More Than 70 Years." Case reports in dermatology vol. 8,2 (2016): 207-209. doi: https://doi.org/10.1159/000446837
Uchida S, Oiso N, Shiga K, Narita T, Kawada A. Malignant Melanoma on a Thermal Burn Scar with an Interval of More Than 70 Years. Case Rep Dermatol. 2016 Jul 26;8(2):207-209. doi: 10.1159/000446837. eCollection 2016. PMID: 27721752; PMCID: PMC5043246.
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Single Cell-Based Vector Tracing in Patients with ADA-SCID Treated with Stem Cell Gene Therapy.

Molecular therapy. Methods & clinical development

Igarashi Y, Uchiyama T, Minegishi T, Takahashi S, Watanabe N, Kawai T, Yamada M, Ariga T, Onodera M.
PMID: 28626778
Mol Ther Methods Clin Dev. 2017 May 25;6:8-16. doi: 10.1016/j.omtm.2017.05.005. eCollection 2017 Sep 15.

Clinical improvement in stem cell gene therapy (SCGT) for primary immunodeficiencies depends on the engraftment levels of genetically corrected cells, and tracing the transgene in each hematopoietic lineage is therefore extremely important in evaluating the efficacy of SCGT. We...

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Igarashi Y, Uchiyama T, Minegishi T, et al. Single Cell-Based Vector Tracing in Patients with ADA-SCID Treated with Stem Cell Gene Therapy. Mol Ther Methods Clin Dev. 2017;6:8-16doi: 10.1016/j.omtm.2017.05.005.
Igarashi, Y., Uchiyama, T., Minegishi, T., Takahashi, S., Watanabe, N., Kawai, T., Yamada, M., Ariga, T., & Onodera, M. (2017). Single Cell-Based Vector Tracing in Patients with ADA-SCID Treated with Stem Cell Gene Therapy. Molecular therapy. Methods & clinical development, 68-16. https://doi.org/10.1016/j.omtm.2017.05.005
Igarashi, Yuka, et al. "Single Cell-Based Vector Tracing in Patients with ADA-SCID Treated with Stem Cell Gene Therapy." Molecular therapy. Methods & clinical development vol. 6 (2017): 8-16. doi: https://doi.org/10.1016/j.omtm.2017.05.005
Igarashi Y, Uchiyama T, Minegishi T, Takahashi S, Watanabe N, Kawai T, Yamada M, Ariga T, Onodera M. Single Cell-Based Vector Tracing in Patients with ADA-SCID Treated with Stem Cell Gene Therapy. Mol Ther Methods Clin Dev. 2017 May 25;6:8-16. doi: 10.1016/j.omtm.2017.05.005. eCollection 2017 Sep 15. PMID: 28626778; PMCID: PMC5466583.
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Potent anti-tumor activity of a syringolin analog in multiple myeloma: a dual inhibitor of proteasome activity targeting β2 and β5 subunits.

Oncotarget

Yoshida T, Ri M, Kanamori T, Aoki S, Ashour R, Kinoshita S, Narita T, Totani H, Masaki A, Ito A, Kusumoto S, Ishida T, Komatsu H, Kitahata S, Chiba T, Ichikawa S, Iida S.
PMID: 29515784
Oncotarget. 2018 Jan 11;9(11):9975-9991. doi: 10.18632/oncotarget.24160. eCollection 2018 Feb 09.

Proteasome inhibitors (PI), mainly targeting the β5 subunit of the 20S proteasome, are widely used in the treatment of multiple myeloma (MM). However, PI resistance remains an unresolved problem in the therapy of relapsed and refractory MM. To develop...

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Yoshida T, Ri M, Kanamori T, et al. Potent anti-tumor activity of a syringolin analog in multiple myeloma: a dual inhibitor of proteasome activity targeting β2 and β5 subunits. Oncotarget. 2018;9(11):9975-9991doi: 10.18632/oncotarget.24160.
Yoshida, T., Ri, M., Kanamori, T., Aoki, S., Ashour, R., Kinoshita, S., Narita, T., Totani, H., Masaki, A., Ito, A., Kusumoto, S., Ishida, T., Komatsu, H., Kitahata, S., Chiba, T., Ichikawa, S., & Iida, S. (2018). Potent anti-tumor activity of a syringolin analog in multiple myeloma: a dual inhibitor of proteasome activity targeting β2 and β5 subunits. Oncotarget, 9(11), 9975-9991. https://doi.org/10.18632/oncotarget.24160
Yoshida, Takashi, et al. "Potent anti-tumor activity of a syringolin analog in multiple myeloma: a dual inhibitor of proteasome activity targeting β2 and β5 subunits." Oncotarget vol. 9,11 (2018): 9975-9991. doi: https://doi.org/10.18632/oncotarget.24160
Yoshida T, Ri M, Kanamori T, Aoki S, Ashour R, Kinoshita S, Narita T, Totani H, Masaki A, Ito A, Kusumoto S, Ishida T, Komatsu H, Kitahata S, Chiba T, Ichikawa S, Iida S. Potent anti-tumor activity of a syringolin analog in multiple myeloma: a dual inhibitor of proteasome activity targeting β2 and β5 subunits. Oncotarget. 2018 Jan 11;9(11):9975-9991. doi: 10.18632/oncotarget.24160. eCollection 2018 Feb 09. PMID: 29515784; PMCID: PMC5839415.
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Stable and Efficient Linear Scaling First-Principles Molecular Dynamics for 10000+ Atoms.

Journal of chemical theory and computation

Arita M, Bowler DR, Miyazaki T.
PMID: 26583225
J Chem Theory Comput. 2014 Dec 09;10(12):5419-25. doi: 10.1021/ct500847y. Epub 2014 Nov 21.

The recent progress of linear-scaling or O(N) methods in density functional theory (DFT) is remarkable. Given this, we might expect that first-principles molecular dynamics (FPMD) simulations based on DFT could treat more realistic and complex systems using the O(N)...

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Arita M, Bowler DR, Miyazaki T. Stable and Efficient Linear Scaling First-Principles Molecular Dynamics for 10000+ Atoms. J Chem Theory Comput. 2014;10(12):5419-25doi: 10.1021/ct500847y.
Arita, M., Bowler, D. R., & Miyazaki, T. (2014). Stable and Efficient Linear Scaling First-Principles Molecular Dynamics for 10000+ Atoms. Journal of chemical theory and computation, 10(12), 5419-25. https://doi.org/10.1021/ct500847y
Arita, Michiaki, et al. "Stable and Efficient Linear Scaling First-Principles Molecular Dynamics for 10000+ Atoms." Journal of chemical theory and computation vol. 10,12 (2014): 5419-25. doi: https://doi.org/10.1021/ct500847y
Arita M, Bowler DR, Miyazaki T. Stable and Efficient Linear Scaling First-Principles Molecular Dynamics for 10000+ Atoms. J Chem Theory Comput. 2014 Dec 09;10(12):5419-25. doi: 10.1021/ct500847y. Epub 2014 Nov 21. PMID: 26583225.
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Structure-dependent electronic nature of star-shaped oligothiophenes, probed by ensemble and single-molecule spectroscopy.

Chemistry (Weinheim an der Bergstrasse, Germany)

Chung H, Narita T, Yang J, Kim P, Takase M, Iyoda M, Kim D.
PMID: 23737369
Chemistry. 2013 Jul 15;19(29):9699-709. doi: 10.1002/chem.201300313. Epub 2013 Jun 04.

We have investigated the photophysical properties of star-shaped oligothiophenes with three terthiophene arms (meta to each other, S3) or six terthiophene arms (ortho-, meta-, and para-arranged, S6) connected to an ethynylbenzene core to elucidate the relationship between their molecular...

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Chung H, Narita T, Yang J, et al. Structure-dependent electronic nature of star-shaped oligothiophenes, probed by ensemble and single-molecule spectroscopy. Chemistry. 2013;19(29):9699-709doi: 10.1002/chem.201300313.
Chung, H., Narita, T., Yang, J., Kim, P., Takase, M., Iyoda, M., & Kim, D. (2013). Structure-dependent electronic nature of star-shaped oligothiophenes, probed by ensemble and single-molecule spectroscopy. Chemistry (Weinheim an der Bergstrasse, Germany), 19(29), 9699-709. https://doi.org/10.1002/chem.201300313
Chung, Heejae, et al. "Structure-dependent electronic nature of star-shaped oligothiophenes, probed by ensemble and single-molecule spectroscopy." Chemistry (Weinheim an der Bergstrasse, Germany) vol. 19,29 (2013): 9699-709. doi: https://doi.org/10.1002/chem.201300313
Chung H, Narita T, Yang J, Kim P, Takase M, Iyoda M, Kim D. Structure-dependent electronic nature of star-shaped oligothiophenes, probed by ensemble and single-molecule spectroscopy. Chemistry. 2013 Jul 15;19(29):9699-709. doi: 10.1002/chem.201300313. Epub 2013 Jun 04. PMID: 23737369.
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Immunohistochemical and morphofunctional studies of skeletal muscle tissues with electric nerve stimulation by in vivo cryotechnique.

Acta histochemica et cytochemica

Fukasawa Y, Ohno N, Saitoh Y, Saigusa T, Arita J, Ohno S.
PMID: 26019372
Acta Histochem Cytochem. 2015 Apr 28;48(2):27-36. doi: 10.1267/ahc.14068. Epub 2015 Apr 16.

In this study, morphological and immunohistochemical alterations of skeletal muscle tissues during persistent contraction were examined by in vivo cryotechnique (IVCT). Contraction of gastrocnemius muscles was induced by sciatic nerve stimulation. The IVCT was performed immediately, 3 min or...

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Fukasawa Y, Ohno N, Saitoh Y, et al. Immunohistochemical and morphofunctional studies of skeletal muscle tissues with electric nerve stimulation by in vivo cryotechnique. Acta Histochem Cytochem. 2015;48(2):27-36doi: 10.1267/ahc.14068.
Fukasawa, Y., Ohno, N., Saitoh, Y., Saigusa, T., Arita, J., & Ohno, S. (2015). Immunohistochemical and morphofunctional studies of skeletal muscle tissues with electric nerve stimulation by in vivo cryotechnique. Acta histochemica et cytochemica, 48(2), 27-36. https://doi.org/10.1267/ahc.14068
Fukasawa, Yuki, et al. "Immunohistochemical and morphofunctional studies of skeletal muscle tissues with electric nerve stimulation by in vivo cryotechnique." Acta histochemica et cytochemica vol. 48,2 (2015): 27-36. doi: https://doi.org/10.1267/ahc.14068
Fukasawa Y, Ohno N, Saitoh Y, Saigusa T, Arita J, Ohno S. Immunohistochemical and morphofunctional studies of skeletal muscle tissues with electric nerve stimulation by in vivo cryotechnique. Acta Histochem Cytochem. 2015 Apr 28;48(2):27-36. doi: 10.1267/ahc.14068. Epub 2015 Apr 16. PMID: 26019372; PMCID: PMC4427562.
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Toward Homogenization of Heterogeneous Metal Nanoparticle Catalysts with Enhanced Catalytic Performance: Soluble Porous Organic Cage as a Stabilizer and Homogenizer.

Journal of the American Chemical Society

Sun JK, Zhan WW, Akita T, Xu Q.
PMID: 26020572
J Am Chem Soc. 2015 Jun 10;137(22):7063-6. doi: 10.1021/jacs.5b04029. Epub 2015 Jun 02.

Organic molecular cage (CC3-R) with intrinsically porous skeleton is used as a support for immobilizing Rh nanoparticles (NPs) in an ultrasmall size of ∼1.1 nm for the first time. The CC3-R with the unique characteristic of high solubility can...

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Sun JK, Zhan WW, Akita T, et al. Toward Homogenization of Heterogeneous Metal Nanoparticle Catalysts with Enhanced Catalytic Performance: Soluble Porous Organic Cage as a Stabilizer and Homogenizer. J Am Chem Soc. 2015;137(22):7063-6doi: 10.1021/jacs.5b04029.
Sun, J. K., Zhan, W. W., Akita, T., & Xu, Q. (2015). Toward Homogenization of Heterogeneous Metal Nanoparticle Catalysts with Enhanced Catalytic Performance: Soluble Porous Organic Cage as a Stabilizer and Homogenizer. Journal of the American Chemical Society, 137(22), 7063-6. https://doi.org/10.1021/jacs.5b04029
Sun, Jian-Ke, et al. "Toward Homogenization of Heterogeneous Metal Nanoparticle Catalysts with Enhanced Catalytic Performance: Soluble Porous Organic Cage as a Stabilizer and Homogenizer." Journal of the American Chemical Society vol. 137,22 (2015): 7063-6. doi: https://doi.org/10.1021/jacs.5b04029
Sun JK, Zhan WW, Akita T, Xu Q. Toward Homogenization of Heterogeneous Metal Nanoparticle Catalysts with Enhanced Catalytic Performance: Soluble Porous Organic Cage as a Stabilizer and Homogenizer. J Am Chem Soc. 2015 Jun 10;137(22):7063-6. doi: 10.1021/jacs.5b04029. Epub 2015 Jun 02. PMID: 26020572.
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Showing 1 to 12 of 1125 entries