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Dynamic calibration of agent-based models using data assimilation.

Royal Society open science

Ward JA, Evans AJ, Malleson NS.
PMID: 27152214
R Soc Open Sci. 2016 Apr 13;3(4):150703. doi: 10.1098/rsos.150703. eCollection 2016 Apr.

A widespread approach to investigating the dynamical behaviour of complex social systems is via agent-based models (ABMs). In this paper, we describe how such models can be dynamically calibrated using the ensemble Kalman filter (EnKF), a standard method of...

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Ward JA, Evans AJ, Malleson NS. Dynamic calibration of agent-based models using data assimilation. R Soc Open Sci. 2016;3(4):150703doi: 10.1098/rsos.150703.
Ward, J. A., Evans, A. J., & Malleson, N. S. (2016). Dynamic calibration of agent-based models using data assimilation. Royal Society open science, 3(4), 150703. https://doi.org/10.1098/rsos.150703
Ward, Jonathan A, et al. "Dynamic calibration of agent-based models using data assimilation." Royal Society open science vol. 3,4 (2016): 150703. doi: https://doi.org/10.1098/rsos.150703
Ward JA, Evans AJ, Malleson NS. Dynamic calibration of agent-based models using data assimilation. R Soc Open Sci. 2016 Apr 13;3(4):150703. doi: 10.1098/rsos.150703. eCollection 2016 Apr. PMID: 27152214; PMCID: PMC4852637.
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Binding of Hydrophobic Guests in a Coordination Cage Cavity is Driven by Liberation of "High-Energy" Water.

Chemistry (Weinheim an der Bergstrasse, Germany)

Metherell AJ, Cullen W, Williams NH, Ward MD.
PMID: 29083066
Chemistry. 2018 Feb 01;24(7):1554-1560. doi: 10.1002/chem.201704163. Epub 2017 Nov 30.

The cavity of an M

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Metherell AJ, Cullen W, Williams NH, et al. Binding of Hydrophobic Guests in a Coordination Cage Cavity is Driven by Liberation of "High-Energy" Water. Chemistry. 2017;24(7):1554-1560doi: 10.1002/chem.201704163.
Metherell, A. J., Cullen, W., Williams, N. H., & Ward, M. D. (2018). Binding of Hydrophobic Guests in a Coordination Cage Cavity is Driven by Liberation of "High-Energy" Water. Chemistry (Weinheim an der Bergstrasse, Germany), 24(7), 1554-1560. https://doi.org/10.1002/chem.201704163
Metherell, Alexander J, et al. "Binding of Hydrophobic Guests in a Coordination Cage Cavity is Driven by Liberation of "High-Energy" Water." Chemistry (Weinheim an der Bergstrasse, Germany) vol. 24,7 (2018): 1554-1560. doi: https://doi.org/10.1002/chem.201704163
Metherell AJ, Cullen W, Williams NH, Ward MD. Binding of Hydrophobic Guests in a Coordination Cage Cavity is Driven by Liberation of "High-Energy" Water. Chemistry. 2018 Feb 01;24(7):1554-1560. doi: 10.1002/chem.201704163. Epub 2017 Nov 30. PMID: 29083066; PMCID: PMC5814853.
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Advanced Collaborative Emissions Study Auxiliary Findings on 2007-Compliant Diesel Engines: A Comparison With Diesel Exhaust Genotoxicity Effects Prior to 2007.

Environmental health insights

Hallberg LM, Ward JB, Wickliffe JK, Ameredes BT.
PMID: 28659715
Environ Health Insights. 2017 Jun 19;11:1178630217714215. doi: 10.1177/1178630217714215. eCollection 2017.

Since its beginning, more than 117 years ago, the compression-ignition engine, or diesel engine, has grown to become a critically important part of industry and transportation. Public concerns over the health effects from diesel emissions have driven the growth...

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Hallberg LM, Ward JB, Wickliffe JK, et al. Advanced Collaborative Emissions Study Auxiliary Findings on 2007-Compliant Diesel Engines: A Comparison With Diesel Exhaust Genotoxicity Effects Prior to 2007. Environ Health Insights. 2017;11:1178630217714215doi: 10.1177/1178630217714215.
Hallberg, L. M., Ward, J. B., Wickliffe, J. K., & Ameredes, B. T. (2017). Advanced Collaborative Emissions Study Auxiliary Findings on 2007-Compliant Diesel Engines: A Comparison With Diesel Exhaust Genotoxicity Effects Prior to 2007. Environmental health insights, 111178630217714215. https://doi.org/10.1177/1178630217714215
Hallberg, Lance M, et al. "Advanced Collaborative Emissions Study Auxiliary Findings on 2007-Compliant Diesel Engines: A Comparison With Diesel Exhaust Genotoxicity Effects Prior to 2007." Environmental health insights vol. 11 (2017): 1178630217714215. doi: https://doi.org/10.1177/1178630217714215
Hallberg LM, Ward JB, Wickliffe JK, Ameredes BT. Advanced Collaborative Emissions Study Auxiliary Findings on 2007-Compliant Diesel Engines: A Comparison With Diesel Exhaust Genotoxicity Effects Prior to 2007. Environ Health Insights. 2017 Jun 19;11:1178630217714215. doi: 10.1177/1178630217714215. eCollection 2017. PMID: 28659715; PMCID: PMC5479429.
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Fluorescence spectroscopy and microscopy as tools for monitoring redox transformations of uranium in biological systems.

Chemical science

Jones DL, Andrews MB, Swinburne AN, Botchway SW, Ward AD, Lloyd JR, Natrajan LS.
PMID: 29142731
Chem Sci. 2015 Sep 01;6(9):5133-5138. doi: 10.1039/c5sc00661a. Epub 2015 Jun 09.

We report a study of redox reactions of uranium in model conditions using luminescence spectroscopy, which with its ease and wide availability has the potential to offer new insights into a bioremediation strategy of particular interest - the enzymatic...

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Jones DL, Andrews MB, Swinburne AN, et al. Fluorescence spectroscopy and microscopy as tools for monitoring redox transformations of uranium in biological systems. Chem Sci. 2015;6(9):5133-5138doi: 10.1039/c5sc00661a.
Jones, D. L., Andrews, M. B., Swinburne, A. N., Botchway, S. W., Ward, A. D., Lloyd, J. R., & Natrajan, L. S. (2015). Fluorescence spectroscopy and microscopy as tools for monitoring redox transformations of uranium in biological systems. Chemical science, 6(9), 5133-5138. https://doi.org/10.1039/c5sc00661a
Jones, Debbie L, et al. "Fluorescence spectroscopy and microscopy as tools for monitoring redox transformations of uranium in biological systems." Chemical science vol. 6,9 (2015): 5133-5138. doi: https://doi.org/10.1039/c5sc00661a
Jones DL, Andrews MB, Swinburne AN, Botchway SW, Ward AD, Lloyd JR, Natrajan LS. Fluorescence spectroscopy and microscopy as tools for monitoring redox transformations of uranium in biological systems. Chem Sci. 2015 Sep 01;6(9):5133-5138. doi: 10.1039/c5sc00661a. Epub 2015 Jun 09. PMID: 29142731; PMCID: PMC5666681.
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An examination of the factors influencing mercury and methylmercury particulate distributions, methylation and demethylation rates in laboratory-generated marine snow.

Marine chemistry

Ortiz VL, Mason RP, Ward JE.
PMID: 26644635
Mar Chem. 2015 Dec 20;177:753-762. doi: 10.1016/j.marchem.2015.07.006.

In the marine environment, settling particulates have been widely studied for their role as effective vertical transporters of nutrients and metals scavenged from the euphotic zone to the benthos. These particulates are composed of transparent exopolymers, plankton and bacterial...

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Ortiz VL, Mason RP, Ward JE. An examination of the factors influencing mercury and methylmercury particulate distributions, methylation and demethylation rates in laboratory-generated marine snow. Mar Chem. 2015;177:753-762doi: 10.1016/j.marchem.2015.07.006.
Ortiz, V. L., Mason, R. P., & Ward, J. E. (2015). An examination of the factors influencing mercury and methylmercury particulate distributions, methylation and demethylation rates in laboratory-generated marine snow. Marine chemistry, 177753-762. https://doi.org/10.1016/j.marchem.2015.07.006
Ortiz, Veronica L, et al. "An examination of the factors influencing mercury and methylmercury particulate distributions, methylation and demethylation rates in laboratory-generated marine snow." Marine chemistry vol. 177 (2015): 753-762. doi: https://doi.org/10.1016/j.marchem.2015.07.006
Ortiz VL, Mason RP, Ward JE. An examination of the factors influencing mercury and methylmercury particulate distributions, methylation and demethylation rates in laboratory-generated marine snow. Mar Chem. 2015 Dec 20;177:753-762. doi: 10.1016/j.marchem.2015.07.006. PMID: 26644635; PMCID: PMC4669965.
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Synthesis and characterization of two quaternary uranium tellurides, RbTiU₃Te₉ and CsTiU₃Te₉.

Inorganic chemistry

Ward MD, Mesbah A, Lee M, Malliakas CD, Choi ES, Ibers JA.
PMID: 25050934
Inorg Chem. 2014 Aug 04;53(15):7909-15. doi: 10.1021/ic500599d. Epub 2014 Jul 22.

Black crystals of RbTiU₃Te₉ and CsTiU₃Te₉ have been synthesized at 1223 and 1173 K, respectively, by high-temperature solid-state routes. These compounds crystallize in a new structure type in space group C(2h)²-P2₁/m of the monoclinic system. The structure, which is...

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Ward MD, Mesbah A, Lee M, et al. Synthesis and characterization of two quaternary uranium tellurides, RbTiU₃Te₉ and CsTiU₃Te₉. Inorg Chem. 2014;53(15):7909-15doi: 10.1021/ic500599d.
Ward, M. D., Mesbah, A., Lee, M., Malliakas, C. D., Choi, E. S., & Ibers, J. A. (2014). Synthesis and characterization of two quaternary uranium tellurides, RbTiU₃Te₉ and CsTiU₃Te₉. Inorganic chemistry, 53(15), 7909-15. https://doi.org/10.1021/ic500599d
Ward, Matthew D, et al. "Synthesis and characterization of two quaternary uranium tellurides, RbTiU₃Te₉ and CsTiU₃Te₉." Inorganic chemistry vol. 53,15 (2014): 7909-15. doi: https://doi.org/10.1021/ic500599d
Ward MD, Mesbah A, Lee M, Malliakas CD, Choi ES, Ibers JA. Synthesis and characterization of two quaternary uranium tellurides, RbTiU₃Te₉ and CsTiU₃Te₉. Inorg Chem. 2014 Aug 04;53(15):7909-15. doi: 10.1021/ic500599d. Epub 2014 Jul 22. PMID: 25050934.
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Measurement of mercury species in human blood using triple spike isotope dilution with SPME-GC-ICP-DRC-MS.

Analytical and bioanalytical chemistry

Sommer YL, Verdon CP, Fresquez MR, Ward CD, Wood EB, Pan Y, Caldwell KL, Jones RL.
PMID: 24948088
Anal Bioanal Chem. 2014 Aug;406(20):5039-47. doi: 10.1007/s00216-014-7907-4. Epub 2014 Jun 20.

The measurement of different mercury compounds in human blood can provide valuable information about the type of mercury exposure. To this end, our laboratory developed a biomonitoring method for the quantification of inorganic (iHg), methyl (MeHg), and ethyl (EtHg)...

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Sommer YL, Verdon CP, Fresquez MR, et al. Measurement of mercury species in human blood using triple spike isotope dilution with SPME-GC-ICP-DRC-MS. Anal Bioanal Chem. 2014;406(20):5039-47doi: 10.1007/s00216-014-7907-4.
Sommer, Y. L., Verdon, C. P., Fresquez, M. R., Ward, C. D., Wood, E. B., Pan, Y., Caldwell, K. L., & Jones, R. L. (2014). Measurement of mercury species in human blood using triple spike isotope dilution with SPME-GC-ICP-DRC-MS. Analytical and bioanalytical chemistry, 406(20), 5039-47. https://doi.org/10.1007/s00216-014-7907-4
Sommer, Yuliya L, et al. "Measurement of mercury species in human blood using triple spike isotope dilution with SPME-GC-ICP-DRC-MS." Analytical and bioanalytical chemistry vol. 406,20 (2014): 5039-47. doi: https://doi.org/10.1007/s00216-014-7907-4
Sommer YL, Verdon CP, Fresquez MR, Ward CD, Wood EB, Pan Y, Caldwell KL, Jones RL. Measurement of mercury species in human blood using triple spike isotope dilution with SPME-GC-ICP-DRC-MS. Anal Bioanal Chem. 2014 Aug;406(20):5039-47. doi: 10.1007/s00216-014-7907-4. Epub 2014 Jun 20. PMID: 24948088; PMCID: PMC4685456.
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Perceived discrimination and depressive symptoms among US Latinos: the modifying role of educational attainment.

Ethnicity & health

Ward JB, Feinstein L, Vines AI, Robinson WR, Haan MN, Aiello AE.
PMID: 28399649
Ethn Health. 2019 Apr;24(3):271-286. doi: 10.1080/13557858.2017.1315378. Epub 2017 Apr 12.

OBJECTIVE: Despite growing evidence that discrimination may contribute to poor mental health, few studies have assessed this association among US Latinos. Furthermore, the interaction between discrimination and educational attainment in shaping Latino mental health is virtually unexplored. This study...

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Ward JB, Feinstein L, Vines AI, et al. Perceived discrimination and depressive symptoms among US Latinos: the modifying role of educational attainment. Ethn Health. 2017;24(3):271-286doi: 10.1080/13557858.2017.1315378.
Ward, J. B., Feinstein, L., Vines, A. I., Robinson, W. R., Haan, M. N., & Aiello, A. E. (2019). Perceived discrimination and depressive symptoms among US Latinos: the modifying role of educational attainment. Ethnicity & health, 24(3), 271-286. https://doi.org/10.1080/13557858.2017.1315378
Ward, Julia B, et al. "Perceived discrimination and depressive symptoms among US Latinos: the modifying role of educational attainment." Ethnicity & health vol. 24,3 (2019): 271-286. doi: https://doi.org/10.1080/13557858.2017.1315378
Ward JB, Feinstein L, Vines AI, Robinson WR, Haan MN, Aiello AE. Perceived discrimination and depressive symptoms among US Latinos: the modifying role of educational attainment. Ethn Health. 2019 Apr;24(3):271-286. doi: 10.1080/13557858.2017.1315378. Epub 2017 Apr 12. PMID: 28399649; PMCID: PMC5683937.
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'One-stop shop': lung cancer patients' and caregivers' perceptions of multidisciplinary care in a community healthcare setting.

Translational lung cancer research

Kedia SK, Ward KD, Digney SA, Jackson BM, Nellum AL, McHugh L, Roark KS, Osborne OT, Crossley FJ, Faris N, Osarogiagbon RU.
PMID: 26380187
Transl Lung Cancer Res. 2015 Aug;4(4):456-64. doi: 10.3978/j.issn.2218-6751.2015.07.10.

BACKGROUND: Multidisciplinary care is rarely practiced in community healthcare settings where the majority of patients receive lung cancer care in the US. We sought direct input from patients and their informal caregivers on their experience of lung cancer care...

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Kedia SK, Ward KD, Digney SA, et al. 'One-stop shop': lung cancer patients' and caregivers' perceptions of multidisciplinary care in a community healthcare setting. Transl Lung Cancer Res. 2015;4(4):456-64doi: 10.3978/j.issn.2218-6751.2015.07.10.
Kedia, S. K., Ward, K. D., Digney, S. A., Jackson, B. M., Nellum, A. L., McHugh, L., Roark, K. S., Osborne, O. T., Crossley, F. J., Faris, N., & Osarogiagbon, R. U. (2015). 'One-stop shop': lung cancer patients' and caregivers' perceptions of multidisciplinary care in a community healthcare setting. Translational lung cancer research, 4(4), 456-64. https://doi.org/10.3978/j.issn.2218-6751.2015.07.10
Kedia, Satish K, et al. "'One-stop shop': lung cancer patients' and caregivers' perceptions of multidisciplinary care in a community healthcare setting." Translational lung cancer research vol. 4,4 (2015): 456-64. doi: https://doi.org/10.3978/j.issn.2218-6751.2015.07.10
Kedia SK, Ward KD, Digney SA, Jackson BM, Nellum AL, McHugh L, Roark KS, Osborne OT, Crossley FJ, Faris N, Osarogiagbon RU. 'One-stop shop': lung cancer patients' and caregivers' perceptions of multidisciplinary care in a community healthcare setting. Transl Lung Cancer Res. 2015 Aug;4(4):456-64. doi: 10.3978/j.issn.2218-6751.2015.07.10. PMID: 26380187; PMCID: PMC4549474.
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A revisited phylogeography of Nautilus pompilius.

Ecology and evolution

Vandepas LE, Dooley FD, Barord GJ, Swalla BJ, Ward PD.
PMID: 27547323
Ecol Evol. 2016 Jun 21;6(14):4924-35. doi: 10.1002/ece3.2248. eCollection 2016 Jul.

The cephalopod genus Nautilus is considered a "living fossil" with a contested number of extant and extinct species, and a benthic lifestyle that limits movement of animals between isolated seamounts and landmasses in the Indo-Pacific. Nautiluses are fished for...

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Vandepas LE, Dooley FD, Barord GJ, et al. A revisited phylogeography of Nautilus pompilius. Ecol Evol. 2016;6(14):4924-35doi: 10.1002/ece3.2248.
Vandepas, L. E., Dooley, F. D., Barord, G. J., Swalla, B. J., & Ward, P. D. (2016). A revisited phylogeography of Nautilus pompilius. Ecology and evolution, 6(14), 4924-35. https://doi.org/10.1002/ece3.2248
Vandepas, Lauren E, et al. "A revisited phylogeography of Nautilus pompilius." Ecology and evolution vol. 6,14 (2016): 4924-35. doi: https://doi.org/10.1002/ece3.2248
Vandepas LE, Dooley FD, Barord GJ, Swalla BJ, Ward PD. A revisited phylogeography of Nautilus pompilius. Ecol Evol. 2016 Jun 21;6(14):4924-35. doi: 10.1002/ece3.2248. eCollection 2016 Jul. PMID: 27547323; PMCID: PMC4979717.
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Stepwise assembly of mixed-metal coordination cages containing both kinetically inert and kinetically labile metal ions: introduction of metal-centred redox and photophysical activity at specific sites.

Dalton transactions (Cambridge, England : 2003)

Wragg AB, Metherell AJ, Cullen W, Ward MD.
PMID: 26406288
Dalton Trans. 2015 Nov 07;44(41):17939-49. doi: 10.1039/c5dt02957k. Epub 2015 Sep 25.

Stepwise preparation of the heterometallic octanuclear coordination cages [(M(a))4(M(b))4L12](16+) is reported, in which M(a) = Ru or Os and M(b) = Cd or Co (all in their +2 oxidation state). This requires initial preparation of the kinetically inert mononuclear...

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Wragg AB, Metherell AJ, Cullen W, et al. Stepwise assembly of mixed-metal coordination cages containing both kinetically inert and kinetically labile metal ions: introduction of metal-centred redox and photophysical activity at specific sites. Dalton Trans. 2015;44(41):17939-49doi: 10.1039/c5dt02957k.
Wragg, A. B., Metherell, A. J., Cullen, W., & Ward, M. D. (2015). Stepwise assembly of mixed-metal coordination cages containing both kinetically inert and kinetically labile metal ions: introduction of metal-centred redox and photophysical activity at specific sites. Dalton transactions (Cambridge, England : 2003), 44(41), 17939-49. https://doi.org/10.1039/c5dt02957k
Wragg, Ashley B, et al. "Stepwise assembly of mixed-metal coordination cages containing both kinetically inert and kinetically labile metal ions: introduction of metal-centred redox and photophysical activity at specific sites." Dalton transactions (Cambridge, England : 2003) vol. 44,41 (2015): 17939-49. doi: https://doi.org/10.1039/c5dt02957k
Wragg AB, Metherell AJ, Cullen W, Ward MD. Stepwise assembly of mixed-metal coordination cages containing both kinetically inert and kinetically labile metal ions: introduction of metal-centred redox and photophysical activity at specific sites. Dalton Trans. 2015 Nov 07;44(41):17939-49. doi: 10.1039/c5dt02957k. Epub 2015 Sep 25. PMID: 26406288.
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Mechanical Characterization of Ultralow Interfacial Tension Oil-in-Water Droplets by Thermal Capillary Wave Analysis in a Microfluidic Device.

Langmuir : the ACS journal of surfaces and colloids

Bolognesi G, Saito Y, Tyler AI, Ward AD, Bain CD, Ces O.
PMID: 26982629
Langmuir. 2016 Apr 19;32(15):3580-6. doi: 10.1021/acs.langmuir.5b04702. Epub 2016 Apr 08.

Measurements of the ultralow interfacial tension and surfactant film bending rigidity for micron-sized heptane droplets in bis(2-ethylhexyl) sodium sulfosuccinate-NaCl aqueous solutions were performed in a microfluidic device through the analysis of thermally driven droplet interface fluctuations. The Fourier spectrum...

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Bolognesi G, Saito Y, Tyler AI, et al. Mechanical Characterization of Ultralow Interfacial Tension Oil-in-Water Droplets by Thermal Capillary Wave Analysis in a Microfluidic Device. Langmuir. 2016;32(15):3580-6doi: 10.1021/acs.langmuir.5b04702.
Bolognesi, G., Saito, Y., Tyler, A. I., Ward, A. D., Bain, C. D., & Ces, O. (2016). Mechanical Characterization of Ultralow Interfacial Tension Oil-in-Water Droplets by Thermal Capillary Wave Analysis in a Microfluidic Device. Langmuir : the ACS journal of surfaces and colloids, 32(15), 3580-6. https://doi.org/10.1021/acs.langmuir.5b04702
Bolognesi, Guido, et al. "Mechanical Characterization of Ultralow Interfacial Tension Oil-in-Water Droplets by Thermal Capillary Wave Analysis in a Microfluidic Device." Langmuir : the ACS journal of surfaces and colloids vol. 32,15 (2016): 3580-6. doi: https://doi.org/10.1021/acs.langmuir.5b04702
Bolognesi G, Saito Y, Tyler AI, Ward AD, Bain CD, Ces O. Mechanical Characterization of Ultralow Interfacial Tension Oil-in-Water Droplets by Thermal Capillary Wave Analysis in a Microfluidic Device. Langmuir. 2016 Apr 19;32(15):3580-6. doi: 10.1021/acs.langmuir.5b04702. Epub 2016 Apr 08. PMID: 26982629.
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Showing 13 to 24 of 1307 entries