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Changes in hippocampal inflammatory-related and redox enzyme genes in response to sub-acute restraint stress: Additional dataset.

Data in brief

Chen HC, Lee JK, Yip T, Sernia C, Lavidis NA, Spiers JG.
PMID: 30761344
Data Brief. 2018 Nov 28;21:2627-2632. doi: 10.1016/j.dib.2018.11.120. eCollection 2018 Dec.

This data article presents complementary results pertaining to the research article entitled "Sub-acute restraint stress progressively increases oxidative/nitrosative stress and inflammatory markers while transiently upregulating antioxidant gene expression in the rat hippocampus" (Chen et al., 2018). The present article...

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Chen HC, Lee JK, Yip T, et al. Changes in hippocampal inflammatory-related and redox enzyme genes in response to sub-acute restraint stress: Additional dataset. Data Brief. 2018;21:2627-2632doi: 10.1016/j.dib.2018.11.120.
Chen, H. C., Lee, J. K., Yip, T., Sernia, C., Lavidis, N. A., & Spiers, J. G. (2018). Changes in hippocampal inflammatory-related and redox enzyme genes in response to sub-acute restraint stress: Additional dataset. Data in brief, 212627-2632. https://doi.org/10.1016/j.dib.2018.11.120
Chen, Hsiao-Jou Cortina, et al. "Changes in hippocampal inflammatory-related and redox enzyme genes in response to sub-acute restraint stress: Additional dataset." Data in brief vol. 21 (2018): 2627-2632. doi: https://doi.org/10.1016/j.dib.2018.11.120
Chen HC, Lee JK, Yip T, Sernia C, Lavidis NA, Spiers JG. Changes in hippocampal inflammatory-related and redox enzyme genes in response to sub-acute restraint stress: Additional dataset. Data Brief. 2018 Nov 28;21:2627-2632. doi: 10.1016/j.dib.2018.11.120. eCollection 2018 Dec. PMID: 30761344; PMCID: PMC6290245.
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Machine learning: applications of artificial intelligence to imaging and diagnosis.

Biophysical reviews

Nichols JA, Herbert Chan HW, Baker MAB.
PMID: 30182201
Biophys Rev. 2019 Feb;11(1):111-118. doi: 10.1007/s12551-018-0449-9. Epub 2018 Sep 04.

Machine learning (ML) is a form of artificial intelligence which is placed to transform the twenty-first century. Rapid, recent progress in its underlying architecture and algorithms and growth in the size of datasets have led to increasing computer competence...

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Nichols JA, Herbert Chan HW, Baker MAB. Machine learning: applications of artificial intelligence to imaging and diagnosis. Biophys Rev. 2018;11(1):111-118doi: 10.1007/s12551-018-0449-9.
Nichols, J. A., Herbert Chan, H. W., & Baker, M. A. B. (2019). Machine learning: applications of artificial intelligence to imaging and diagnosis. Biophysical reviews, 11(1), 111-118. https://doi.org/10.1007/s12551-018-0449-9
Nichols, James A, et al. "Machine learning: applications of artificial intelligence to imaging and diagnosis." Biophysical reviews vol. 11,1 (2019): 111-118. doi: https://doi.org/10.1007/s12551-018-0449-9
Nichols JA, Herbert Chan HW, Baker MAB. Machine learning: applications of artificial intelligence to imaging and diagnosis. Biophys Rev. 2019 Feb;11(1):111-118. doi: 10.1007/s12551-018-0449-9. Epub 2018 Sep 04. PMID: 30182201; PMCID: PMC6381354.
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Motor Areas Show Altered Dendritic Structure in an Amyotrophic Lateral Sclerosis Mouse Model.

Frontiers in neuroscience

Fogarty MJ, Mu EWH, Lavidis NA, Noakes PG, Bellingham MC.
PMID: 29163013
Front Neurosci. 2017 Nov 01;11:609. doi: 10.3389/fnins.2017.00609. eCollection 2017.

No abstract available.

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Fogarty MJ, Mu EWH, Lavidis NA, et al. Motor Areas Show Altered Dendritic Structure in an Amyotrophic Lateral Sclerosis Mouse Model. Front Neurosci. 2017;11:609doi: 10.3389/fnins.2017.00609.
Fogarty, M. J., Mu, E. W. H., Lavidis, N. A., Noakes, P. G., & Bellingham, M. C. (2017). Motor Areas Show Altered Dendritic Structure in an Amyotrophic Lateral Sclerosis Mouse Model. Frontiers in neuroscience, 11609. https://doi.org/10.3389/fnins.2017.00609
Fogarty, Matthew J, et al. "Motor Areas Show Altered Dendritic Structure in an Amyotrophic Lateral Sclerosis Mouse Model." Frontiers in neuroscience vol. 11 (2017): 609. doi: https://doi.org/10.3389/fnins.2017.00609
Fogarty MJ, Mu EWH, Lavidis NA, Noakes PG, Bellingham MC. Motor Areas Show Altered Dendritic Structure in an Amyotrophic Lateral Sclerosis Mouse Model. Front Neurosci. 2017 Nov 01;11:609. doi: 10.3389/fnins.2017.00609. eCollection 2017. PMID: 29163013; PMCID: PMC5672020.
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Reconstructing the emergence of a lethal infectious disease of wildlife supports a key role for spread through translocations by humans.

Proceedings. Biological sciences

Price SJ, Garner TW, Cunningham AA, Langton TE, Nichols RA.
PMID: 27683363
Proc Biol Sci. 2016 Sep 28;283(1839). doi: 10.1098/rspb.2016.0952.

There have been few reconstructions of wildlife disease emergences, despite their extensive impact on biodiversity and human health. This is in large part attributable to the lack of structured and robust spatio-temporal datasets. We overcame logistical problems of obtaining...

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Price SJ, Garner TW, Cunningham AA, et al. Reconstructing the emergence of a lethal infectious disease of wildlife supports a key role for spread through translocations by humans. Proc Biol Sci. 2016;283(1839)doi: 10.1098/rspb.2016.0952.
Price, S. J., Garner, T. W., Cunningham, A. A., Langton, T. E., & Nichols, R. A. (2016). Reconstructing the emergence of a lethal infectious disease of wildlife supports a key role for spread through translocations by humans. Proceedings. Biological sciences, 283(1839), . https://doi.org/10.1098/rspb.2016.0952
Price, Stephen J, et al. "Reconstructing the emergence of a lethal infectious disease of wildlife supports a key role for spread through translocations by humans." Proceedings. Biological sciences vol. 283,1839 (2016). doi: https://doi.org/10.1098/rspb.2016.0952
Price SJ, Garner TW, Cunningham AA, Langton TE, Nichols RA. Reconstructing the emergence of a lethal infectious disease of wildlife supports a key role for spread through translocations by humans. Proc Biol Sci. 2016 Sep 28;283(1839). doi: 10.1098/rspb.2016.0952. PMID: 27683363; PMCID: PMC5046891.
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Trisections of 4-manifolds with boundary.

Proceedings of the National Academy of Sciences of the United States of America

Castro NA, Gay DT, Pinzón-Caicedo J.
PMID: 30348804
Proc Natl Acad Sci U S A. 2018 Oct 23;115(43):10861-10868. doi: 10.1073/pnas.1717170115. Epub 2018 Oct 22.

Given a handle decomposition of a 4-manifold with boundary and an open book decomposition of the boundary, we show how to produce a trisection diagram of a trisection of the 4-manifold inducing the given open book. We do this...

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Castro NA, Gay DT, Pinzón-Caicedo J. Trisections of 4-manifolds with boundary. Proc Natl Acad Sci U S A. 2018;115(43):10861-10868doi: 10.1073/pnas.1717170115.
Castro, N. A., Gay, D. T., & Pinzón-Caicedo, J. (2018). Trisections of 4-manifolds with boundary. Proceedings of the National Academy of Sciences of the United States of America, 115(43), 10861-10868. https://doi.org/10.1073/pnas.1717170115
Castro, Nickolas A, et al. "Trisections of 4-manifolds with boundary." Proceedings of the National Academy of Sciences of the United States of America vol. 115,43 (2018): 10861-10868. doi: https://doi.org/10.1073/pnas.1717170115
Castro NA, Gay DT, Pinzón-Caicedo J. Trisections of 4-manifolds with boundary. Proc Natl Acad Sci U S A. 2018 Oct 23;115(43):10861-10868. doi: 10.1073/pnas.1717170115. Epub 2018 Oct 22. PMID: 30348804; PMCID: PMC6205499.
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Randomized prospective phase III trial of .

BMC cancer

Calais J, Czernin J, Fendler WP, Elashoff D, Nickols NG.
PMID: 30616601
BMC Cancer. 2019 Jan 07;19(1):18. doi: 10.1186/s12885-018-5200-1.

BACKGROUND: Salvage radiotherapy (SRT) for prostate cancer (PCa) recurrence after prostatectomy offers long-term biochemical control in about 50-60% of patients. SRT is commonly initiated in patients with serum PSA levels

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Calais J, Czernin J, Fendler WP, et al. Randomized prospective phase III trial of . BMC Cancer. 2019;19(1):18doi: 10.1186/s12885-018-5200-1.
Calais, J., Czernin, J., Fendler, W. P., Elashoff, D., & Nickols, N. G. (2019). Randomized prospective phase III trial of . BMC cancer, 19(1), 18. https://doi.org/10.1186/s12885-018-5200-1
Calais, Jeremie, et al. "Randomized prospective phase III trial of ." BMC cancer vol. 19,1 (2019): 18. doi: https://doi.org/10.1186/s12885-018-5200-1
Calais J, Czernin J, Fendler WP, Elashoff D, Nickols NG. Randomized prospective phase III trial of . BMC Cancer. 2019 Jan 07;19(1):18. doi: 10.1186/s12885-018-5200-1. PMID: 30616601; PMCID: PMC6322287.
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Nuclear spin conservation enables state-to-state control of ultracold molecular reactions.

Nature chemistry

Hu MG, Liu Y, Nichols MA, Zhu L, Quéméner G, Dulieu O, Ni KK.
PMID: 33380743
Nat Chem. 2021 May;13(5):435-440. doi: 10.1038/s41557-020-00610-0. Epub 2020 Dec 30.

Quantum-state control of reactive systems has enabled microscopic probes of underlying interaction potentials and the alteration of reaction rates using quantum statistics. However, extending such control to the quantum states of reaction outcomes remains challenging. Here, we realize this...

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Hu MG, Liu Y, Nichols MA, et al. Nuclear spin conservation enables state-to-state control of ultracold molecular reactions. Nat Chem. 2020;13(5):435-440doi: 10.1038/s41557-020-00610-0.
Hu, M. G., Liu, Y., Nichols, M. A., Zhu, L., Quéméner, G., Dulieu, O., & Ni, K. K. (2021). Nuclear spin conservation enables state-to-state control of ultracold molecular reactions. Nature chemistry, 13(5), 435-440. https://doi.org/10.1038/s41557-020-00610-0
Hu, Ming-Guang, et al. "Nuclear spin conservation enables state-to-state control of ultracold molecular reactions." Nature chemistry vol. 13,5 (2021): 435-440. doi: https://doi.org/10.1038/s41557-020-00610-0
Hu MG, Liu Y, Nichols MA, Zhu L, Quéméner G, Dulieu O, Ni KK. Nuclear spin conservation enables state-to-state control of ultracold molecular reactions. Nat Chem. 2021 May;13(5):435-440. doi: 10.1038/s41557-020-00610-0. Epub 2020 Dec 30. PMID: 33380743.
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Precision test of statistical dynamics with state-to-state ultracold chemistry.

Nature

Liu Y, Hu MG, Nichols MA, Yang D, Xie D, Guo H, Ni KK.
PMID: 34012086
Nature. 2021 May;593(7859):379-384. doi: 10.1038/s41586-021-03459-6. Epub 2021 May 19.

Chemical reactions represent a class of quantum problems that challenge both the current theoretical understanding and computational capabilities

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Liu Y, Hu MG, Nichols MA, et al. Precision test of statistical dynamics with state-to-state ultracold chemistry. Nature. 2021;593(7859):379-384doi: 10.1038/s41586-021-03459-6.
Liu, Y., Hu, M. G., Nichols, M. A., Yang, D., Xie, D., Guo, H., & Ni, K. K. (2021). Precision test of statistical dynamics with state-to-state ultracold chemistry. Nature, 593(7859), 379-384. https://doi.org/10.1038/s41586-021-03459-6
Liu, Yu, et al. "Precision test of statistical dynamics with state-to-state ultracold chemistry." Nature vol. 593,7859 (2021): 379-384. doi: https://doi.org/10.1038/s41586-021-03459-6
Liu Y, Hu MG, Nichols MA, Yang D, Xie D, Guo H, Ni KK. Precision test of statistical dynamics with state-to-state ultracold chemistry. Nature. 2021 May;593(7859):379-384. doi: 10.1038/s41586-021-03459-6. Epub 2021 May 19. PMID: 34012086.
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Exopolysaccharide anchoring creates an extreme resistance to sedimentation.

Journal of bacteriology

Kessler NG, Caraballo Delgado DM, Shah NK, Dickinson JA, Moore SD.
PMID: 33753470
J Bacteriol. 2021 Mar 22; doi: 10.1128/JB.00023-21. Epub 2021 Mar 22.

By evolving strains of

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Kessler NG, Caraballo Delgado DM, Shah NK, et al. Exopolysaccharide anchoring creates an extreme resistance to sedimentation. J Bacteriol. 2021;doi: 10.1128/JB.00023-21.
Kessler, N. G., Caraballo Delgado, D. M., Shah, N. K., Dickinson, J. A., & Moore, S. D. (2021). Exopolysaccharide anchoring creates an extreme resistance to sedimentation. Journal of bacteriology, . https://doi.org/10.1128/JB.00023-21
Kessler, Nickolas G, et al. "Exopolysaccharide anchoring creates an extreme resistance to sedimentation." Journal of bacteriology vol. (2021). doi: https://doi.org/10.1128/JB.00023-21
Kessler NG, Caraballo Delgado DM, Shah NK, Dickinson JA, Moore SD. Exopolysaccharide anchoring creates an extreme resistance to sedimentation. J Bacteriol. 2021 Mar 22; doi: 10.1128/JB.00023-21. Epub 2021 Mar 22. PMID: 33753470; PMCID: PMC8117528.
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Classifying muscle parameters with artificial neural networks and simulated lateral pinch data.

PloS one

Kearney KM, Harley JB, Nichols JA.
PMID: 34473706
PLoS One. 2021 Sep 02;16(9):e0255103. doi: 10.1371/journal.pone.0255103. eCollection 2021.

OBJECTIVE: Hill-type muscle models are widely employed in simulations of human movement. Yet, the parameters underlying these models are difficult or impossible to measure in vivo. Prior studies demonstrate that Hill-type muscle parameters are encoded within dynamometric data. But,...

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Kearney KM, Harley JB, Nichols JA. Classifying muscle parameters with artificial neural networks and simulated lateral pinch data. PLoS One. 2021;16(9):e0255103doi: 10.1371/journal.pone.0255103.
Kearney, K. M., Harley, J. B., & Nichols, J. A. (2021). Classifying muscle parameters with artificial neural networks and simulated lateral pinch data. PloS one, 16(9), e0255103. https://doi.org/10.1371/journal.pone.0255103
Kearney, Kalyn M, et al. "Classifying muscle parameters with artificial neural networks and simulated lateral pinch data." PloS one vol. 16,9 (2021): e0255103. doi: https://doi.org/10.1371/journal.pone.0255103
Kearney KM, Harley JB, Nichols JA. Classifying muscle parameters with artificial neural networks and simulated lateral pinch data. PLoS One. 2021 Sep 02;16(9):e0255103. doi: 10.1371/journal.pone.0255103. eCollection 2021. PMID: 34473706; PMCID: PMC8412284.
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Toxicity After Stereotactic Body Radiation Therapy for Prostate Cancer in Patients With Inflammatory Bowel Disease: A Multi-institutional Matched Case-Control Series.

Advances in radiation oncology

Juarez JE, Romero T, Mantz CA, Pepin A, Aghdam N, Suy S, Steinberg ML, Levin-Epstein RG, Nickols NG, Kaplan ID, Meier RM, Pham HT, Linson PW, Hong RL, Buyyounouski MK, Bagshaw HP, Fuller DB, Katz AJ, Loblaw A, Collins SP, Kishan AU.
PMID: 34585025
Adv Radiat Oncol. 2021 Aug 28;6(6):100759. doi: 10.1016/j.adro.2021.100759. eCollection 2021.

PURPOSE: To evaluate the safety of stereotactic body radiation therapy (SBRT) for prostate cancer in men with inflammatory bowel disease (IBD).METHODS AND MATERIALS: We queried a consortium database for patients with IBD receiving SBRT for prostate cancer between 2006...

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Juarez JE, Romero T, Mantz CA, et al. Toxicity After Stereotactic Body Radiation Therapy for Prostate Cancer in Patients With Inflammatory Bowel Disease: A Multi-institutional Matched Case-Control Series. Adv Radiat Oncol. 2021;6(6):100759doi: 10.1016/j.adro.2021.100759.
Juarez, J. E., Romero, T., Mantz, C. A., Pepin, A., Aghdam, N., Suy, S., Steinberg, M. L., Levin-Epstein, R. G., Nickols, N. G., Kaplan, I. D., Meier, R. M., Pham, H. T., Linson, P. W., Hong, R. L., Buyyounouski, M. K., Bagshaw, H. P., Fuller, D. B., Katz, A. J., Loblaw, A., Collins, S. P., & Kishan, A. U. (2021). Toxicity After Stereotactic Body Radiation Therapy for Prostate Cancer in Patients With Inflammatory Bowel Disease: A Multi-institutional Matched Case-Control Series. Advances in radiation oncology, 6(6), 100759. https://doi.org/10.1016/j.adro.2021.100759
Juarez, Jesus E, et al. "Toxicity After Stereotactic Body Radiation Therapy for Prostate Cancer in Patients With Inflammatory Bowel Disease: A Multi-institutional Matched Case-Control Series." Advances in radiation oncology vol. 6,6 (2021): 100759. doi: https://doi.org/10.1016/j.adro.2021.100759
Juarez JE, Romero T, Mantz CA, Pepin A, Aghdam N, Suy S, Steinberg ML, Levin-Epstein RG, Nickols NG, Kaplan ID, Meier RM, Pham HT, Linson PW, Hong RL, Buyyounouski MK, Bagshaw HP, Fuller DB, Katz AJ, Loblaw A, Collins SP, Kishan AU. Toxicity After Stereotactic Body Radiation Therapy for Prostate Cancer in Patients With Inflammatory Bowel Disease: A Multi-institutional Matched Case-Control Series. Adv Radiat Oncol. 2021 Aug 28;6(6):100759. doi: 10.1016/j.adro.2021.100759. eCollection 2021. PMID: 34585025; PMCID: PMC8453194.
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Podiatry Resident Wellness: A Group Survey Study.

Journal of the American Podiatric Medical Association

DeHeer PA, Wolfe W, Nichols JA, Badell BJ.
PMID: 33950238
J Am Podiatr Med Assoc. 2021 May 04; doi: 10.7547/21-005. Epub 2021 May 04.

BACKGROUND: Burnout and medical resident well-being has become an increasingly studied topic in medical degree (MD) and doctor of osteopathic medicine (DO) fields and specialties which has led to systemic changes in postgraduate education and training. Although an important...

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DeHeer PA, Wolfe W, Nichols JA, et al. Podiatry Resident Wellness: A Group Survey Study. J Am Podiatr Med Assoc. 2021;doi: 10.7547/21-005.
DeHeer, P. A., Wolfe, W., Nichols, J. A., & Badell, B. J. (2021). Podiatry Resident Wellness: A Group Survey Study. Journal of the American Podiatric Medical Association, . https://doi.org/10.7547/21-005
DeHeer, Patrick A, et al. "Podiatry Resident Wellness: A Group Survey Study." Journal of the American Podiatric Medical Association vol. (2021). doi: https://doi.org/10.7547/21-005
DeHeer PA, Wolfe W, Nichols JA, Badell BJ. Podiatry Resident Wellness: A Group Survey Study. J Am Podiatr Med Assoc. 2021 May 04; doi: 10.7547/21-005. Epub 2021 May 04. PMID: 33950238.
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Showing 169 to 180 of 184 entries