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STRONG: metagenomics strain resolution on assembly graphs.

Genome biology

Quince C, Nurk S, Raguideau S, James R, Soyer OS, Summers JK, Limasset A, Eren AM, Chikhi R, Darling AE.
PMID: 34311761
Genome Biol. 2021 Jul 26;22(1):214. doi: 10.1186/s13059-021-02419-7.

We introduce STrain Resolution ON assembly Graphs (STRONG), which identifies strains de novo, from multiple metagenome samples. STRONG performs coassembly, and binning into metagenome assembled genomes (MAGs), and stores the coassembly graph prior to variant simplification. This enables the...

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Quince C, Nurk S, Raguideau S, et al. STRONG: metagenomics strain resolution on assembly graphs. Genome Biol. 2021;22(1):214doi: 10.1186/s13059-021-02419-7.
Quince, C., Nurk, S., Raguideau, S., James, R., Soyer, O. S., Summers, J. K., Limasset, A., Eren, A. M., Chikhi, R., & Darling, A. E. (2021). STRONG: metagenomics strain resolution on assembly graphs. Genome biology, 22(1), 214. https://doi.org/10.1186/s13059-021-02419-7
Quince, Christopher, et al. "STRONG: metagenomics strain resolution on assembly graphs." Genome biology vol. 22,1 (2021): 214. doi: https://doi.org/10.1186/s13059-021-02419-7
Quince C, Nurk S, Raguideau S, James R, Soyer OS, Summers JK, Limasset A, Eren AM, Chikhi R, Darling AE. STRONG: metagenomics strain resolution on assembly graphs. Genome Biol. 2021 Jul 26;22(1):214. doi: 10.1186/s13059-021-02419-7. PMID: 34311761; PMCID: PMC8311964.
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H3K27Ac modification and gene expression in psoriasis.

Journal of dermatological science

Masalha M, Ben-Dov IZ, Ram O, Meningher T, Jacob-Hirsch J, Kassem R, Sidi Y, Avni D.
PMID: 34281744
J Dermatol Sci. 2021 Aug;103(2):93-100. doi: 10.1016/j.jdermsci.2021.07.003. Epub 2021 Jul 06.

BACKGROUND: Numerous alterations in gene expression have been described in psoriatic lesions compared to uninvolved or healthy skin. However, the mechanisms which induce this altered expression remain unclear. Epigenetic modifications play a key role in regulating genes' expression. Only...

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Masalha M, Ben-Dov IZ, Ram O, et al. H3K27Ac modification and gene expression in psoriasis. J Dermatol Sci. 2021;103(2):93-100doi: 10.1016/j.jdermsci.2021.07.003.
Masalha, M., Ben-Dov, I. Z., Ram, O., Meningher, T., Jacob-Hirsch, J., Kassem, R., Sidi, Y., & Avni, D. (2021). H3K27Ac modification and gene expression in psoriasis. Journal of dermatological science, 103(2), 93-100. https://doi.org/10.1016/j.jdermsci.2021.07.003
Masalha, Moamen, et al. "H3K27Ac modification and gene expression in psoriasis." Journal of dermatological science vol. 103,2 (2021): 93-100. doi: https://doi.org/10.1016/j.jdermsci.2021.07.003
Masalha M, Ben-Dov IZ, Ram O, Meningher T, Jacob-Hirsch J, Kassem R, Sidi Y, Avni D. H3K27Ac modification and gene expression in psoriasis. J Dermatol Sci. 2021 Aug;103(2):93-100. doi: 10.1016/j.jdermsci.2021.07.003. Epub 2021 Jul 06. PMID: 34281744.
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Hypothesis and Theory: Evaluating the Co-Evolution of the Melanocortin-2 Receptor and the Accessory Protein MRAP1.

Frontiers in endocrinology

Dores RM, Chapa E.
PMID: 34790168
Front Endocrinol (Lausanne). 2021 Nov 01;12:747843. doi: 10.3389/fendo.2021.747843. eCollection 2021.

The melanocortin receptors (MCRs) and the MRAP accessory proteins belong to distinct gene families that are unique to the chordates. During the radiation of the chordates, the melancortin-2 receptor paralog (MC2R) and the MRAP1 paralog (melanocortin-2 receptor accessory protein...

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Dores RM, Chapa E. Hypothesis and Theory: Evaluating the Co-Evolution of the Melanocortin-2 Receptor and the Accessory Protein MRAP1. Front Endocrinol (Lausanne). 2021;12:747843doi: 10.3389/fendo.2021.747843.
Dores, R. M., & Chapa, E. (2021). Hypothesis and Theory: Evaluating the Co-Evolution of the Melanocortin-2 Receptor and the Accessory Protein MRAP1. Frontiers in endocrinology, 12747843. https://doi.org/10.3389/fendo.2021.747843
Dores, Robert M, and Chapa, Emilia. "Hypothesis and Theory: Evaluating the Co-Evolution of the Melanocortin-2 Receptor and the Accessory Protein MRAP1." Frontiers in endocrinology vol. 12 (2021): 747843. doi: https://doi.org/10.3389/fendo.2021.747843
Dores RM, Chapa E. Hypothesis and Theory: Evaluating the Co-Evolution of the Melanocortin-2 Receptor and the Accessory Protein MRAP1. Front Endocrinol (Lausanne). 2021 Nov 01;12:747843. doi: 10.3389/fendo.2021.747843. eCollection 2021. PMID: 34790168; PMCID: PMC8591103.
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Commentary on: The Layered Anatomy of the Nose: An Ultrasound-Based Investigation.

Aesthetic surgery journal

Tepper OM, Choy A.
PMID: 34752606
Aesthet Surg J. 2021 Nov 09; doi: 10.1093/asj/sjab378. Epub 2021 Nov 09.

No abstract available.

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Tepper OM, Choy A. Commentary on: The Layered Anatomy of the Nose: An Ultrasound-Based Investigation. Aesthet Surg J. 2021;doi: 10.1093/asj/sjab378.
Tepper, O. M., & Choy, A. (2021). Commentary on: The Layered Anatomy of the Nose: An Ultrasound-Based Investigation. Aesthetic surgery journal, . https://doi.org/10.1093/asj/sjab378
Tepper, Oren M, and Choy, Alexa. "Commentary on: The Layered Anatomy of the Nose: An Ultrasound-Based Investigation." Aesthetic surgery journal vol. (2021). doi: https://doi.org/10.1093/asj/sjab378
Tepper OM, Choy A. Commentary on: The Layered Anatomy of the Nose: An Ultrasound-Based Investigation. Aesthet Surg J. 2021 Nov 09; doi: 10.1093/asj/sjab378. Epub 2021 Nov 09. PMID: 34752606.
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[No title available]

PeerJ

Goren M, Stern N.
PMID: 34692246
PeerJ. 2021 Sep 28;9:e12136. doi: 10.7717/peerj.12136. eCollection 2021.

A new species of shrimp-goby was collected at depths of 60-80 m off the southern Israeli Mediterranean coast. A unique 'DNA barcoding' signature (mtDNA

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Goren M, Stern N. . PeerJ. 2021;9:e12136doi: 10.7717/peerj.12136.
Goren, M., & Stern, N. (2021). . PeerJ, 9e12136. https://doi.org/10.7717/peerj.12136
Goren, Menachem, and Stern, Nir. "." PeerJ vol. 9 (2021): e12136. doi: https://doi.org/10.7717/peerj.12136
Goren M, Stern N. . PeerJ. 2021 Sep 28;9:e12136. doi: 10.7717/peerj.12136. eCollection 2021. PMID: 34692246; PMCID: PMC8485833.
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Light-driven synthesis of hollow platinum nanospheres.

Chemical communications (Cambridge, England)

Garcia RM, Song Y, Dorin RM, Wang H, Li P, Qiu Y, van Swol F, Shelnutt JA.
PMID: 18506235
Chem Commun (Camb). 2008 Jun 14;(22):2535-7. doi: 10.1039/b801695j. Epub 2008 Apr 01.

Hollow platinum nanospheres that are porous and have uniform shell thickness are prepared by templating platinum growth on polystyrene beads with an adsorbed porphyrin photocatalyst irradiated by visible light.

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Garcia RM, Song Y, Dorin RM, et al. Light-driven synthesis of hollow platinum nanospheres. Chem Commun (Camb). 2008;(22):2535-7doi: 10.1039/b801695j.
Garcia, R. M., Song, Y., Dorin, R. M., Wang, H., Li, P., Qiu, Y., van Swol, F., & Shelnutt, J. A. (2008). Light-driven synthesis of hollow platinum nanospheres. Chemical communications (Cambridge, England), (22), 2535-7. https://doi.org/10.1039/b801695j
Garcia, Robert M, et al. "Light-driven synthesis of hollow platinum nanospheres." Chemical communications (Cambridge, England) vol. ,22 (2008): 2535-7. doi: https://doi.org/10.1039/b801695j
Garcia RM, Song Y, Dorin RM, Wang H, Li P, Qiu Y, van Swol F, Shelnutt JA. Light-driven synthesis of hollow platinum nanospheres. Chem Commun (Camb). 2008 Jun 14;(22):2535-7. doi: 10.1039/b801695j. Epub 2008 Apr 01. PMID: 18506235.
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Guardian of the Genome: An Alternative RAG/Transib Co-Evolution Hypothesis for the Origin of V(D)J Recombination.

Frontiers in immunology

Yakovenko I, Agronin J, Smith LC, Oren M.
PMID: 34394111
Front Immunol. 2021 Jul 28;12:709165. doi: 10.3389/fimmu.2021.709165. eCollection 2021.

The appearance of adaptive immunity in jawed vertebrates is termed the immunological 'Big Bang' because of the short evolutionary time over which it developed. Underlying it is the recombination activating gene (RAG)

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Yakovenko I, Agronin J, Smith LC, et al. Guardian of the Genome: An Alternative RAG/Transib Co-Evolution Hypothesis for the Origin of V(D)J Recombination. Front Immunol. 2021;12:709165doi: 10.3389/fimmu.2021.709165.
Yakovenko, I., Agronin, J., Smith, L. C., & Oren, M. (2021). Guardian of the Genome: An Alternative RAG/Transib Co-Evolution Hypothesis for the Origin of V(D)J Recombination. Frontiers in immunology, 12709165. https://doi.org/10.3389/fimmu.2021.709165
Yakovenko, Iryna, et al. "Guardian of the Genome: An Alternative RAG/Transib Co-Evolution Hypothesis for the Origin of V(D)J Recombination." Frontiers in immunology vol. 12 (2021): 709165. doi: https://doi.org/10.3389/fimmu.2021.709165
Yakovenko I, Agronin J, Smith LC, Oren M. Guardian of the Genome: An Alternative RAG/Transib Co-Evolution Hypothesis for the Origin of V(D)J Recombination. Front Immunol. 2021 Jul 28;12:709165. doi: 10.3389/fimmu.2021.709165. eCollection 2021. PMID: 34394111; PMCID: PMC8355894.
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Showing 229 to 235 of 235 entries