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The induction of pyrenoid synthesis by hyperoxia and its implications for the natural diversity of photosynthetic responses in .

eLife

Neofotis P, Temple J, Tessmer OL, Bibik J, Norris N, Pollner E, Lucker B, Weraduwage SM, Withrow A, Sears B, Mogos G, Frame M, Hall D, Weissman J, Kramer DM.
PMID: 34936552
Elife. 2021 Dec 22;10. doi: 10.7554/eLife.67565.

In algae, it is well established that the pyrenoid, a component of the carbon-concentrating mechanism (CCM), is essential for efficient photosynthesis at low CO

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Neofotis P, Temple J, Tessmer OL, et al. The induction of pyrenoid synthesis by hyperoxia and its implications for the natural diversity of photosynthetic responses in . Elife. 2021;10doi: 10.7554/eLife.67565.
Neofotis, P., Temple, J., Tessmer, O. L., Bibik, J., Norris, N., Pollner, E., Lucker, B., Weraduwage, S. M., Withrow, A., Sears, B., Mogos, G., Frame, M., Hall, D., Weissman, J., & Kramer, D. M. (2021). The induction of pyrenoid synthesis by hyperoxia and its implications for the natural diversity of photosynthetic responses in . eLife, 10. https://doi.org/10.7554/eLife.67565
Neofotis, Peter, et al. "The induction of pyrenoid synthesis by hyperoxia and its implications for the natural diversity of photosynthetic responses in ." eLife vol. 10 (2021). doi: https://doi.org/10.7554/eLife.67565
Neofotis P, Temple J, Tessmer OL, Bibik J, Norris N, Pollner E, Lucker B, Weraduwage SM, Withrow A, Sears B, Mogos G, Frame M, Hall D, Weissman J, Kramer DM. The induction of pyrenoid synthesis by hyperoxia and its implications for the natural diversity of photosynthetic responses in . Elife. 2021 Dec 22;10. doi: 10.7554/eLife.67565. PMID: 34936552.
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Sputtered Sr.

ACS applied materials & interfaces

Roth J, Paul A, Goldner N, Pogrebnyakov A, Agueda K, Birol T, Alem N, Engel-Herbert R.
PMID: 32515187
ACS Appl Mater Interfaces. 2020 Jul 08;12(27):30520-30529. doi: 10.1021/acsami.0c04854. Epub 2020 Jun 25.

Expanding the application space of transparent electrodes toward the ultraviolet range has been found challenging when utilizing the conventional approach to degenerately dope semiconductors with band gaps larger than ZnO or In

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Roth J, Paul A, Goldner N, et al. Sputtered Sr. ACS Appl Mater Interfaces. 2020;12(27):30520-30529doi: 10.1021/acsami.0c04854.
Roth, J., Paul, A., Goldner, N., Pogrebnyakov, A., Agueda, K., Birol, T., Alem, N., & Engel-Herbert, R. (2020). Sputtered Sr. ACS applied materials & interfaces, 12(27), 30520-30529. https://doi.org/10.1021/acsami.0c04854
Roth, Joseph, et al. "Sputtered Sr." ACS applied materials & interfaces vol. 12,27 (2020): 30520-30529. doi: https://doi.org/10.1021/acsami.0c04854
Roth J, Paul A, Goldner N, Pogrebnyakov A, Agueda K, Birol T, Alem N, Engel-Herbert R. Sputtered Sr. ACS Appl Mater Interfaces. 2020 Jul 08;12(27):30520-30529. doi: 10.1021/acsami.0c04854. Epub 2020 Jun 25. PMID: 32515187.
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Sequentially calibrating a Bayesian microsimulation model to incorporate new information and assumptions.

BMC medical informatics and decision making

DeYoreo M, Rutter CM, Ozik J, Collier N.
PMID: 35022005
BMC Med Inform Decis Mak. 2022 Jan 12;22(1):12. doi: 10.1186/s12911-021-01726-0.

BACKGROUND: Microsimulation models are mathematical models that simulate event histories for individual members of a population. They are useful for policy decisions because they simulate a large number of individuals from an idealized population, with features that change over...

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DeYoreo M, Rutter CM, Ozik J, et al. Sequentially calibrating a Bayesian microsimulation model to incorporate new information and assumptions. BMC Med Inform Decis Mak. 2022;22(1):12doi: 10.1186/s12911-021-01726-0.
DeYoreo, M., Rutter, C. M., Ozik, J., & Collier, N. (2022). Sequentially calibrating a Bayesian microsimulation model to incorporate new information and assumptions. BMC medical informatics and decision making, 22(1), 12. https://doi.org/10.1186/s12911-021-01726-0
DeYoreo, Maria, et al. "Sequentially calibrating a Bayesian microsimulation model to incorporate new information and assumptions." BMC medical informatics and decision making vol. 22,1 (2022): 12. doi: https://doi.org/10.1186/s12911-021-01726-0
DeYoreo M, Rutter CM, Ozik J, Collier N. Sequentially calibrating a Bayesian microsimulation model to incorporate new information and assumptions. BMC Med Inform Decis Mak. 2022 Jan 12;22(1):12. doi: 10.1186/s12911-021-01726-0. PMID: 35022005.
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Reopening California : Seeking Robust, Non-Dominated COVID-19 Exit Strategies.

medRxiv : the preprint server for health sciences

de Lima PN, Lempert R, Vardavas R, Baker L, Ringel J, Rutter CM, Ozik J, Collier N.
PMID: 33948599
medRxiv. 2021 Apr 28; doi: 10.1101/2021.04.26.21256105.

Amid global scarcity of COVID-19 vaccines and the threat of new variant strains, California and other jurisdictions face the question of when and how to implement and relax COVID-19 Nonpharmaceutical Interventions (NPIs). While policymakers have attempted to balance the...

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de Lima PN, Lempert R, Vardavas R, et al. Reopening California : Seeking Robust, Non-Dominated COVID-19 Exit Strategies. medRxiv. 2021;doi: 10.1101/2021.04.26.21256105.
de Lima, P. N., Lempert, R., Vardavas, R., Baker, L., Ringel, J., Rutter, C. M., Ozik, J., & Collier, N. (2021). Reopening California : Seeking Robust, Non-Dominated COVID-19 Exit Strategies. medRxiv : the preprint server for health sciences, . https://doi.org/10.1101/2021.04.26.21256105
de Lima, Pedro Nascimento, et al. "Reopening California : Seeking Robust, Non-Dominated COVID-19 Exit Strategies." medRxiv : the preprint server for health sciences vol. (2021). doi: https://doi.org/10.1101/2021.04.26.21256105
de Lima PN, Lempert R, Vardavas R, Baker L, Ringel J, Rutter CM, Ozik J, Collier N. Reopening California : Seeking Robust, Non-Dominated COVID-19 Exit Strategies. medRxiv. 2021 Apr 28; doi: 10.1101/2021.04.26.21256105. PMID: 33948599; PMCID: PMC8095206.
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An uncertainty budget for trace analysis by isotope-dilution ICP-MS with proper consideration of correlation.

Analytical and bioanalytical chemistry

Moser J, Wegscheider W, Meisel T, Fellner N.
PMID: 12898118
Anal Bioanal Chem. 2003 Sep;377(1):97-110. doi: 10.1007/s00216-003-2028-5. Epub 2003 Aug 01.

Isotope-dilution mass spectrometry (IDMS) is considered to be a method without significant correction factors. It is also believed that this method is well understood. But unfortunately a large number of different uncertainty budgets have been published that consider different...

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Moser J, Wegscheider W, Meisel T, et al. An uncertainty budget for trace analysis by isotope-dilution ICP-MS with proper consideration of correlation. Anal Bioanal Chem. 2003;377(1):97-110doi: 10.1007/s00216-003-2028-5.
Moser, J., Wegscheider, W., Meisel, T., & Fellner, N. (2003). An uncertainty budget for trace analysis by isotope-dilution ICP-MS with proper consideration of correlation. Analytical and bioanalytical chemistry, 377(1), 97-110. https://doi.org/10.1007/s00216-003-2028-5
Moser, J, et al. "An uncertainty budget for trace analysis by isotope-dilution ICP-MS with proper consideration of correlation." Analytical and bioanalytical chemistry vol. 377,1 (2003): 97-110. doi: https://doi.org/10.1007/s00216-003-2028-5
Moser J, Wegscheider W, Meisel T, Fellner N. An uncertainty budget for trace analysis by isotope-dilution ICP-MS with proper consideration of correlation. Anal Bioanal Chem. 2003 Sep;377(1):97-110. doi: 10.1007/s00216-003-2028-5. Epub 2003 Aug 01. PMID: 12898118.
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Letter: Career decisions.

JAMA

Pollner P.
PMID: 1242760
JAMA. 1975 Dec 29;234(13):1318-9. doi: 10.1001/jama.1975.03260260022004.

No abstract available.

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Pollner P. Letter: Career decisions. JAMA. 1975;234(13):1318-9doi: 10.1001/jama.1975.03260260022004.
Pollner, P. (1975). Letter: Career decisions. JAMA, 234(13), 1318-9. https://doi.org/10.1001/jama.1975.03260260022004
Pollner, P. "Letter: Career decisions." JAMA vol. 234,13 (1975): 1318-9. doi: https://doi.org/10.1001/jama.1975.03260260022004
Pollner P. Letter: Career decisions. JAMA. 1975 Dec 29;234(13):1318-9. doi: 10.1001/jama.1975.03260260022004. PMID: 1242760.
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Laser wakefield acceleration with mid-IR laser pulses.

Optics letters

Woodbury D, Feder L, Shumakova V, Gollner C, Schwartz R, Miao B, Salehi F, Korolov A, Pugžlys A, Baltuška A, Milchberg HM.
PMID: 29489797
Opt Lett. 2018 Mar 01;43(5):1131-1134. doi: 10.1364/OL.43.001131.

We report on, to the best of our knowledge, the first results of laser plasma wakefield acceleration driven by ultrashort mid-infrared (IR) laser pulses (λ=3.9  μm, 100 fs, 0.25 TW), which enable near- and above-critical density interactions with moderate-density...

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Woodbury D, Feder L, Shumakova V, et al. Laser wakefield acceleration with mid-IR laser pulses. Opt Lett. 2018;43(5):1131-1134doi: 10.1364/OL.43.001131.
Woodbury, D., Feder, L., Shumakova, V., Gollner, C., Schwartz, R., Miao, B., Salehi, F., Korolov, A., Pugžlys, A., Baltuška, A., & Milchberg, H. M. (2018). Laser wakefield acceleration with mid-IR laser pulses. Optics letters, 43(5), 1131-1134. https://doi.org/10.1364/OL.43.001131
Woodbury, D, et al. "Laser wakefield acceleration with mid-IR laser pulses." Optics letters vol. 43,5 (2018): 1131-1134. doi: https://doi.org/10.1364/OL.43.001131
Woodbury D, Feder L, Shumakova V, Gollner C, Schwartz R, Miao B, Salehi F, Korolov A, Pugžlys A, Baltuška A, Milchberg HM. Laser wakefield acceleration with mid-IR laser pulses. Opt Lett. 2018 Mar 01;43(5):1131-1134. doi: 10.1364/OL.43.001131. PMID: 29489797.
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Atmospheric Acetaldehyde: Importance of Air-Sea Exchange and a Missing Source in the Remote Troposphere.

Geophysical research letters

Wang S, Apel EC, Hornbrook RS, Hills A, Emmons LK, Tilmes S, Lamarque JF, Jimenez JL, Campuzano-Jost P, Nault BA, Crounse JD, Wennberg PO, Ryerson TB, Thompson CR, Peischl J, Moore F, Nance D, Hall B, Elkins J, Tanner D, Gregory Huey L, Hall SR, Ullmann K, Orlando JJ, Tyndall GS, Flocke FM, Ray E, Hanisco TF, Wolfe GM, St Clair J, Commane R, Daube B, Barletta B, Blake DR, Weinzierl B, Dollner M, Conley A, Vitt F, Wofsy SC, Riemer DD.
PMID: 32606484
Geophys Res Lett. 2019 May 28;46(10):5601-5613. doi: 10.1029/2019GL082034. Epub 2019 Apr 29.

We report airborne measurements of acetaldehyde (CH

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Wang S, Apel EC, Hornbrook RS, et al. Atmospheric Acetaldehyde: Importance of Air-Sea Exchange and a Missing Source in the Remote Troposphere. Geophys Res Lett. 2019;46(10):5601-5613doi: 10.1029/2019GL082034.
Wang, S., Apel, E. C., Hornbrook, R. S., Hills, A., Emmons, L. K., Tilmes, S., Lamarque, J. F., Jimenez, J. L., Campuzano-Jost, P., Nault, B. A., Crounse, J. D., Wennberg, P. O., Ryerson, T. B., Thompson, C. R., Peischl, J., Moore, F., Nance, D., Hall, B., Elkins, J., Tanner, D., Gregory Huey, L., Hall, S. R., Ullmann, K., Orlando, J. J., Tyndall, G. S., Flocke, F. M., Ray, E., Hanisco, T. F., Wolfe, G. M., St Clair, J., Commane, R., Daube, B., Barletta, B., Blake, D. R., Weinzierl, B., Dollner, M., Conley, A., Vitt, F., Wofsy, S. C., & Riemer, D. D. (2019). Atmospheric Acetaldehyde: Importance of Air-Sea Exchange and a Missing Source in the Remote Troposphere. Geophysical research letters, 46(10), 5601-5613. https://doi.org/10.1029/2019GL082034
Wang, Siyuan, et al. "Atmospheric Acetaldehyde: Importance of Air-Sea Exchange and a Missing Source in the Remote Troposphere." Geophysical research letters vol. 46,10 (2019): 5601-5613. doi: https://doi.org/10.1029/2019GL082034
Wang S, Apel EC, Hornbrook RS, Hills A, Emmons LK, Tilmes S, Lamarque JF, Jimenez JL, Campuzano-Jost P, Nault BA, Crounse JD, Wennberg PO, Ryerson TB, Thompson CR, Peischl J, Moore F, Nance D, Hall B, Elkins J, Tanner D, Gregory Huey L, Hall SR, Ullmann K, Orlando JJ, Tyndall GS, Flocke FM, Ray E, Hanisco TF, Wolfe GM, St Clair J, Commane R, Daube B, Barletta B, Blake DR, Weinzierl B, Dollner M, Conley A, Vitt F, Wofsy SC, Riemer DD. Atmospheric Acetaldehyde: Importance of Air-Sea Exchange and a Missing Source in the Remote Troposphere. Geophys Res Lett. 2019 May 28;46(10):5601-5613. doi: 10.1029/2019GL082034. Epub 2019 Apr 29. PMID: 32606484; PMCID: PMC7325730.
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High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow.

BMC bioinformatics

Ozik J, Collier N, Wozniak JM, Macal C, Cockrell C, Friedman SH, Ghaffarizadeh A, Heiland R, An G, Macklin P.
PMID: 30577742
BMC Bioinformatics. 2018 Dec 21;19:483. doi: 10.1186/s12859-018-2510-x.

BACKGROUND: Cancer is a complex, multiscale dynamical system, with interactions between tumor cells and non-cancerous host systems. Therapies act on this combined cancer-host system, sometimes with unexpected results. Systematic investigation of mechanistic computational models can augment traditional laboratory and...

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Ozik J, Collier N, Wozniak JM, et al. High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow. BMC Bioinformatics. 2018;19:483doi: 10.1186/s12859-018-2510-x.
Ozik, J., Collier, N., Wozniak, J. M., Macal, C., Cockrell, C., Friedman, S. H., Ghaffarizadeh, A., Heiland, R., An, G., & Macklin, P. (2018). High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow. BMC bioinformatics, 19483. https://doi.org/10.1186/s12859-018-2510-x
Ozik, Jonathan, et al. "High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow." BMC bioinformatics vol. 19 (2018): 483. doi: https://doi.org/10.1186/s12859-018-2510-x
Ozik J, Collier N, Wozniak JM, Macal C, Cockrell C, Friedman SH, Ghaffarizadeh A, Heiland R, An G, Macklin P. High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow. BMC Bioinformatics. 2018 Dec 21;19:483. doi: 10.1186/s12859-018-2510-x. PMID: 30577742; PMCID: PMC6302449.
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A pragmatic guide to geoparsing evaluation: Toponyms, Named Entity Recognition and pragmatics.

Language resources and evaluation

Gritta M, Pilehvar MT, Collier N.
PMID: 32802011
Lang Resour Eval. 2020;54(3):683-712. doi: 10.1007/s10579-019-09475-3. Epub 2019 Sep 19.

Empirical methods in geoparsing have thus far lacked a standard evaluation framework describing the task, metrics and data used to compare state-of-the-art systems. Evaluation is further made inconsistent, even unrepresentative of real world usage by the lack of distinction...

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Gritta M, Pilehvar MT, Collier N. A pragmatic guide to geoparsing evaluation: Toponyms, Named Entity Recognition and pragmatics. Lang Resour Eval. 2019;54(3):683-712doi: 10.1007/s10579-019-09475-3.
Gritta, M., Pilehvar, M. T., & Collier, N. (2020). A pragmatic guide to geoparsing evaluation: Toponyms, Named Entity Recognition and pragmatics. Language resources and evaluation, 54(3), 683-712. https://doi.org/10.1007/s10579-019-09475-3
Gritta, Milan, et al. "A pragmatic guide to geoparsing evaluation: Toponyms, Named Entity Recognition and pragmatics." Language resources and evaluation vol. 54,3 (2020): 683-712. doi: https://doi.org/10.1007/s10579-019-09475-3
Gritta M, Pilehvar MT, Collier N. A pragmatic guide to geoparsing evaluation: Toponyms, Named Entity Recognition and pragmatics. Lang Resour Eval. 2020;54(3):683-712. doi: 10.1007/s10579-019-09475-3. Epub 2019 Sep 19. PMID: 32802011; PMCID: PMC7406539.
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Phase space volume scaling of generalized entropies and anomalous diffusion scaling governed by corresponding non-linear Fokker-Planck equations.

Scientific reports

Czégel D, Balogh SG, Pollner P, Palla G.
PMID: 29382874
Sci Rep. 2018 Jan 30;8(1):1883. doi: 10.1038/s41598-018-20202-w.

Many physical, biological or social systems are governed by history-dependent dynamics or are composed of strongly interacting units, showing an extreme diversity of microscopic behaviour. Macroscopically, however, they can be efficiently modeled by generalizing concepts of the theory of...

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Czégel D, Balogh SG, Pollner P, et al. Phase space volume scaling of generalized entropies and anomalous diffusion scaling governed by corresponding non-linear Fokker-Planck equations. Sci Rep. 2018;8(1):1883doi: 10.1038/s41598-018-20202-w.
Czégel, D., Balogh, S. G., Pollner, P., & Palla, G. (2018). Phase space volume scaling of generalized entropies and anomalous diffusion scaling governed by corresponding non-linear Fokker-Planck equations. Scientific reports, 8(1), 1883. https://doi.org/10.1038/s41598-018-20202-w
Czégel, Dániel, et al. "Phase space volume scaling of generalized entropies and anomalous diffusion scaling governed by corresponding non-linear Fokker-Planck equations." Scientific reports vol. 8,1 (2018): 1883. doi: https://doi.org/10.1038/s41598-018-20202-w
Czégel D, Balogh SG, Pollner P, Palla G. Phase space volume scaling of generalized entropies and anomalous diffusion scaling governed by corresponding non-linear Fokker-Planck equations. Sci Rep. 2018 Jan 30;8(1):1883. doi: 10.1038/s41598-018-20202-w. PMID: 29382874; PMCID: PMC5789980.
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Oncolytic viruses as anticancer vaccines.

Frontiers in oncology

Woller N, Gürlevik E, Ureche CI, Schumacher A, Kühnel F.
PMID: 25101244
Front Oncol. 2014 Jul 21;4:188. doi: 10.3389/fonc.2014.00188. eCollection 2014.

Oncolytic virotherapy has shown impressive results in preclinical studies and first promising therapeutic outcomes in clinical trials as well. Since viruses are known for a long time as excellent vaccination agents, oncolytic viruses are now designed as novel anticancer...

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Woller N, Gürlevik E, Ureche CI, et al. Oncolytic viruses as anticancer vaccines. Front Oncol. 2014;4:188doi: 10.3389/fonc.2014.00188.
Woller, N., Gürlevik, E., Ureche, C. I., Schumacher, A., & Kühnel, F. (2014). Oncolytic viruses as anticancer vaccines. Frontiers in oncology, 4188. https://doi.org/10.3389/fonc.2014.00188
Woller, Norman, et al. "Oncolytic viruses as anticancer vaccines." Frontiers in oncology vol. 4 (2014): 188. doi: https://doi.org/10.3389/fonc.2014.00188
Woller N, Gürlevik E, Ureche CI, Schumacher A, Kühnel F. Oncolytic viruses as anticancer vaccines. Front Oncol. 2014 Jul 21;4:188. doi: 10.3389/fonc.2014.00188. eCollection 2014. PMID: 25101244; PMCID: PMC4104469.
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Showing 25 to 36 of 157 entries