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Showing 13 to 24 of 143 entries
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Calculating hyperfine couplings in large ionic crystals containing hundreds of QM atoms: subsystem DFT is the key.

The journal of physical chemistry. B

Kevorkyants R, Wang X, Close DM, Pavanello M.
PMID: 24131238
J Phys Chem B. 2013 Nov 14;117(45):13967-74. doi: 10.1021/jp405154d. Epub 2013 Oct 31.

We present an application of the linear scaling frozen density embedding (FDE) formulation of subsystem DFT to the calculation of isotropic hyperfine coupling constants (hfcc's) of atoms belonging to a guanine radical cation embedded in a guanine hydrochloride monohydrate...

An etiologic prediction model incorporating biomarkers to predict the bladder cancer risk associated with occupational exposure to aromatic amines: a pilot study.

Journal of occupational medicine and toxicology (London, England)

Mastrangelo G, Carta A, Arici C, Pavanello S, Porru S.
PMID: 28804505
J Occup Med Toxicol. 2017 Aug 08;12:23. doi: 10.1186/s12995-017-0167-4. eCollection 2017.

BACKGROUND: No etiological prediction model incorporating biomarkers is available to predict bladder cancer risk associated with occupational exposure to aromatic amines.METHODS: Cases were 199 bladder cancer patients. Clinical, laboratory and genetic data were predictors in logistic regression models (full...

The Energetics and Physiological Impact of Cohesin Extrusion.

Cell

Vian L, Pękowska A, Rao SSP, Kieffer-Kwon KR, Jung S, Baranello L, Huang SC, El Khattabi L, Dose M, Pruett N, Sanborn AL, Canela A, Maman Y, Oksanen A, Resch W, Li X, Lee B, Kovalchuk AL, Tang Z, Nelson S, Di Pierro M, Cheng RR, Machol I, St Hilaire BG, Durand NC, Shamim MS, Stamenova EK, Onuchic JN, Ruan Y, Nussenzweig A, Levens D, Aiden EL, Casellas R.
PMID: 30241609
Cell. 2018 Sep 20;175(1):292-294. doi: 10.1016/j.cell.2018.09.002.

No abstract available.

Moderate Physical Training Ameliorates Cardiovascular Dysfunction Induced by High Fat Diet After Cessation of Training in Adult Rats.

Frontiers in physiology

Tófolo LP, Rinaldi W, Gôngora AB, Matiusso CCI, Pavanello A, Malta A, de Almeida DL, Ribeiro TA, Oliveira AR, Peres MNC, Armitage JA, Mathias PCF, Palma-Rigo K.
PMID: 30930783
Front Physiol. 2019 Mar 12;10:170. doi: 10.3389/fphys.2019.00170. eCollection 2019.

We aimed to test whether moderate physical training can induce long-lasting protection against cardiovascular risk factors induced by high fat diet (HFD) intake, even after cessation of training. 90-days-old Wistar rats were submitted to a sedentary lifestyle or moderate...

Tuning the electronic properties of the γ-Al.

Physical chemistry chemical physics : PCCP

Acikgoz M, Khoshi MR, Harrell J, Genova A, Chawla R, He H, Pavanello M.
PMID: 31241103
Phys Chem Chem Phys. 2019 Jul 10;21(27):15080-15088. doi: 10.1039/c9cp03105g.

Tuning the electronic properties of oxide surfaces is of pivotal importance, because they find applicability in a variety of industrial processes, including catalysis. Currently, the industrial protocols for synthesizing oxide surfaces are limited to only partial control of the...

Development of a comprehensive noninvasive prenatal test.

Genetics and molecular biology

Malcher C, Yamamoto GL, Burnham P, Ezquina SAM, Lourenço NCV, Balkassmi S, Antonio DSM, Hsia GSP, Gollop T, Pavanello RC, Lopes MA, Bakker E, Zatz M, Bertola D, Vlaminck I, Passos-Bueno MR.
PMID: 30043834
Genet Mol Biol. 2018 Jul/Sept.;41(3):545-554. doi: 10.1590/1678-4685-GMB-2017-0177. Epub 2018 Jul 16.

Our aim was to develop and apply a comprehensive noninvasive prenatal test (NIPT) by using high-coverage targeted next-generation sequencing to estimate fetal fraction, determine fetal sex, and detect trisomy and monogenic disease without parental genotype information. We analyzed 45...

Correction to: Nutraceutical approach for the management of cardiovascular risk - a combination containing the probiotic Bifidobacterium longum BB536 and red yeast rice extract: results from a randomized, double-blind, placebo-controlled study.

Nutrition journal

Ruscica M, Pavanello C, Gandini S, Macchi C, Botta M, Dall'Orto D, Del Puppo M, Bertolotti M, Bosisio R, Mombelli G, Sirtori CR, Calabresi L, Magni P.
PMID: 31500629
Nutr J. 2019 Sep 09;18(1):54. doi: 10.1186/s12937-019-0483-x.

Following publication of the original article [1], the authors reported an error in the affiliation of the third author, Sara Gandini. The correct affiliation should read: Division of Epidemiology and Biostatistics, IEO, European Institute of Oncology IRCCS, Milan, Italy.

Erratum: "Low-lying excited states by constrained DFT" [J. Chem. Phys. 148, 144103 (2018)].

The Journal of chemical physics

Ramos P, Pavanello M.
PMID: 32171205
J Chem Phys. 2020 Mar 14;152(10):109902. doi: 10.1063/5.0004729.

No abstract available.

CRMP4-mediated fornix development involves semaphorin-3E signaling pathway.

eLife

Boulan B, Ravanello C, Peyrel A, Bosc C, Delphin C, Appaix F, Denarier E, Kraut A, Jacquier-Sarlin M, Fournier A, Andrieux A, Gory-Fauré S, Deloulme JC.
PMID: 34860155
Elife. 2021 Dec 03;10. doi: 10.7554/eLife.70361. Epub 2021 Dec 03.

Neurodevelopmental axonal pathfinding plays a central role in correct brain wiring and subsequent cognitive abilities. Within the growth cone, various intracellular effectors transduce axonal guidance signals by remodeling the cytoskeleton. Semaphorin-3E (Sema3E) is a guidance cue implicated in development...

Technical description of a novel device for external ventricular drainage in neonatal and pediatric patients: Results from a single referral center experience.

Clinical neurology and neurosurgery

Consales A, Di Perna G, De Angelis LC, Pacetti M, Balestrino A, Ravegnani M, Pavanello M, Secci F, Ramenghi LA, Piatelli G, Cama A.
PMID: 34973652
Clin Neurol Neurosurg. 2021 Dec 21;213:107100. doi: 10.1016/j.clineuro.2021.107100. Epub 2021 Dec 21.

BACKGROUND: Since external ventricular drainage (EVD) related infections are usually due to skin flora, an extradural intra/extra-cranial accessory device, developed for pediatric patients under three years of age undergoing EVD positioning, is described. The aim of this paper is...

Vasculoprotective properties of plasma lipoproteins from brown bears (Ursus arctos).

Journal of lipid research

Pedrelli M, Parini P, Kindberg J, Arnemo JM, Bjorkhem I, Aasa U, Westerståhl M, Walentinsson A, Pavanello C, Turri M, Calabresi L, Öörni K, Camejo G, Fröbert O, Hurt-Camejo E.
PMID: 33713671
J Lipid Res. 2021 Mar 11;62:100065. doi: 10.1016/j.jlr.2021.100065. Epub 2021 Mar 11.

Plasma cholesterol and triglyceride (TG) levels are twice as high in hibernating brown bears (Ursus arctos) than healthy humans. Yet, bears display no signs of early stage atherosclerosis development when adult. To explore this apparent paradox, we analyzed plasma...

Structure of the human Ccr4-Not nuclease module using X-ray crystallography and electron paramagnetic resonance spectroscopy distance measurements.

Protein science : a publication of the Protein Society

Zhang Q, Pavanello L, Potapov A, Bartlam M, Winkler GS.
PMID: 34923703
Protein Sci. 2021 Dec 19; doi: 10.1002/pro.4262. Epub 2021 Dec 19.

Regulated degradation of mature, cytoplasmic mRNA is a key step in eukaryotic gene regulation. This process is typically initiated by the recruitment of deadenylase enzymes by cis-acting elements in the 3' untranslated region resulting in the shortening and removal...

Showing 13 to 24 of 143 entries