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Determinants of quality, latency, and amount of Stack Overflow answers about recent Android APIs.

PloS one

Kavaler D, Filkov V.
PMID: 29547620
PLoS One. 2018 Mar 16;13(3):e0194139. doi: 10.1371/journal.pone.0194139. eCollection 2018.

Stack Overflow is a popular crowdsourced question and answer website for programming-related issues. It is an invaluable resource for software developers; on average, questions posted there get answered in minutes to an hour. Questions about well established topics, e.g.,...

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Kavaler D, Filkov V. Determinants of quality, latency, and amount of Stack Overflow answers about recent Android APIs. PLoS One. 2018;13(3):e0194139doi: 10.1371/journal.pone.0194139.
Kavaler, D., & Filkov, V. (2018). Determinants of quality, latency, and amount of Stack Overflow answers about recent Android APIs. PloS one, 13(3), e0194139. https://doi.org/10.1371/journal.pone.0194139
Kavaler, David, and Filkov, Vladimir. "Determinants of quality, latency, and amount of Stack Overflow answers about recent Android APIs." PloS one vol. 13,3 (2018): e0194139. doi: https://doi.org/10.1371/journal.pone.0194139
Kavaler D, Filkov V. Determinants of quality, latency, and amount of Stack Overflow answers about recent Android APIs. PLoS One. 2018 Mar 16;13(3):e0194139. doi: 10.1371/journal.pone.0194139. eCollection 2018. PMID: 29547620; PMCID: PMC5856353.
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VCF-Explorer: filtering and analysing whole genome VCF files.

Bioinformatics (Oxford, England)

Akgün M, Demirci H.
PMID: 29036499
Bioinformatics. 2017 Nov 01;33(21):3468-3470. doi: 10.1093/bioinformatics/btx422.

SUMMARY: The decreasing cost in high-throughput technologies led to a number of sequencing projects consisting of thousands of whole genomes. The paradigm shift from exome to whole genome brings a significant increase in the size of output files. Most...

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Akgün M, Demirci H. VCF-Explorer: filtering and analysing whole genome VCF files. Bioinformatics. 2017;33(21):3468-3470doi: 10.1093/bioinformatics/btx422.
Akgün, M., & Demirci, H. (2017). VCF-Explorer: filtering and analysing whole genome VCF files. Bioinformatics (Oxford, England), 33(21), 3468-3470. https://doi.org/10.1093/bioinformatics/btx422
Akgün, Mete, and Demirci, Hüseyin. "VCF-Explorer: filtering and analysing whole genome VCF files." Bioinformatics (Oxford, England) vol. 33,21 (2017): 3468-3470. doi: https://doi.org/10.1093/bioinformatics/btx422
Akgün M, Demirci H. VCF-Explorer: filtering and analysing whole genome VCF files. Bioinformatics. 2017 Nov 01;33(21):3468-3470. doi: 10.1093/bioinformatics/btx422. PMID: 29036499.
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DIVE: a graph-based visual-analytics framework for big data.

IEEE computer graphics and applications

Rysavy SJ, Bromley D, Daggett V.
PMID: 24808197
IEEE Comput Graph Appl. 2014 Mar-Apr;34(2):26-37. doi: 10.1109/MCG.2014.27.

The need for data-centric scientific tools is growing; domains such as biology, chemistry, and physics are increasingly adopting computational approaches. So, scientists must deal with the challenges of big data. To address these challenges, researchers built a visual-analytics platform...

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Rysavy SJ, Bromley D, Daggett V. DIVE: a graph-based visual-analytics framework for big data. IEEE Comput Graph Appl. 2014;34(2):26-37doi: 10.1109/MCG.2014.27.
Rysavy, S. J., Bromley, D., & Daggett, V. (2014). DIVE: a graph-based visual-analytics framework for big data. IEEE computer graphics and applications, 34(2), 26-37. https://doi.org/10.1109/MCG.2014.27
Rysavy, Steven J, et al. "DIVE: a graph-based visual-analytics framework for big data." IEEE computer graphics and applications vol. 34,2 (2014): 26-37. doi: https://doi.org/10.1109/MCG.2014.27
Rysavy SJ, Bromley D, Daggett V. DIVE: a graph-based visual-analytics framework for big data. IEEE Comput Graph Appl. 2014 Mar-Apr;34(2):26-37. doi: 10.1109/MCG.2014.27. PMID: 24808197; PMCID: PMC4103159.
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Exploratory visualization of surgical training databases for improving skill acquisition.

IEEE computer graphics and applications

Schroeder D, Kowalewski T, White L, Carlis J, Santos E, Sweet R, Lendvay TS, Reihsen T, Keefe DF.
PMID: 24807311
IEEE Comput Graph Appl. 2012 Nov-Dec;32(6):71-81. doi: 10.1109/MCG.2012.67.

A new visualization system analyzes multidimensional surgical performance databases of information collected via emerging surgical robot and simulator technologies. In particular, it has visualized force, position, rotation, and synchronized video data from 300 bimanual laparoscopic surgery tasks performed by...

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Schroeder D, Kowalewski T, White L, et al. Exploratory visualization of surgical training databases for improving skill acquisition. IEEE Comput Graph Appl. 2012;32(6):71-81doi: 10.1109/MCG.2012.67.
Schroeder, D., Kowalewski, T., White, L., Carlis, J., Santos, E., Sweet, R., Lendvay, T. S., Reihsen, T., & Keefe, D. F. (2012). Exploratory visualization of surgical training databases for improving skill acquisition. IEEE computer graphics and applications, 32(6), 71-81. https://doi.org/10.1109/MCG.2012.67
Schroeder, David, et al. "Exploratory visualization of surgical training databases for improving skill acquisition." IEEE computer graphics and applications vol. 32,6 (2012): 71-81. doi: https://doi.org/10.1109/MCG.2012.67
Schroeder D, Kowalewski T, White L, Carlis J, Santos E, Sweet R, Lendvay TS, Reihsen T, Keefe DF. Exploratory visualization of surgical training databases for improving skill acquisition. IEEE Comput Graph Appl. 2012 Nov-Dec;32(6):71-81. doi: 10.1109/MCG.2012.67. PMID: 24807311.
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Molecular dynamics: new advances in drug discovery.

European journal of medicinal chemistry

Milardi D, Pappalardo M.
PMID: 25466447
Eur J Med Chem. 2015 Feb 16;91:1-3. doi: 10.1016/j.ejmech.2014.10.078. Epub 2014 Nov 01.

No abstract available.

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Milardi D, Pappalardo M. Molecular dynamics: new advances in drug discovery. Eur J Med Chem. 2014;91:1-3doi: 10.1016/j.ejmech.2014.10.078.
Milardi, D., & Pappalardo, M. (2015). Molecular dynamics: new advances in drug discovery. European journal of medicinal chemistry, 911-3. https://doi.org/10.1016/j.ejmech.2014.10.078
Milardi, Danilo, and Pappalardo, Matteo. "Molecular dynamics: new advances in drug discovery." European journal of medicinal chemistry vol. 91 (2015): 1-3. doi: https://doi.org/10.1016/j.ejmech.2014.10.078
Milardi D, Pappalardo M. Molecular dynamics: new advances in drug discovery. Eur J Med Chem. 2015 Feb 16;91:1-3. doi: 10.1016/j.ejmech.2014.10.078. Epub 2014 Nov 01. PMID: 25466447.
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Novel 3D/VR interactive environment for MD simulations, visualization and analysis.

Journal of visualized experiments : JoVE

Doblack BN, Allis T, Dávila LP.
PMID: 25549300
J Vis Exp. 2014 Dec 18;(94). doi: 10.3791/51384.

The increasing development of computing (hardware and software) in the last decades has impacted scientific research in many fields including materials science, biology, chemistry and physics among many others. A new computational system for the accurate and fast simulation...

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Doblack BN, Allis T, Dávila LP. Novel 3D/VR interactive environment for MD simulations, visualization and analysis. J Vis Exp. 2014;(94)doi: 10.3791/51384.
Doblack, B. N., Allis, T., & Dávila, L. P. (2014). Novel 3D/VR interactive environment for MD simulations, visualization and analysis. Journal of visualized experiments : JoVE, (94), . https://doi.org/10.3791/51384
Doblack, Benjamin N, et al. "Novel 3D/VR interactive environment for MD simulations, visualization and analysis." Journal of visualized experiments : JoVE vol. ,94 (2014). doi: https://doi.org/10.3791/51384
Doblack BN, Allis T, Dávila LP. Novel 3D/VR interactive environment for MD simulations, visualization and analysis. J Vis Exp. 2014 Dec 18;(94). doi: 10.3791/51384. PMID: 25549300; PMCID: PMC4396941.
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3D for the Web.

IEEE computer graphics and applications

Macedonia M.
PMID: 24921099
IEEE Comput Graph Appl. 2013 Sep-Oct;33(5):24-5. doi: 10.1109/mcg.2013.69.

No abstract available.

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Macedonia M. 3D for the Web. IEEE Comput Graph Appl. 2013;33(5):24-5doi: 10.1109/mcg.2013.69.
Macedonia, M. (2013). 3D for the Web. IEEE computer graphics and applications, 33(5), 24-5. https://doi.org/10.1109/mcg.2013.69
Macedonia, Michael. "3D for the Web." IEEE computer graphics and applications vol. 33,5 (2013): 24-5. doi: https://doi.org/10.1109/mcg.2013.69
Macedonia M. 3D for the Web. IEEE Comput Graph Appl. 2013 Sep-Oct;33(5):24-5. doi: 10.1109/mcg.2013.69. PMID: 24921099.
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Detection of gene annotations and protein-protein interaction associated disorders through transitive relationships between integrated annotations.

BMC genomics

Masseroli M, Canakoglu A, Quigliatti M.
PMID: 26046679
BMC Genomics. 2015;16:S5. doi: 10.1186/1471-2164-16-S6-S5. Epub 2015 Jun 01.

BACKGROUND: Increasingly high amounts of heterogeneous and valuable controlled biomolecular annotations are available, but far from exhaustive and scattered in many databases. Several annotation integration and prediction approaches have been proposed, but these issues are still unsolved. We previously...

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Masseroli M, Canakoglu A, Quigliatti M. Detection of gene annotations and protein-protein interaction associated disorders through transitive relationships between integrated annotations. BMC Genomics. 2015;16:S5doi: 10.1186/1471-2164-16-S6-S5.
Masseroli, M., Canakoglu, A., & Quigliatti, M. (2015). Detection of gene annotations and protein-protein interaction associated disorders through transitive relationships between integrated annotations. BMC genomics, 16S5. https://doi.org/10.1186/1471-2164-16-S6-S5
Masseroli, Marco, et al. "Detection of gene annotations and protein-protein interaction associated disorders through transitive relationships between integrated annotations." BMC genomics vol. 16 (2015): S5. doi: https://doi.org/10.1186/1471-2164-16-S6-S5
Masseroli M, Canakoglu A, Quigliatti M. Detection of gene annotations and protein-protein interaction associated disorders through transitive relationships between integrated annotations. BMC Genomics. 2015;16:S5. doi: 10.1186/1471-2164-16-S6-S5. Epub 2015 Jun 01. PMID: 26046679; PMCID: PMC4460591.
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Exploring personalized searches using tag-based user profiles and resource profiles in folksonomy.

Neural networks : the official journal of the International Neural Network Society

Cai Y, Li Q, Xie H, Min H.
PMID: 24939833
Neural Netw. 2014 Oct;58:98-110. doi: 10.1016/j.neunet.2014.05.017. Epub 2014 Jun 04.

With the increase in resource-sharing websites such as YouTube and Flickr, many shared resources have arisen on the Web. Personalized searches have become more important and challenging since users demand higher retrieval quality. To achieve this goal, personalized searches...

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Cai Y, Li Q, Xie H, et al. Exploring personalized searches using tag-based user profiles and resource profiles in folksonomy. Neural Netw. 2014;58:98-110doi: 10.1016/j.neunet.2014.05.017.
Cai, Y., Li, Q., Xie, H., & Min, H. (2014). Exploring personalized searches using tag-based user profiles and resource profiles in folksonomy. Neural networks : the official journal of the International Neural Network Society, 5898-110. https://doi.org/10.1016/j.neunet.2014.05.017
Cai, Yi, et al. "Exploring personalized searches using tag-based user profiles and resource profiles in folksonomy." Neural networks : the official journal of the International Neural Network Society vol. 58 (2014): 98-110. doi: https://doi.org/10.1016/j.neunet.2014.05.017
Cai Y, Li Q, Xie H, Min H. Exploring personalized searches using tag-based user profiles and resource profiles in folksonomy. Neural Netw. 2014 Oct;58:98-110. doi: 10.1016/j.neunet.2014.05.017. Epub 2014 Jun 04. PMID: 24939833.
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Improving the Acquisition of Basic Technical Surgical Skills with VR-Based Simulation Coupled with Computer-Based Video Instruction.

Studies in health technology and informatics

Rojas D, Kapralos B, Dubrowski A.
PMID: 27046599
Stud Health Technol Inform. 2016;220:323-8.

Next to practice, feedback is the most important variable in skill acquisition. Feedback can vary in content and the way that it is used for delivery. Health professions education research has extensively examined the different effects provided by the...

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Rojas D, Kapralos B, Dubrowski A. Improving the Acquisition of Basic Technical Surgical Skills with VR-Based Simulation Coupled with Computer-Based Video Instruction. Stud Health Technol Inform. 2016;220:323-8
Rojas, D., Kapralos, B., & Dubrowski, A. (2016). Improving the Acquisition of Basic Technical Surgical Skills with VR-Based Simulation Coupled with Computer-Based Video Instruction. Studies in health technology and informatics, 220323-8.
Rojas, David, et al. "Improving the Acquisition of Basic Technical Surgical Skills with VR-Based Simulation Coupled with Computer-Based Video Instruction." Studies in health technology and informatics vol. 220 (2016): 323-8.
Rojas D, Kapralos B, Dubrowski A. Improving the Acquisition of Basic Technical Surgical Skills with VR-Based Simulation Coupled with Computer-Based Video Instruction. Stud Health Technol Inform. 2016;220:323-8. PMID: 27046599.
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Towards surgeon-authored VR training: the scene-development cycle.

Studies in health technology and informatics

Dindar S, Nguyen T, Peters J.
PMID: 27046561
Stud Health Technol Inform. 2016;220:103-9.

Enabling surgeon-educators to themselves create virtual reality (VR) training units promises greater variety, specialization, and relevance of the units. This paper describes a software bridge that semi-automates the scene-generation cycle, a key bottleneck in authoring, modeling, and developing VR...

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Dindar S, Nguyen T, Peters J. Towards surgeon-authored VR training: the scene-development cycle. Stud Health Technol Inform. 2016;220:103-9
Dindar, S., Nguyen, T., & Peters, J. (2016). Towards surgeon-authored VR training: the scene-development cycle. Studies in health technology and informatics, 220103-9.
Dindar, Saleh, et al. "Towards surgeon-authored VR training: the scene-development cycle." Studies in health technology and informatics vol. 220 (2016): 103-9.
Dindar S, Nguyen T, Peters J. Towards surgeon-authored VR training: the scene-development cycle. Stud Health Technol Inform. 2016;220:103-9. PMID: 27046561.
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Pladipus Enables Universal Distributed Computing in Proteomics Bioinformatics.

Journal of proteome research

Verheggen K, Maddelein D, Hulstaert N, Martens L, Barsnes H, Vaudel M.
PMID: 26510693
J Proteome Res. 2016 Mar 04;15(3):707-12. doi: 10.1021/acs.jproteome.5b00850. Epub 2015 Nov 06.

The use of proteomics bioinformatics substantially contributes to an improved understanding of proteomes, but this novel and in-depth knowledge comes at the cost of increased computational complexity. Parallelization across multiple computers, a strategy termed distributed computing, can be used...

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Verheggen K, Maddelein D, Hulstaert N, et al. Pladipus Enables Universal Distributed Computing in Proteomics Bioinformatics. J Proteome Res. 2015;15(3):707-12doi: 10.1021/acs.jproteome.5b00850.
Verheggen, K., Maddelein, D., Hulstaert, N., Martens, L., Barsnes, H., & Vaudel, M. (2016). Pladipus Enables Universal Distributed Computing in Proteomics Bioinformatics. Journal of proteome research, 15(3), 707-12. https://doi.org/10.1021/acs.jproteome.5b00850
Verheggen, Kenneth, et al. "Pladipus Enables Universal Distributed Computing in Proteomics Bioinformatics." Journal of proteome research vol. 15,3 (2016): 707-12. doi: https://doi.org/10.1021/acs.jproteome.5b00850
Verheggen K, Maddelein D, Hulstaert N, Martens L, Barsnes H, Vaudel M. Pladipus Enables Universal Distributed Computing in Proteomics Bioinformatics. J Proteome Res. 2016 Mar 04;15(3):707-12. doi: 10.1021/acs.jproteome.5b00850. Epub 2015 Nov 06. PMID: 26510693.
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Showing 13 to 24 of 1209 entries