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Showing 25 to 36 of 1480 entries
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Order from chaos in the nucleus.

Molecular cell

Xu Z, Felsenfeld G.
PMID: 23141201
Mol Cell. 2012 Nov 09;48(3):327-8. doi: 10.1016/j.molcel.2012.10.021.

Although it might appear that chromatin is randomly packed within the nucleus, recent data (Hou et al., 2012, in this issue of Molecular Cell) show that it is organized into defined and functionally important domains marked by preferred intradomain...

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Xu Z, Felsenfeld G. Order from chaos in the nucleus. Mol Cell. 2012;48(3):327-8doi: 10.1016/j.molcel.2012.10.021.
Xu, Z., & Felsenfeld, G. (2012). Order from chaos in the nucleus. Molecular cell, 48(3), 327-8. https://doi.org/10.1016/j.molcel.2012.10.021
Xu, Zhixiong, and Felsenfeld, Gary. "Order from chaos in the nucleus." Molecular cell vol. 48,3 (2012): 327-8. doi: https://doi.org/10.1016/j.molcel.2012.10.021
Xu Z, Felsenfeld G. Order from chaos in the nucleus. Mol Cell. 2012 Nov 09;48(3):327-8. doi: 10.1016/j.molcel.2012.10.021. PMID: 23141201; PMCID: PMC3500885.
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PubTator: a web-based text mining tool for assisting biocuration.

Nucleic acids research

Wei CH, Kao HY, Lu Z.
PMID: 23703206
Nucleic Acids Res. 2013 Jul;41:W518-22. doi: 10.1093/nar/gkt441. Epub 2013 May 22.

Manually curating knowledge from biomedical literature into structured databases is highly expensive and time-consuming, making it difficult to keep pace with the rapid growth of the literature. There is therefore a pressing need to assist biocuration with automated text...

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Wei CH, Kao HY, Lu Z. PubTator: a web-based text mining tool for assisting biocuration. Nucleic Acids Res. 2013;41:W518-22doi: 10.1093/nar/gkt441.
Wei, C. H., Kao, H. Y., & Lu, Z. (2013). PubTator: a web-based text mining tool for assisting biocuration. Nucleic acids research, 41W518-22. https://doi.org/10.1093/nar/gkt441
Wei, Chih-Hsuan, et al. "PubTator: a web-based text mining tool for assisting biocuration." Nucleic acids research vol. 41 (2013): W518-22. doi: https://doi.org/10.1093/nar/gkt441
Wei CH, Kao HY, Lu Z. PubTator: a web-based text mining tool for assisting biocuration. Nucleic Acids Res. 2013 Jul;41:W518-22. doi: 10.1093/nar/gkt441. Epub 2013 May 22. PMID: 23703206; PMCID: PMC3692066.
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Understanding the somatic consequences of depression: biological mechanisms and the role of depression symptom profile.

BMC medicine

Penninx BW, Milaneschi Y, Lamers F, Vogelzangs N.
PMID: 23672628
BMC Med. 2013 May 15;11:129. doi: 10.1186/1741-7015-11-129.

Depression is the most common psychiatric disorder worldwide. The burden of disease for depression goes beyond functioning and quality of life and extends to somatic health. Depression has been shown to subsequently increase the risk of, for example, cardiovascular,...

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Penninx BW, Milaneschi Y, Lamers F, et al. Understanding the somatic consequences of depression: biological mechanisms and the role of depression symptom profile. BMC Med. 2013;11:129doi: 10.1186/1741-7015-11-129.
Penninx, B. W., Milaneschi, Y., Lamers, F., & Vogelzangs, N. (2013). Understanding the somatic consequences of depression: biological mechanisms and the role of depression symptom profile. BMC medicine, 11129. https://doi.org/10.1186/1741-7015-11-129
Penninx, Brenda W J H, et al. "Understanding the somatic consequences of depression: biological mechanisms and the role of depression symptom profile." BMC medicine vol. 11 (2013): 129. doi: https://doi.org/10.1186/1741-7015-11-129
Penninx BW, Milaneschi Y, Lamers F, Vogelzangs N. Understanding the somatic consequences of depression: biological mechanisms and the role of depression symptom profile. BMC Med. 2013 May 15;11:129. doi: 10.1186/1741-7015-11-129. PMID: 23672628; PMCID: PMC3661358.
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The relationship between physical activity, functional performance and fatigue in sarcoidosis.

Journal of clinical nursing

Saligan LN.
PMID: 24460760
J Clin Nurs. 2014 Aug;23(15):2376-8. doi: 10.1111/jocn.12490. Epub 2014 Jan 27.

No abstract available.

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Saligan LN. The relationship between physical activity, functional performance and fatigue in sarcoidosis. J Clin Nurs. 2014;23(15):2376-8doi: 10.1111/jocn.12490.
Saligan, L. N. (2014). The relationship between physical activity, functional performance and fatigue in sarcoidosis. Journal of clinical nursing, 23(15), 2376-8. https://doi.org/10.1111/jocn.12490
Saligan, Leorey N. "The relationship between physical activity, functional performance and fatigue in sarcoidosis." Journal of clinical nursing vol. 23,15 (2014): 2376-8. doi: https://doi.org/10.1111/jocn.12490
Saligan LN. The relationship between physical activity, functional performance and fatigue in sarcoidosis. J Clin Nurs. 2014 Aug;23(15):2376-8. doi: 10.1111/jocn.12490. Epub 2014 Jan 27. PMID: 24460760; PMCID: PMC4107129.
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Ogino et Al. Respond to "the 21st century epidemiologist".

American journal of epidemiology

Ogino S, Beck AH, King EE, Sherman ME, Milner DA, Giovannucci E.
PMID: 22935516
Am J Epidemiol. 2012 Oct 15;176(8):672-4. doi: 10.1093/aje/kws229. Epub 2012 Aug 30.

No abstract available.

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Ogino S, Beck AH, King EE, et al. Ogino et Al. Respond to "the 21st century epidemiologist". Am J Epidemiol. 2012;176(8):672-4doi: 10.1093/aje/kws229.
Ogino, S., Beck, A. H., King, E. E., Sherman, M. E., Milner, D. A., & Giovannucci, E. (2012). Ogino et Al. Respond to "the 21st century epidemiologist". American journal of epidemiology, 176(8), 672-4. https://doi.org/10.1093/aje/kws229
Ogino, Shuji, et al. "Ogino et Al. Respond to "the 21st century epidemiologist"." American journal of epidemiology vol. 176,8 (2012): 672-4. doi: https://doi.org/10.1093/aje/kws229
Ogino S, Beck AH, King EE, Sherman ME, Milner DA, Giovannucci E. Ogino et Al. Respond to "the 21st century epidemiologist". Am J Epidemiol. 2012 Oct 15;176(8):672-4. doi: 10.1093/aje/kws229. Epub 2012 Aug 30. PMID: 22935516; PMCID: PMC3571249.
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Interdisciplinary education to integrate pathology and epidemiology: towards molecular and population-level health science.

American journal of epidemiology

Ogino S, King EE, Beck AH, Sherman ME, Milner DA, Giovannucci E.
PMID: 22935517
Am J Epidemiol. 2012 Oct 15;176(8):659-67. doi: 10.1093/aje/kws226. Epub 2012 Aug 30.

In recent decades, epidemiology, public health, and medical sciences have been increasingly compartmentalized into narrower disciplines. The authors recognize the value of integration of divergent scientific fields in order to create new methods, concepts, paradigms, and knowledge. Herein they...

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Ogino S, King EE, Beck AH, et al. Interdisciplinary education to integrate pathology and epidemiology: towards molecular and population-level health science. Am J Epidemiol. 2012;176(8):659-67doi: 10.1093/aje/kws226.
Ogino, S., King, E. E., Beck, A. H., Sherman, M. E., Milner, D. A., & Giovannucci, E. (2012). Interdisciplinary education to integrate pathology and epidemiology: towards molecular and population-level health science. American journal of epidemiology, 176(8), 659-67. https://doi.org/10.1093/aje/kws226
Ogino, Shuji, et al. "Interdisciplinary education to integrate pathology and epidemiology: towards molecular and population-level health science." American journal of epidemiology vol. 176,8 (2012): 659-67. doi: https://doi.org/10.1093/aje/kws226
Ogino S, King EE, Beck AH, Sherman ME, Milner DA, Giovannucci E. Interdisciplinary education to integrate pathology and epidemiology: towards molecular and population-level health science. Am J Epidemiol. 2012 Oct 15;176(8):659-67. doi: 10.1093/aje/kws226. Epub 2012 Aug 30. PMID: 22935517; PMCID: PMC3571252.
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Endoscopic molecular imaging of cancer.

Future oncology (London, England)

Ali T, Choyke PL, Kobayashi H.
PMID: 24106901
Future Oncol. 2013 Oct;9(10):1501-13. doi: 10.2217/fon.13.123.

White light endoscopy has proven to be a very powerful tool in oncology. There is still, however, a need for better endoscopic techniques to overcome the current limitations of white light optics. New technologies that allow higher sensitivity, improved...

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Ali T, Choyke PL, Kobayashi H. Endoscopic molecular imaging of cancer. Future Oncol. 2013;9(10):1501-13doi: 10.2217/fon.13.123.
Ali, T., Choyke, P. L., & Kobayashi, H. (2013). Endoscopic molecular imaging of cancer. Future oncology (London, England), 9(10), 1501-13. https://doi.org/10.2217/fon.13.123
Ali, Towhid, et al. "Endoscopic molecular imaging of cancer." Future oncology (London, England) vol. 9,10 (2013): 1501-13. doi: https://doi.org/10.2217/fon.13.123
Ali T, Choyke PL, Kobayashi H. Endoscopic molecular imaging of cancer. Future Oncol. 2013 Oct;9(10):1501-13. doi: 10.2217/fon.13.123. PMID: 24106901; PMCID: PMC7537976.
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Interaction and exposure modification: are we asking the right questions?.

American journal of epidemiology

Weinberg CR.
PMID: 22306562
Am J Epidemiol. 2012 Apr 01;175(7):602-5. doi: 10.1093/aje/kwr495. Epub 2012 Feb 03.

Most diseases arise not purely through genetic abnormalities nor purely through environmental causes, but as "complex" conditions brought about by the combined effects of genetic susceptibility factors, nongenetic experiences and exposures, and bad luck. Finding simple models capable of...

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Weinberg CR. Interaction and exposure modification: are we asking the right questions?. Am J Epidemiol. 2012;175(7):602-5doi: 10.1093/aje/kwr495.
Weinberg, C. R. (2012). Interaction and exposure modification: are we asking the right questions?. American journal of epidemiology, 175(7), 602-5. https://doi.org/10.1093/aje/kwr495
Weinberg, Clarice R. "Interaction and exposure modification: are we asking the right questions?." American journal of epidemiology vol. 175,7 (2012): 602-5. doi: https://doi.org/10.1093/aje/kwr495
Weinberg CR. Interaction and exposure modification: are we asking the right questions?. Am J Epidemiol. 2012 Apr 01;175(7):602-5. doi: 10.1093/aje/kwr495. Epub 2012 Feb 03. PMID: 22306562; PMCID: PMC3324436.
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Epigenetic priming of both tumor and NK cells augments antibody-dependent cellular cytotoxicity elicited by the anti-PD-L1 antibody avelumab against multiple carcinoma cell types.

Oncoimmunology

Hicks KC, Fantini M, Donahue RN, Schwab A, Knudson KM, Tritsch SR, Jochems C, Clavijo PE, Allen CT, Hodge JW, Tsang KY, Schlom J, Gameiro SR.
PMID: 30377559
Oncoimmunology. 2018 Jul 30;7(11):e1466018. doi: 10.1080/2162402X.2018.1466018. eCollection 2018.

Checkpoint inhibitors targeting the PD-1/PD-L1 axis are promising immunotherapies shown to elicit objective responses against multiple tumor types, yet these agents fail to benefit most patients with carcinomas. This highlights the need to develop effective therapeutic strategies to increase...

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Hicks KC, Fantini M, Donahue RN, et al. Epigenetic priming of both tumor and NK cells augments antibody-dependent cellular cytotoxicity elicited by the anti-PD-L1 antibody avelumab against multiple carcinoma cell types. Oncoimmunology. 2018;7(11):e1466018doi: 10.1080/2162402X.2018.1466018.
Hicks, K. C., Fantini, M., Donahue, R. N., Schwab, A., Knudson, K. M., Tritsch, S. R., Jochems, C., Clavijo, P. E., Allen, C. T., Hodge, J. W., Tsang, K. Y., Schlom, J., & Gameiro, S. R. (2018). Epigenetic priming of both tumor and NK cells augments antibody-dependent cellular cytotoxicity elicited by the anti-PD-L1 antibody avelumab against multiple carcinoma cell types. Oncoimmunology, 7(11), e1466018. https://doi.org/10.1080/2162402X.2018.1466018
Hicks, Kristin C, et al. "Epigenetic priming of both tumor and NK cells augments antibody-dependent cellular cytotoxicity elicited by the anti-PD-L1 antibody avelumab against multiple carcinoma cell types." Oncoimmunology vol. 7,11 (2018): e1466018. doi: https://doi.org/10.1080/2162402X.2018.1466018
Hicks KC, Fantini M, Donahue RN, Schwab A, Knudson KM, Tritsch SR, Jochems C, Clavijo PE, Allen CT, Hodge JW, Tsang KY, Schlom J, Gameiro SR. Epigenetic priming of both tumor and NK cells augments antibody-dependent cellular cytotoxicity elicited by the anti-PD-L1 antibody avelumab against multiple carcinoma cell types. Oncoimmunology. 2018 Jul 30;7(11):e1466018. doi: 10.1080/2162402X.2018.1466018. eCollection 2018. PMID: 30377559; PMCID: PMC6205056.
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M7824, a novel bifunctional anti-PD-L1/TGFβ Trap fusion protein, promotes anti-tumor efficacy as monotherapy and in combination with vaccine.

Oncoimmunology

Knudson KM, Hicks KC, Luo X, Chen JQ, Schlom J, Gameiro SR.
PMID: 29721396
Oncoimmunology. 2018 Feb 14;7(5):e1426519. doi: 10.1080/2162402X.2018.1426519. eCollection 2018.

Tumors evade host immune surveillance through multiple mechanisms, including the generation of a tumor microenvironment that suppresses immune effector function. Secretion of TGFβ and upregulation of immune checkpoint programmed cell death ligand-1 (PD-L1) are two main contributors to immune...

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Knudson KM, Hicks KC, Luo X, et al. M7824, a novel bifunctional anti-PD-L1/TGFβ Trap fusion protein, promotes anti-tumor efficacy as monotherapy and in combination with vaccine. Oncoimmunology. 2018;7(5):e1426519doi: 10.1080/2162402X.2018.1426519.
Knudson, K. M., Hicks, K. C., Luo, X., Chen, J. Q., Schlom, J., & Gameiro, S. R. (2018). M7824, a novel bifunctional anti-PD-L1/TGFβ Trap fusion protein, promotes anti-tumor efficacy as monotherapy and in combination with vaccine. Oncoimmunology, 7(5), e1426519. https://doi.org/10.1080/2162402X.2018.1426519
Knudson, Karin M, et al. "M7824, a novel bifunctional anti-PD-L1/TGFβ Trap fusion protein, promotes anti-tumor efficacy as monotherapy and in combination with vaccine." Oncoimmunology vol. 7,5 (2018): e1426519. doi: https://doi.org/10.1080/2162402X.2018.1426519
Knudson KM, Hicks KC, Luo X, Chen JQ, Schlom J, Gameiro SR. M7824, a novel bifunctional anti-PD-L1/TGFβ Trap fusion protein, promotes anti-tumor efficacy as monotherapy and in combination with vaccine. Oncoimmunology. 2018 Feb 14;7(5):e1426519. doi: 10.1080/2162402X.2018.1426519. eCollection 2018. PMID: 29721396; PMCID: PMC5927523.
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Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates.

Antimicrobial agents and chemotherapy

Feldgarden M, Brover V, Haft DH, Prasad AB, Slotta DJ, Tolstoy I, Tyson GH, Zhao S, Hsu CH, McDermott PF, Tadesse DA, Morales C, Simmons M, Tillman G, Wasilenko J, Folster JP, Klimke W.
PMID: 31427293
Antimicrob Agents Chemother. 2019 Oct 22;63(11). doi: 10.1128/AAC.00483-19. Print 2019 Nov.

Antimicrobial resistance (AMR) is a major public health problem that requires publicly available tools for rapid analysis. To identify AMR genes in whole-genome sequences, the National Center for Biotechnology Information (NCBI) has produced AMRFinder, a tool that identifies AMR...

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Feldgarden M, Brover V, Haft DH, et al. Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates. Antimicrob Agents Chemother. 2019;63(11)doi: 10.1128/AAC.00483-19.
Feldgarden, M., Brover, V., Haft, D. H., Prasad, A. B., Slotta, D. J., Tolstoy, I., Tyson, G. H., Zhao, S., Hsu, C. H., McDermott, P. F., Tadesse, D. A., Morales, C., Simmons, M., Tillman, G., Wasilenko, J., Folster, J. P., & Klimke, W. (2019). Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates. Antimicrobial agents and chemotherapy, 63(11), . https://doi.org/10.1128/AAC.00483-19
Feldgarden, Michael, et al. "Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates." Antimicrobial agents and chemotherapy vol. 63,11 (2019). doi: https://doi.org/10.1128/AAC.00483-19
Feldgarden M, Brover V, Haft DH, Prasad AB, Slotta DJ, Tolstoy I, Tyson GH, Zhao S, Hsu CH, McDermott PF, Tadesse DA, Morales C, Simmons M, Tillman G, Wasilenko J, Folster JP, Klimke W. Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates. Antimicrob Agents Chemother. 2019 Oct 22;63(11). doi: 10.1128/AAC.00483-19. Print 2019 Nov. PMID: 31427293; PMCID: PMC6811410.
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PubMed Phrases, an open set of coherent phrases for searching biomedical literature.

Scientific data

Kim S, Yeganova L, Comeau DC, Wilbur WJ, Lu Z.
PMID: 29893755
Sci Data. 2018 Jun 12;5:180104. doi: 10.1038/sdata.2018.104.

In biomedicine, key concepts are often expressed by multiple words (e.g., 'zinc finger protein'). Previous work has shown treating a sequence of words as a meaningful unit, where applicable, is not only important for human understanding but also beneficial...

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Kim S, Yeganova L, Comeau DC, et al. PubMed Phrases, an open set of coherent phrases for searching biomedical literature. Sci Data. 2018;5:180104doi: 10.1038/sdata.2018.104.
Kim, S., Yeganova, L., Comeau, D. C., Wilbur, W. J., & Lu, Z. (2018). PubMed Phrases, an open set of coherent phrases for searching biomedical literature. Scientific data, 5180104. https://doi.org/10.1038/sdata.2018.104
Kim, Sun, et al. "PubMed Phrases, an open set of coherent phrases for searching biomedical literature." Scientific data vol. 5 (2018): 180104. doi: https://doi.org/10.1038/sdata.2018.104
Kim S, Yeganova L, Comeau DC, Wilbur WJ, Lu Z. PubMed Phrases, an open set of coherent phrases for searching biomedical literature. Sci Data. 2018 Jun 12;5:180104. doi: 10.1038/sdata.2018.104. PMID: 29893755; PMCID: PMC5996850.
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Showing 25 to 36 of 1480 entries