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Critical appraisal and data extraction for systematic reviews of prediction modelling studies: the CHARMS checklist.

PLoS medicine

Moons KG, de Groot JA, Bouwmeester W, Vergouwe Y, Mallett S, Altman DG, Reitsma JB, Collins GS.
PMID: 25314315
PLoS Med. 2014 Oct 14;11(10):e1001744. doi: 10.1371/journal.pmed.1001744. eCollection 2014 Oct.

Carl Moons and colleagues provide a checklist and background explanation for critically appraising and extracting data from systematic reviews of prognostic and diagnostic prediction modelling studies. Please see later in the article for the Editors' Summary.

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Moons KG, de Groot JA, Bouwmeester W, et al. Critical appraisal and data extraction for systematic reviews of prediction modelling studies: the CHARMS checklist. PLoS Med. 2014;11(10):e1001744doi: 10.1371/journal.pmed.1001744.
Moons, K. G., de Groot, J. A., Bouwmeester, W., Vergouwe, Y., Mallett, S., Altman, D. G., Reitsma, J. B., & Collins, G. S. (2014). Critical appraisal and data extraction for systematic reviews of prediction modelling studies: the CHARMS checklist. PLoS medicine, 11(10), e1001744. https://doi.org/10.1371/journal.pmed.1001744
Moons, Karel G M, et al. "Critical appraisal and data extraction for systematic reviews of prediction modelling studies: the CHARMS checklist." PLoS medicine vol. 11,10 (2014): e1001744. doi: https://doi.org/10.1371/journal.pmed.1001744
Moons KG, de Groot JA, Bouwmeester W, Vergouwe Y, Mallett S, Altman DG, Reitsma JB, Collins GS. Critical appraisal and data extraction for systematic reviews of prediction modelling studies: the CHARMS checklist. PLoS Med. 2014 Oct 14;11(10):e1001744. doi: 10.1371/journal.pmed.1001744. eCollection 2014 Oct. PMID: 25314315; PMCID: PMC4196729.
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Collecting student feedback: a whole-school approach.

Medical education

Collett T, Hanks S, Watson H, Davies T.
PMID: 28394052
Med Educ. 2017 May;51(5):547-548. doi: 10.1111/medu.13303.

No abstract available.

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Collett T, Hanks S, Watson H, et al. Collecting student feedback: a whole-school approach. Med Educ. 2017;51(5):547-548doi: 10.1111/medu.13303.
Collett, T., Hanks, S., Watson, H., & Davies, T. (2017). Collecting student feedback: a whole-school approach. Medical education, 51(5), 547-548. https://doi.org/10.1111/medu.13303
Collett, Tracey, et al. "Collecting student feedback: a whole-school approach." Medical education vol. 51,5 (2017): 547-548. doi: https://doi.org/10.1111/medu.13303
Collett T, Hanks S, Watson H, Davies T. Collecting student feedback: a whole-school approach. Med Educ. 2017 May;51(5):547-548. doi: 10.1111/medu.13303. PMID: 28394052.
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Structural, dynamical, and transport properties of the hydrated halides: How do At(-) bulk properties compare with those of the other halides, from F(-) to I(-)?.

The Journal of chemical physics

Réal F, Gomes AS, Guerrero Martínez YO, Ayed T, Galland N, Masella M, Vallet V.
PMID: 27036467
J Chem Phys. 2016 Mar 28;144(12):124513. doi: 10.1063/1.4944613.

The properties of halides from the lightest, fluoride (F(-)), to the heaviest, astatide (At(-)), have been studied in water using a polarizable force-field approach based on molecular dynamics (MD) simulations at the 10 ns scale. The selected force-field explicitly...

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Réal F, Gomes AS, Guerrero Martínez YO, et al. Structural, dynamical, and transport properties of the hydrated halides: How do At(-) bulk properties compare with those of the other halides, from F(-) to I(-)?. J Chem Phys. 2016;144(12):124513doi: 10.1063/1.4944613.
Réal, F., Gomes, A. S., Guerrero Martínez, Y. O., Ayed, T., Galland, N., Masella, M., & Vallet, V. (2016). Structural, dynamical, and transport properties of the hydrated halides: How do At(-) bulk properties compare with those of the other halides, from F(-) to I(-)?. The Journal of chemical physics, 144(12), 124513. https://doi.org/10.1063/1.4944613
Réal, Florent, et al. "Structural, dynamical, and transport properties of the hydrated halides: How do At(-) bulk properties compare with those of the other halides, from F(-) to I(-)?." The Journal of chemical physics vol. 144,12 (2016): 124513. doi: https://doi.org/10.1063/1.4944613
Réal F, Gomes AS, Guerrero Martínez YO, Ayed T, Galland N, Masella M, Vallet V. Structural, dynamical, and transport properties of the hydrated halides: How do At(-) bulk properties compare with those of the other halides, from F(-) to I(-)?. J Chem Phys. 2016 Mar 28;144(12):124513. doi: 10.1063/1.4944613. PMID: 27036467.
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Reducing health inequalities for people with serious mental illness.

Nursing standard (Royal College of Nursing (Great Britain) : 1987)

Hallett N, Rees H.
PMID: 28513399
Nurs Stand. 2017 May 17;31(38):60-71. doi: 10.7748/ns.2017.e10787.

People with serious mental illness (SMI) are at risk of dying many years earlier than the general population. Providing an effective, cost-efficient healthcare service requires a holistic approach, and improving the physical health of people with SMI should be...

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Hallett N, Rees H. Reducing health inequalities for people with serious mental illness. Nurs Stand. 2017;31(38):60-71doi: 10.7748/ns.2017.e10787.
Hallett, N., & Rees, H. (2017). Reducing health inequalities for people with serious mental illness. Nursing standard (Royal College of Nursing (Great Britain) : 1987), 31(38), 60-71. https://doi.org/10.7748/ns.2017.e10787
Hallett, Nutmeg, and Rees, Helen. "Reducing health inequalities for people with serious mental illness." Nursing standard (Royal College of Nursing (Great Britain) : 1987) vol. 31,38 (2017): 60-71. doi: https://doi.org/10.7748/ns.2017.e10787
Hallett N, Rees H. Reducing health inequalities for people with serious mental illness. Nurs Stand. 2017 May 17;31(38):60-71. doi: 10.7748/ns.2017.e10787. PMID: 28513399.
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Evidence for the spontaneous formation of N-heterocyclic carbenes in imidazolium based ionic liquids.

Chemical communications (Cambridge, England)

Daud NMAN, Bakis E, Hallett JP, Weber CC, Welton T.
PMID: 28890962
Chem Commun (Camb). 2017 Oct 18;53(81):11154-11156. doi: 10.1039/c7cc06112a. Epub 2017 Sep 11.

We present a study of the reactions of aldehydes in ionic liquids which gives evidence for the spontaneous formation of N-heterocyclic carbenes in ionic liquids based on 1,3-dialkyl substituted imidazolium cations from the lack of a deuterium isotope effect...

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Daud NMAN, Bakis E, Hallett JP, et al. Evidence for the spontaneous formation of N-heterocyclic carbenes in imidazolium based ionic liquids. Chem Commun (Camb). 2017;53(81):11154-11156doi: 10.1039/c7cc06112a.
Daud, N. M. A. N., Bakis, E., Hallett, J. P., Weber, C. C., & Welton, T. (2017). Evidence for the spontaneous formation of N-heterocyclic carbenes in imidazolium based ionic liquids. Chemical communications (Cambridge, England), 53(81), 11154-11156. https://doi.org/10.1039/c7cc06112a
Daud, N M A N, et al. "Evidence for the spontaneous formation of N-heterocyclic carbenes in imidazolium based ionic liquids." Chemical communications (Cambridge, England) vol. 53,81 (2017): 11154-11156. doi: https://doi.org/10.1039/c7cc06112a
Daud NMAN, Bakis E, Hallett JP, Weber CC, Welton T. Evidence for the spontaneous formation of N-heterocyclic carbenes in imidazolium based ionic liquids. Chem Commun (Camb). 2017 Oct 18;53(81):11154-11156. doi: 10.1039/c7cc06112a. Epub 2017 Sep 11. PMID: 28890962.
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A case report of HCC cutaneous metastasis.

Journal of gastrointestinal oncology

Traficante D, Assalone P, Tomei F, Calista F, Falleti J, Caranci E, Di Lullo L.
PMID: 25083308
J Gastrointest Oncol. 2014 Aug;5(4):E65-7. doi: 10.3978/j.issn.2078-6891.2014.021.

INTRODUCTION: Hepatocellular carcinoma (HCC) is one of the most common solid tumors in the world. HCC muscle and cutaneous metastases are rare and can occur by hematogenous spread or following surgical procedures performed for diagnostic or therapeutic aims.CASE STUDY:...

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Traficante D, Assalone P, Tomei F, et al. A case report of HCC cutaneous metastasis. J Gastrointest Oncol. 2014;5(4):E65-7doi: 10.3978/j.issn.2078-6891.2014.021.
Traficante, D., Assalone, P., Tomei, F., Calista, F., Falleti, J., Caranci, E., & Di Lullo, L. (2014). A case report of HCC cutaneous metastasis. Journal of gastrointestinal oncology, 5(4), E65-7. https://doi.org/10.3978/j.issn.2078-6891.2014.021
Traficante, Divina, et al. "A case report of HCC cutaneous metastasis." Journal of gastrointestinal oncology vol. 5,4 (2014): E65-7. doi: https://doi.org/10.3978/j.issn.2078-6891.2014.021
Traficante D, Assalone P, Tomei F, Calista F, Falleti J, Caranci E, Di Lullo L. A case report of HCC cutaneous metastasis. J Gastrointest Oncol. 2014 Aug;5(4):E65-7. doi: 10.3978/j.issn.2078-6891.2014.021. PMID: 25083308; PMCID: PMC4110500.
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Progressive decline of glucocerebrosidase in aging and Parkinson's disease.

Annals of clinical and translational neurology

Rocha EM, Smith GA, Park E, Cao H, Brown E, Hallett P, Isacson O.
PMID: 25909088
Ann Clin Transl Neurol. 2015 Apr;2(4):433-8. doi: 10.1002/acn3.177. Epub 2015 Feb 06.

The principal risk factor for developing most adult onset neurodegenerative diseases is aging, with incidence rising significantly after age 50. Despite research efforts, the causes of Parkinson's disease (PD) remain unknown. As neurons age, they show signs of diminished...

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Rocha EM, Smith GA, Park E, et al. Progressive decline of glucocerebrosidase in aging and Parkinson's disease. Ann Clin Transl Neurol. 2015;2(4):433-8doi: 10.1002/acn3.177.
Rocha, E. M., Smith, G. A., Park, E., Cao, H., Brown, E., Hallett, P., & Isacson, O. (2015). Progressive decline of glucocerebrosidase in aging and Parkinson's disease. Annals of clinical and translational neurology, 2(4), 433-8. https://doi.org/10.1002/acn3.177
Rocha, Emily M, et al. "Progressive decline of glucocerebrosidase in aging and Parkinson's disease." Annals of clinical and translational neurology vol. 2,4 (2015): 433-8. doi: https://doi.org/10.1002/acn3.177
Rocha EM, Smith GA, Park E, Cao H, Brown E, Hallett P, Isacson O. Progressive decline of glucocerebrosidase in aging and Parkinson's disease. Ann Clin Transl Neurol. 2015 Apr;2(4):433-8. doi: 10.1002/acn3.177. Epub 2015 Feb 06. PMID: 25909088; PMCID: PMC4402088.
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Corrigendum: PNPLA3 Gene Polymorphism Is Associated With Predisposition to and Severity of Alcoholic Liver Disease.

The American journal of gastroenterology

Salameh H, Raff E, Erwin A, Seth D, Nischalke HD, Falleti E, Burza MA, Leathert J, Romeo S, Molinaro A, Corradini SG, Toniutto P, Ulrich S, Daly A, Day CP, Kuo YF, Singal AK.
PMID: 26148270
Am J Gastroenterol. 2015 Jul;110(7):1121. doi: 10.1038/ajg.2015.181.

No abstract available.

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Salameh H, Raff E, Erwin A, et al. Corrigendum: PNPLA3 Gene Polymorphism Is Associated With Predisposition to and Severity of Alcoholic Liver Disease. Am J Gastroenterol. 2015;110(7):1121doi: 10.1038/ajg.2015.181.
Salameh, H., Raff, E., Erwin, A., Seth, D., Nischalke, H. D., Falleti, E., Burza, M. A., Leathert, J., Romeo, S., Molinaro, A., Corradini, S. G., Toniutto, P., Ulrich, S., Daly, A., Day, C. P., Kuo, Y. F., & Singal, A. K. (2015). Corrigendum: PNPLA3 Gene Polymorphism Is Associated With Predisposition to and Severity of Alcoholic Liver Disease. The American journal of gastroenterology, 110(7), 1121. https://doi.org/10.1038/ajg.2015.181
Salameh, Habeeb, et al. "Corrigendum: PNPLA3 Gene Polymorphism Is Associated With Predisposition to and Severity of Alcoholic Liver Disease." The American journal of gastroenterology vol. 110,7 (2015): 1121. doi: https://doi.org/10.1038/ajg.2015.181
Salameh H, Raff E, Erwin A, Seth D, Nischalke HD, Falleti E, Burza MA, Leathert J, Romeo S, Molinaro A, Corradini SG, Toniutto P, Ulrich S, Daly A, Day CP, Kuo YF, Singal AK. Corrigendum: PNPLA3 Gene Polymorphism Is Associated With Predisposition to and Severity of Alcoholic Liver Disease. Am J Gastroenterol. 2015 Jul;110(7):1121. doi: 10.1038/ajg.2015.181. PMID: 26148270.
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Effective bond orders from two-step spin-orbit coupling approaches: the I2, At2, IO(+), and AtO(+) case studies.

The Journal of chemical physics

Maurice R, Réal F, Gomes AS, Vallet V, Montavon G, Galland N.
PMID: 25747079
J Chem Phys. 2015 Mar 07;142(9):094305. doi: 10.1063/1.4913738.

The nature of chemical bonds in heavy main-group diatomics is discussed from the viewpoint of effective bond orders, which are computed from spin-orbit wave functions resulting from spin-orbit configuration interaction calculations. The reliability of the relativistic correlated wave functions...

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Maurice R, Réal F, Gomes AS, et al. Effective bond orders from two-step spin-orbit coupling approaches: the I2, At2, IO(+), and AtO(+) case studies. J Chem Phys. 2015;142(9):094305doi: 10.1063/1.4913738.
Maurice, R., Réal, F., Gomes, A. S., Vallet, V., Montavon, G., & Galland, N. (2015). Effective bond orders from two-step spin-orbit coupling approaches: the I2, At2, IO(+), and AtO(+) case studies. The Journal of chemical physics, 142(9), 094305. https://doi.org/10.1063/1.4913738
Maurice, Rémi, et al. "Effective bond orders from two-step spin-orbit coupling approaches: the I2, At2, IO(+), and AtO(+) case studies." The Journal of chemical physics vol. 142,9 (2015): 094305. doi: https://doi.org/10.1063/1.4913738
Maurice R, Réal F, Gomes AS, Vallet V, Montavon G, Galland N. Effective bond orders from two-step spin-orbit coupling approaches: the I2, At2, IO(+), and AtO(+) case studies. J Chem Phys. 2015 Mar 07;142(9):094305. doi: 10.1063/1.4913738. PMID: 25747079.
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Ratios of central venous-to-arterial carbon dioxide content or tension to arteriovenous oxygen content are better markers of global anaerobic metabolism than lactate in septic shock patients.

Annals of intensive care

Mallat J, Lemyze M, Meddour M, Pepy F, Gasan G, Barrailler S, Durville E, Temime J, Vangrunderbeeck N, Tronchon L, Vallet B, Thevenin D.
PMID: 26842697
Ann Intensive Care. 2016 Dec;6(1):10. doi: 10.1186/s13613-016-0110-3. Epub 2016 Feb 03.

BACKGROUND: To evaluate the ability of the central venous-to-arterial CO2 content and tension differences to arteriovenous oxygen content difference ratios (∆ContCO2/∆ContO2 and ∆PCO2/∆ContO2, respectively), blood lactate concentration, and central venous oxygen saturation (ScvO2) to detect the presence of global...

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Mallat J, Lemyze M, Meddour M, et al. Ratios of central venous-to-arterial carbon dioxide content or tension to arteriovenous oxygen content are better markers of global anaerobic metabolism than lactate in septic shock patients. Ann Intensive Care. 2016;6(1):10doi: 10.1186/s13613-016-0110-3.
Mallat, J., Lemyze, M., Meddour, M., Pepy, F., Gasan, G., Barrailler, S., Durville, E., Temime, J., Vangrunderbeeck, N., Tronchon, L., Vallet, B., & Thevenin, D. (2016). Ratios of central venous-to-arterial carbon dioxide content or tension to arteriovenous oxygen content are better markers of global anaerobic metabolism than lactate in septic shock patients. Annals of intensive care, 6(1), 10. https://doi.org/10.1186/s13613-016-0110-3
Mallat, Jihad, et al. "Ratios of central venous-to-arterial carbon dioxide content or tension to arteriovenous oxygen content are better markers of global anaerobic metabolism than lactate in septic shock patients." Annals of intensive care vol. 6,1 (2016): 10. doi: https://doi.org/10.1186/s13613-016-0110-3
Mallat J, Lemyze M, Meddour M, Pepy F, Gasan G, Barrailler S, Durville E, Temime J, Vangrunderbeeck N, Tronchon L, Vallet B, Thevenin D. Ratios of central venous-to-arterial carbon dioxide content or tension to arteriovenous oxygen content are better markers of global anaerobic metabolism than lactate in septic shock patients. Ann Intensive Care. 2016 Dec;6(1):10. doi: 10.1186/s13613-016-0110-3. Epub 2016 Feb 03. PMID: 26842697; PMCID: PMC4740480.
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Detecting gene signature activation in breast cancer in an absolute, single-patient manner.

Breast cancer research : BCR

Paquet ER, Lesurf R, Tofigh A, Dumeaux V, Hallett MT.
PMID: 28327201
Breast Cancer Res. 2017 Mar 21;19(1):32. doi: 10.1186/s13058-017-0824-7.

BACKGROUND: The ability to reliably identify the state (activated, repressed, or latent) of any molecular process in the tumor of a patient from an individual whole-genome gene expression profile obtained from microarray or RNA sequencing (RNA-seq) promises important clinical...

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Paquet ER, Lesurf R, Tofigh A, et al. Detecting gene signature activation in breast cancer in an absolute, single-patient manner. Breast Cancer Res. 2017;19(1):32doi: 10.1186/s13058-017-0824-7.
Paquet, E. R., Lesurf, R., Tofigh, A., Dumeaux, V., & Hallett, M. T. (2017). Detecting gene signature activation in breast cancer in an absolute, single-patient manner. Breast cancer research : BCR, 19(1), 32. https://doi.org/10.1186/s13058-017-0824-7
Paquet, E R, et al. "Detecting gene signature activation in breast cancer in an absolute, single-patient manner." Breast cancer research : BCR vol. 19,1 (2017): 32. doi: https://doi.org/10.1186/s13058-017-0824-7
Paquet ER, Lesurf R, Tofigh A, Dumeaux V, Hallett MT. Detecting gene signature activation in breast cancer in an absolute, single-patient manner. Breast Cancer Res. 2017 Mar 21;19(1):32. doi: 10.1186/s13058-017-0824-7. PMID: 28327201; PMCID: PMC5361722.
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Matricryptins Network with Matricellular Receptors at the Surface of Endothelial and Tumor Cells.

Frontiers in pharmacology

Ricard-Blum S, Vallet SD.
PMID: 26869928
Front Pharmacol. 2016 Feb 04;7:11. doi: 10.3389/fphar.2016.00011. eCollection 2016.

The extracellular matrix (ECM) is a source of bioactive fragments called matricryptins or matrikines resulting from the proteolytic cleavage of extracellular proteins (e.g., collagens, elastin, and laminins) and proteoglycans (e.g., perlecan). Matrix metalloproteinases (MMPs), cathepsins, and bone-morphogenetic protein-1 release...

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Ricard-Blum S, Vallet SD. Matricryptins Network with Matricellular Receptors at the Surface of Endothelial and Tumor Cells. Front Pharmacol. 2016;7:11doi: 10.3389/fphar.2016.00011.
Ricard-Blum, S., & Vallet, S. D. (2016). Matricryptins Network with Matricellular Receptors at the Surface of Endothelial and Tumor Cells. Frontiers in pharmacology, 711. https://doi.org/10.3389/fphar.2016.00011
Ricard-Blum, Sylvie, and Vallet, Sylvain D. "Matricryptins Network with Matricellular Receptors at the Surface of Endothelial and Tumor Cells." Frontiers in pharmacology vol. 7 (2016): 11. doi: https://doi.org/10.3389/fphar.2016.00011
Ricard-Blum S, Vallet SD. Matricryptins Network with Matricellular Receptors at the Surface of Endothelial and Tumor Cells. Front Pharmacol. 2016 Feb 04;7:11. doi: 10.3389/fphar.2016.00011. eCollection 2016. PMID: 26869928; PMCID: PMC4740388.
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