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The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.

Patterns (New York, N.Y.)

Arnaud E, Laporte MA, Kim S, Aubert C, Leonelli S, Miro B, Cooper L, Jaiswal P, Kruseman G, Shrestha R, Buttigieg PL, Mungall CJ, Pietragalla J, Agbona A, Muliro J, Detras J, Hualla V, Rathore A, Das RR, Dieng I, Bauchet G, Menda N, Pommier C, Shaw F, Lyon D, Mwanzia L, Juarez H, Bonaiuti E, Chiputwa B, Obileye O, Auzoux S, Yeumo ED, Mueller LA, Silverstein K, Lafargue A, Antezana E, Devare M, King B.
PMID: 33205138
Patterns (N Y). 2020 Sep 25;1(7):100105. doi: 10.1016/j.patter.2020.100105. eCollection 2020 Oct 09.

Heterogeneous and multidisciplinary data generated by research on sustainable global agriculture and agrifood systems requires quality data labeling or annotation in order to be interoperable. As recommended by the FAIR principles, data, labels, and metadata must use controlled vocabularies...

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Arnaud E, Laporte MA, Kim S, et al. The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems. Patterns (N Y). 2020;1(7):100105doi: 10.1016/j.patter.2020.100105.
Arnaud, E., Laporte, M. A., Kim, S., Aubert, C., Leonelli, S., Miro, B., Cooper, L., Jaiswal, P., Kruseman, G., Shrestha, R., Buttigieg, P. L., Mungall, C. J., Pietragalla, J., Agbona, A., Muliro, J., Detras, J., Hualla, V., Rathore, A., Das, R. R., Dieng, I., Bauchet, G., Menda, N., Pommier, C., Shaw, F., Lyon, D., Mwanzia, L., Juarez, H., Bonaiuti, E., Chiputwa, B., Obileye, O., Auzoux, S., Yeumo, E. D., Mueller, L. A., Silverstein, K., Lafargue, A., Antezana, E., Devare, M., & King, B. (2020). The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems. Patterns (New York, N.Y.), 1(7), 100105. https://doi.org/10.1016/j.patter.2020.100105
Arnaud, Elizabeth, et al. "The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems." Patterns (New York, N.Y.) vol. 1,7 (2020): 100105. doi: https://doi.org/10.1016/j.patter.2020.100105
Arnaud E, Laporte MA, Kim S, Aubert C, Leonelli S, Miro B, Cooper L, Jaiswal P, Kruseman G, Shrestha R, Buttigieg PL, Mungall CJ, Pietragalla J, Agbona A, Muliro J, Detras J, Hualla V, Rathore A, Das RR, Dieng I, Bauchet G, Menda N, Pommier C, Shaw F, Lyon D, Mwanzia L, Juarez H, Bonaiuti E, Chiputwa B, Obileye O, Auzoux S, Yeumo ED, Mueller LA, Silverstein K, Lafargue A, Antezana E, Devare M, King B. The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems. Patterns (N Y). 2020 Sep 25;1(7):100105. doi: 10.1016/j.patter.2020.100105. eCollection 2020 Oct 09. PMID: 33205138; PMCID: PMC7660444.
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A systematic review of food loss and waste in China: Quantity, impacts and mediators.

Journal of environmental management

Li C, Bremer P, Harder MK, Lee MS, Parker K, Gaugler EC, Mirosa M.
PMID: 34836675
J Environ Manage. 2022 Feb 01;303:114092. doi: 10.1016/j.jenvman.2021.114092. Epub 2021 Nov 24.

Although food loss and waste (FL&W) is high on China's national policy agenda, there is still little scientific information published about how much FL&W exists in China, what its impacts are, and what needs to be done to reduce...

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Li C, Bremer P, Harder MK, et al. A systematic review of food loss and waste in China: Quantity, impacts and mediators. J Environ Manage. 2021;303:114092doi: 10.1016/j.jenvman.2021.114092.
Li, C., Bremer, P., Harder, M. K., Lee, M. S., Parker, K., Gaugler, E. C., & Mirosa, M. (2022). A systematic review of food loss and waste in China: Quantity, impacts and mediators. Journal of environmental management, 303114092. https://doi.org/10.1016/j.jenvman.2021.114092
Li, Charlene, et al. "A systematic review of food loss and waste in China: Quantity, impacts and mediators." Journal of environmental management vol. 303 (2022): 114092. doi: https://doi.org/10.1016/j.jenvman.2021.114092
Li C, Bremer P, Harder MK, Lee MS, Parker K, Gaugler EC, Mirosa M. A systematic review of food loss and waste in China: Quantity, impacts and mediators. J Environ Manage. 2022 Feb 01;303:114092. doi: 10.1016/j.jenvman.2021.114092. Epub 2021 Nov 24. PMID: 34836675.
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Overview of the anatomical basis of the piriformis syndrome-dissection with magnetic resonance correlation.

Experimental and therapeutic medicine

Goidescu OC, Enyedi M, Tulin AD, Tulin R, Vacaroiu IA, Nica AE, Dragos D, Ionescu D, Georgescu D, Miron A, Filipoiu FM.
PMID: 34970336
Exp Ther Med. 2022 Feb;23(2):113. doi: 10.3892/etm.2021.11036. Epub 2021 Dec 03.

The piriformis syndrome is one of the most commonly misdiagnosed causes of lower back and gluteal pain caused by the compression of the sciatic nerve and the internal pudendal neurovascular bundle by the piriformis muscle. Although this syndrome was...

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Goidescu OC, Enyedi M, Tulin AD, et al. Overview of the anatomical basis of the piriformis syndrome-dissection with magnetic resonance correlation. Exp Ther Med. 2021;23(2):113doi: 10.3892/etm.2021.11036.
Goidescu, O. C., Enyedi, M., Tulin, A. D., Tulin, R., Vacaroiu, I. A., Nica, A. E., Dragos, D., Ionescu, D., Georgescu, D., Miron, A., & Filipoiu, F. M. (2022). Overview of the anatomical basis of the piriformis syndrome-dissection with magnetic resonance correlation. Experimental and therapeutic medicine, 23(2), 113. https://doi.org/10.3892/etm.2021.11036
Goidescu, Ofelia-Costina, et al. "Overview of the anatomical basis of the piriformis syndrome-dissection with magnetic resonance correlation." Experimental and therapeutic medicine vol. 23,2 (2022): 113. doi: https://doi.org/10.3892/etm.2021.11036
Goidescu OC, Enyedi M, Tulin AD, Tulin R, Vacaroiu IA, Nica AE, Dragos D, Ionescu D, Georgescu D, Miron A, Filipoiu FM. Overview of the anatomical basis of the piriformis syndrome-dissection with magnetic resonance correlation. Exp Ther Med. 2022 Feb;23(2):113. doi: 10.3892/etm.2021.11036. Epub 2021 Dec 03. PMID: 34970336; PMCID: PMC8713160.
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Cognitive, social, and behavioral manifestations of the co-occurrence of autism spectrum disorder and attention-deficit/hyperactivity disorder: A systematic review.

Autism : the international journal of research and practice

Rosello R, Martinez-Raga J, Mira A, Pastor JC, Solmi M, Cortese S.
PMID: 34961363
Autism. 2021 Dec 28;13623613211065545. doi: 10.1177/13623613211065545. Epub 2021 Dec 28.

LAY ABSTRACT: This work aimed to review recent research on the characteristics of individuals who have both autism spectrum disorder and attention-deficit/hyperactivity disorder due to their high co-occurrence. Thirty-four studies were analyzed and main findings summarized in two content...

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Rosello R, Martinez-Raga J, Mira A, et al. Cognitive, social, and behavioral manifestations of the co-occurrence of autism spectrum disorder and attention-deficit/hyperactivity disorder: A systematic review. Autism. 2021;13623613211065545doi: 10.1177/13623613211065545.
Rosello, R., Martinez-Raga, J., Mira, A., Pastor, J. C., Solmi, M., & Cortese, S. (2021). Cognitive, social, and behavioral manifestations of the co-occurrence of autism spectrum disorder and attention-deficit/hyperactivity disorder: A systematic review. Autism : the international journal of research and practice, 13623613211065545. https://doi.org/10.1177/13623613211065545
Rosello, Rocio, et al. "Cognitive, social, and behavioral manifestations of the co-occurrence of autism spectrum disorder and attention-deficit/hyperactivity disorder: A systematic review." Autism : the international journal of research and practice vol. (2021): 13623613211065545. doi: https://doi.org/10.1177/13623613211065545
Rosello R, Martinez-Raga J, Mira A, Pastor JC, Solmi M, Cortese S. Cognitive, social, and behavioral manifestations of the co-occurrence of autism spectrum disorder and attention-deficit/hyperactivity disorder: A systematic review. Autism. 2021 Dec 28;13623613211065545. doi: 10.1177/13623613211065545. Epub 2021 Dec 28. PMID: 34961363.
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A Giant Solitary Adrenal Plasmacytoma in a Patient with HIV: A Rare Case Report and Review of the Literature.

Case reports in urology

Chennoufi M, Boukhannous I, Mokhtari M, El Moudane A, Irzi M, Ouraghi A, Jandou I, Miry A, Barki A.
PMID: 33614176
Case Rep Urol. 2021 Feb 03;2021:6654437. doi: 10.1155/2021/6654437. eCollection 2021.

Solitary extramedullary plasmacytoma (EMP) involving the adrenal gland is an extremely rare malignancy. We report a case of a solitary adrenal plasmacytoma in an HIV-positive 50-year-old woman on antiretroviral therapy who presented with a rapidly progressing lumbar left masse....

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Chennoufi M, Boukhannous I, Mokhtari M, et al. A Giant Solitary Adrenal Plasmacytoma in a Patient with HIV: A Rare Case Report and Review of the Literature. Case Rep Urol. 2021;2021:6654437doi: 10.1155/2021/6654437.
Chennoufi, M., Boukhannous, I., Mokhtari, M., El Moudane, A., Irzi, M., Ouraghi, A., Jandou, I., Miry, A., & Barki, A. (2021). A Giant Solitary Adrenal Plasmacytoma in a Patient with HIV: A Rare Case Report and Review of the Literature. Case reports in urology, 20216654437. https://doi.org/10.1155/2021/6654437
Chennoufi, Mehdi, et al. "A Giant Solitary Adrenal Plasmacytoma in a Patient with HIV: A Rare Case Report and Review of the Literature." Case reports in urology vol. 2021 (2021): 6654437. doi: https://doi.org/10.1155/2021/6654437
Chennoufi M, Boukhannous I, Mokhtari M, El Moudane A, Irzi M, Ouraghi A, Jandou I, Miry A, Barki A. A Giant Solitary Adrenal Plasmacytoma in a Patient with HIV: A Rare Case Report and Review of the Literature. Case Rep Urol. 2021 Feb 03;2021:6654437. doi: 10.1155/2021/6654437. eCollection 2021. PMID: 33614176; PMCID: PMC7875644.
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Inflammation-dependent oxidative stress metabolites as a hallmark of amyotrophic lateral sclerosis.

Free radical biology & medicine

Xiong L, McCoy M, Komuro H, West XZ, Yakubenko V, Gao D, Dudiki T, Milo A, Chen J, Podrez EA, Trapp B, Byzova TV.
PMID: 34871763
Free Radic Biol Med. 2022 Jan;178:125-133. doi: 10.1016/j.freeradbiomed.2021.11.031. Epub 2021 Dec 03.

Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disease, with poor prognosis and no cure. Substantial evidence implicates inflammation and associated oxidative stress as a potential mechanism for ALS, especially in patients carrying the SOD1 mutation and, therefore, lacking...

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Xiong L, McCoy M, Komuro H, et al. Inflammation-dependent oxidative stress metabolites as a hallmark of amyotrophic lateral sclerosis. Free Radic Biol Med. 2021;178:125-133doi: 10.1016/j.freeradbiomed.2021.11.031.
Xiong, L., McCoy, M., Komuro, H., West, X. Z., Yakubenko, V., Gao, D., Dudiki, T., Milo, A., Chen, J., Podrez, E. A., Trapp, B., & Byzova, T. V. (2022). Inflammation-dependent oxidative stress metabolites as a hallmark of amyotrophic lateral sclerosis. Free radical biology & medicine, 178125-133. https://doi.org/10.1016/j.freeradbiomed.2021.11.031
Xiong, Luyang, et al. "Inflammation-dependent oxidative stress metabolites as a hallmark of amyotrophic lateral sclerosis." Free radical biology & medicine vol. 178 (2022): 125-133. doi: https://doi.org/10.1016/j.freeradbiomed.2021.11.031
Xiong L, McCoy M, Komuro H, West XZ, Yakubenko V, Gao D, Dudiki T, Milo A, Chen J, Podrez EA, Trapp B, Byzova TV. Inflammation-dependent oxidative stress metabolites as a hallmark of amyotrophic lateral sclerosis. Free Radic Biol Med. 2022 Jan;178:125-133. doi: 10.1016/j.freeradbiomed.2021.11.031. Epub 2021 Dec 03. PMID: 34871763.
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Effect of Solvents on Proline Modified at the Secondary Sphere: A Multivariate Exploration.

The Journal of organic chemistry

Lustosa DM, Barkai S, Domb I, Milo A.
PMID: 35019660
J Org Chem. 2022 Jan 12; doi: 10.1021/acs.joc.1c02778. Epub 2022 Jan 12.

The critical influence of solvent effects on proline-catalyzed aldol reactions has been extensively described. Herein, we apply multivariate regression strategies to probe the influence of different solvents on an aldol reaction catalyzed by proline modified at its secondary sphere...

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Lustosa DM, Barkai S, Domb I, et al. Effect of Solvents on Proline Modified at the Secondary Sphere: A Multivariate Exploration. J Org Chem. 2022;doi: 10.1021/acs.joc.1c02778.
Lustosa, D. M., Barkai, S., Domb, I., & Milo, A. (2022). Effect of Solvents on Proline Modified at the Secondary Sphere: A Multivariate Exploration. The Journal of organic chemistry, . https://doi.org/10.1021/acs.joc.1c02778
Lustosa, Danilo M, et al. "Effect of Solvents on Proline Modified at the Secondary Sphere: A Multivariate Exploration." The Journal of organic chemistry vol. (2022). doi: https://doi.org/10.1021/acs.joc.1c02778
Lustosa DM, Barkai S, Domb I, Milo A. Effect of Solvents on Proline Modified at the Secondary Sphere: A Multivariate Exploration. J Org Chem. 2022 Jan 12; doi: 10.1021/acs.joc.1c02778. Epub 2022 Jan 12. PMID: 35019660.
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Long-term Symptoms After SARS-CoV-2 Infection in Children and Adolescents.

JAMA

Radtke T, Ulyte A, Puhan MA, Kriemler S.
PMID: 34264266
JAMA. 2021 Jul 15; doi: 10.1001/jama.2021.11880. Epub 2021 Jul 15.

No abstract available.

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Radtke T, Ulyte A, Puhan MA, et al. Long-term Symptoms After SARS-CoV-2 Infection in Children and Adolescents. JAMA. 2021;doi: 10.1001/jama.2021.11880.
Radtke, T., Ulyte, A., Puhan, M. A., & Kriemler, S. (2021). Long-term Symptoms After SARS-CoV-2 Infection in Children and Adolescents. JAMA, . https://doi.org/10.1001/jama.2021.11880
Radtke, Thomas, et al. "Long-term Symptoms After SARS-CoV-2 Infection in Children and Adolescents." JAMA vol. (2021). doi: https://doi.org/10.1001/jama.2021.11880
Radtke T, Ulyte A, Puhan MA, Kriemler S. Long-term Symptoms After SARS-CoV-2 Infection in Children and Adolescents. JAMA. 2021 Jul 15; doi: 10.1001/jama.2021.11880. Epub 2021 Jul 15. PMID: 34264266; PMCID: PMC8283661.
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Response by Mital et al to Letter Regarding Article, "A Validated Model for Sudden Cardiac Death Risk Prediction in Pediatric Hypertrophic Cardiomyopathy".

Circulation

Mital S, Armstrong KR, Butts RJ, Conway J, Fan S, Gardin L, Kantor PF, Kaufman B, Lafreniere-Roula M, Miron A, Richmond ME, Rossano JW, Russell MW, Villa C, Weintraub RG.
PMID: 33720772
Circulation. 2021 Mar 16;143(11):e788-e789. doi: 10.1161/CIRCULATIONAHA.120.051632. Epub 2021 Mar 15.

No abstract available.

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Mital S, Armstrong KR, Butts RJ, et al. Response by Mital et al to Letter Regarding Article, "A Validated Model for Sudden Cardiac Death Risk Prediction in Pediatric Hypertrophic Cardiomyopathy". Circulation. 2021;143(11):e788-e789doi: 10.1161/CIRCULATIONAHA.120.051632.
Mital, S., Armstrong, K. R., Butts, R. J., Conway, J., Fan, S., Gardin, L., Kantor, P. F., Kaufman, B., Lafreniere-Roula, M., Miron, A., Richmond, M. E., Rossano, J. W., Russell, M. W., Villa, C., Weintraub, R. G. (2021). Response by Mital et al to Letter Regarding Article, "A Validated Model for Sudden Cardiac Death Risk Prediction in Pediatric Hypertrophic Cardiomyopathy". Circulation, 143(11), e788-e789. https://doi.org/10.1161/CIRCULATIONAHA.120.051632
Mital, Seema, et al. "Response by Mital et al to Letter Regarding Article, "A Validated Model for Sudden Cardiac Death Risk Prediction in Pediatric Hypertrophic Cardiomyopathy"." Circulation vol. 143,11 (2021): e788-e789. doi: https://doi.org/10.1161/CIRCULATIONAHA.120.051632
Mital S, Armstrong KR, Butts RJ, Conway J, Fan S, Gardin L, Kantor PF, Kaufman B, Lafreniere-Roula M, Miron A, Richmond ME, Rossano JW, Russell MW, Villa C, Weintraub RG. Response by Mital et al to Letter Regarding Article, "A Validated Model for Sudden Cardiac Death Risk Prediction in Pediatric Hypertrophic Cardiomyopathy". Circulation. 2021 Mar 16;143(11):e788-e789. doi: 10.1161/CIRCULATIONAHA.120.051632. Epub 2021 Mar 15. PMID: 33720772.
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Seminal plasma, and not sperm, induces time and concentration-dependent neutrophil extracellular trap release in donkeys.

Equine veterinary journal

Mateo-Otero Y, Zambrano F, Catalán J, Sánchez R, Yeste M, Miro J, Fernandez-Fuertes B.
PMID: 33908643
Equine Vet J. 2021 Apr 28; doi: 10.1111/evj.13457. Epub 2021 Apr 28.

BACKGROUND: In several mammalian species, acute endometritis driven by the recruitment of polymorphonuclear cells (PMN) occurs in response to semen. These PMNs release DNA to form neutrophil extracellular traps (NETs) in cattle, horse and human, leading to sperm entrapment....

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Mateo-Otero Y, Zambrano F, Catalán J, et al. Seminal plasma, and not sperm, induces time and concentration-dependent neutrophil extracellular trap release in donkeys. Equine Vet J. 2021;doi: 10.1111/evj.13457.
Mateo-Otero, Y., Zambrano, F., Catalán, J., Sánchez, R., Yeste, M., Miro, J., & Fernandez-Fuertes, B. (2021). Seminal plasma, and not sperm, induces time and concentration-dependent neutrophil extracellular trap release in donkeys. Equine veterinary journal, . https://doi.org/10.1111/evj.13457
Mateo-Otero, Yentel, et al. "Seminal plasma, and not sperm, induces time and concentration-dependent neutrophil extracellular trap release in donkeys." Equine veterinary journal vol. (2021). doi: https://doi.org/10.1111/evj.13457
Mateo-Otero Y, Zambrano F, Catalán J, Sánchez R, Yeste M, Miro J, Fernandez-Fuertes B. Seminal plasma, and not sperm, induces time and concentration-dependent neutrophil extracellular trap release in donkeys. Equine Vet J. 2021 Apr 28; doi: 10.1111/evj.13457. Epub 2021 Apr 28. PMID: 33908643.
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Teeth of the red fox Vulpes vulpes (L., 1758) as a bioindicator in studies on fluoride pollution.

Acta theriologica

Kalisińska E, Palczewska-Komsa M.
PMID: 21957316
Acta Theriol (Warsz). 2011 Oct;56(4):343-351. doi: 10.1007/s13364-011-0039-8. Epub 2011 Apr 21.

An examination was made of fluoride content in the mandibular first molars of the permanent teeth of the red fox Vulpes vulpes living in north-west (NW) Poland. The teeth were first dried to a constant weight at 105°C and...

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Kalisińska E, Palczewska-Komsa M. Teeth of the red fox Vulpes vulpes (L., 1758) as a bioindicator in studies on fluoride pollution. Acta Theriol (Warsz). 2011;56(4):343-351doi: 10.1007/s13364-011-0039-8.
Kalisińska, E., & Palczewska-Komsa, M. (2011). Teeth of the red fox Vulpes vulpes (L., 1758) as a bioindicator in studies on fluoride pollution. Acta theriologica, 56(4), 343-351. https://doi.org/10.1007/s13364-011-0039-8
Kalisińska, Elżbieta, and Palczewska-Komsa, Mirona. "Teeth of the red fox Vulpes vulpes (L., 1758) as a bioindicator in studies on fluoride pollution." Acta theriologica vol. 56,4 (2011): 343-351. doi: https://doi.org/10.1007/s13364-011-0039-8
Kalisińska E, Palczewska-Komsa M. Teeth of the red fox Vulpes vulpes (L., 1758) as a bioindicator in studies on fluoride pollution. Acta Theriol (Warsz). 2011 Oct;56(4):343-351. doi: 10.1007/s13364-011-0039-8. Epub 2011 Apr 21. PMID: 21957316; PMCID: PMC3171659.
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Phyto-Functionalized Silver Nanoparticles Derived from Conifer Bark Extracts and Evaluation of Their Antimicrobial and Cytogenotoxic Effects.

Molecules (Basel, Switzerland)

Macovei I, Luca SV, Skalicka-Woźniak K, Sacarescu L, Pascariu P, Ghilan A, Doroftei F, Ursu EL, Rimbu CM, Horhogea CE, Lungu C, Vochita G, Panainte AD, Nechita C, Corciova MA, Miron A.
PMID: 35011449
Molecules. 2021 Dec 30;27(1). doi: 10.3390/molecules27010217.

Silver nanoparticles synthesized using plant extracts as reducing and capping agents showed various biological activities. In the present study, colloidal silver nanoparticle solutions were produced from the aqueous extracts of

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Macovei I, Luca SV, Skalicka-Woźniak K, et al. Phyto-Functionalized Silver Nanoparticles Derived from Conifer Bark Extracts and Evaluation of Their Antimicrobial and Cytogenotoxic Effects. Molecules. 2021;27(1)doi: 10.3390/molecules27010217.
Macovei, I., Luca, S. V., Skalicka-Woźniak, K., Sacarescu, L., Pascariu, P., Ghilan, A., Doroftei, F., Ursu, E. L., Rimbu, C. M., Horhogea, C. E., Lungu, C., Vochita, G., Panainte, A. D., Nechita, C., Corciova, M. A., & Miron, A. (2021). Phyto-Functionalized Silver Nanoparticles Derived from Conifer Bark Extracts and Evaluation of Their Antimicrobial and Cytogenotoxic Effects. Molecules (Basel, Switzerland), 27(1), . https://doi.org/10.3390/molecules27010217
Macovei, Irina, et al. "Phyto-Functionalized Silver Nanoparticles Derived from Conifer Bark Extracts and Evaluation of Their Antimicrobial and Cytogenotoxic Effects." Molecules (Basel, Switzerland) vol. 27,1 (2021). doi: https://doi.org/10.3390/molecules27010217
Macovei I, Luca SV, Skalicka-Woźniak K, Sacarescu L, Pascariu P, Ghilan A, Doroftei F, Ursu EL, Rimbu CM, Horhogea CE, Lungu C, Vochita G, Panainte AD, Nechita C, Corciova MA, Miron A. Phyto-Functionalized Silver Nanoparticles Derived from Conifer Bark Extracts and Evaluation of Their Antimicrobial and Cytogenotoxic Effects. Molecules. 2021 Dec 30;27(1). doi: 10.3390/molecules27010217. PMID: 35011449; PMCID: PMC8746316.
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