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SBRML: a markup language for associating systems biology data with models.

Bioinformatics (Oxford, England)

Dada JO, Spasić I, Paton NW, Mendes P.
PMID: 20176582
Bioinformatics. 2010 Apr 01;26(7):932-8. doi: 10.1093/bioinformatics/btq069. Epub 2010 Feb 21.

MOTIVATION: Research in systems biology is carried out through a combination of experiments and models. Several data standards have been adopted for representing models (Systems Biology Markup Language) and various types of relevant experimental data (such as FuGE and...

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Dada JO, Spasić I, Paton NW, et al. SBRML: a markup language for associating systems biology data with models. Bioinformatics. 2010;26(7):932-8doi: 10.1093/bioinformatics/btq069.
Dada, J. O., Spasić, I., Paton, N. W., & Mendes, P. (2010). SBRML: a markup language for associating systems biology data with models. Bioinformatics (Oxford, England), 26(7), 932-8. https://doi.org/10.1093/bioinformatics/btq069
Dada, Joseph O, et al. "SBRML: a markup language for associating systems biology data with models." Bioinformatics (Oxford, England) vol. 26,7 (2010): 932-8. doi: https://doi.org/10.1093/bioinformatics/btq069
Dada JO, Spasić I, Paton NW, Mendes P. SBRML: a markup language for associating systems biology data with models. Bioinformatics. 2010 Apr 01;26(7):932-8. doi: 10.1093/bioinformatics/btq069. Epub 2010 Feb 21. PMID: 20176582.
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Use of SSRIs may Impact Bone Density in Adolescent and Young Women with Anorexia Nervosa.

CNS spectrums

Misra M, Le Clair M, Mendes N, Miller KK, Lawson E, Meenaghan E, Weigel T, Ebrahimi S, Herzog DB, Klibanski A.
PMID: 24790401
CNS Spectr. 2010 Sep;15(9):579-586. doi: 10.1017/s1092852900000559.

OBJECTIVES: Alterations in serotonin impact bone metabolism in animal models, and selective serotonin reuptake inhibitors (SSRI) have been associated with increased fracture risk in older adults. SSRIs are commonly used in anorexia nervosa (AN), a condition that predisposes to...

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Misra M, Le Clair M, Mendes N, et al. Use of SSRIs may Impact Bone Density in Adolescent and Young Women with Anorexia Nervosa. CNS Spectr. 2010;15(9):579-586doi: 10.1017/s1092852900000559.
Misra, M., Le Clair, M., Mendes, N., Miller, K. K., Lawson, E., Meenaghan, E., Weigel, T., Ebrahimi, S., Herzog, D. B., & Klibanski, A. (2010). Use of SSRIs may Impact Bone Density in Adolescent and Young Women with Anorexia Nervosa. CNS spectrums, 15(9), 579-586. https://doi.org/10.1017/s1092852900000559
Misra, Madhusmita, et al. "Use of SSRIs may Impact Bone Density in Adolescent and Young Women with Anorexia Nervosa." CNS spectrums vol. 15,9 (2010): 579-586. doi: https://doi.org/10.1017/s1092852900000559
Misra M, Le Clair M, Mendes N, Miller KK, Lawson E, Meenaghan E, Weigel T, Ebrahimi S, Herzog DB, Klibanski A. Use of SSRIs may Impact Bone Density in Adolescent and Young Women with Anorexia Nervosa. CNS Spectr. 2010 Sep;15(9):579-586. doi: 10.1017/s1092852900000559. PMID: 24790401; PMCID: PMC4001118.
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Response to Drs. Safer and Safer.

Journal of the American Geriatrics Society

Sousa N, Mendes R, Oliveira J.
PMID: 24628645
J Am Geriatr Soc. 2014 Mar;62(3):590-1. doi: 10.1111/jgs.12712.

No abstract available.

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Sousa N, Mendes R, Oliveira J. Response to Drs. Safer and Safer. J Am Geriatr Soc. 2014;62(3):590-1doi: 10.1111/jgs.12712.
Sousa, N., Mendes, R., & Oliveira, J. (2014). Response to Drs. Safer and Safer. Journal of the American Geriatrics Society, 62(3), 590-1. https://doi.org/10.1111/jgs.12712
Sousa, Nelson, et al. "Response to Drs. Safer and Safer." Journal of the American Geriatrics Society vol. 62,3 (2014): 590-1. doi: https://doi.org/10.1111/jgs.12712
Sousa N, Mendes R, Oliveira J. Response to Drs. Safer and Safer. J Am Geriatr Soc. 2014 Mar;62(3):590-1. doi: 10.1111/jgs.12712. PMID: 24628645.
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Influence of the rest pulse duration in pulsed electrodeposition of Fe nanowires.

Journal of nanoscience and nanotechnology

Azevedo J, Sousa CT, Mendes A, Araújo JP.
PMID: 23447964
J Nanosci Nanotechnol. 2012 Dec;12(12):9112-7. doi: 10.1166/jnn.2012.6769.

Highly uniform iron nanowires were synthesized in porous anodic alumina, through a pulsed electrodeposition method. The effect of the rest pulse duration in the deposition quality was systematically investigated, being the best duration found at 0.6 s with 91.9%...

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Azevedo J, Sousa CT, Mendes A, et al. Influence of the rest pulse duration in pulsed electrodeposition of Fe nanowires. J Nanosci Nanotechnol. 2012;12(12):9112-7doi: 10.1166/jnn.2012.6769.
Azevedo, J., Sousa, C. T., Mendes, A., & Araújo, J. P. (2012). Influence of the rest pulse duration in pulsed electrodeposition of Fe nanowires. Journal of nanoscience and nanotechnology, 12(12), 9112-7. https://doi.org/10.1166/jnn.2012.6769
Azevedo, J, et al. "Influence of the rest pulse duration in pulsed electrodeposition of Fe nanowires." Journal of nanoscience and nanotechnology vol. 12,12 (2012): 9112-7. doi: https://doi.org/10.1166/jnn.2012.6769
Azevedo J, Sousa CT, Mendes A, Araújo JP. Influence of the rest pulse duration in pulsed electrodeposition of Fe nanowires. J Nanosci Nanotechnol. 2012 Dec;12(12):9112-7. doi: 10.1166/jnn.2012.6769. PMID: 23447964.
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Red blood cell transfusion in the intensive care setting: controversies amongst evidence.

Revista Brasileira de terapia intensiva

Costa Filho RC, Gutierrez F, Fernandes H, Mendes C, Lobo S.
PMID: 25303555
Rev Bras Ter Intensiva. 2009 Aug;21(3):315-23.

Anemia is a prevalent issue in intensive care units. It appears in the first days, and may continue or worsen during hospital stay. Its etiology is generally multifactorial. Red blood cell transfusion is the most common intervention for treating...

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Costa Filho RC, Gutierrez F, Fernandes H, et al. Transfusão de hemácias em terapia intensiva: controvérsias entre evidências. Red blood cell transfusion in the intensive care setting: controversies amongst evidence. Rev Bras Ter Intensiva. 2009;21(3):315-23
Costa Filho, R. C., Gutierrez, F., Fernandes, H., Mendes, C., & Lobo, S. (2009). Transfusão de hemácias em terapia intensiva: controvérsias entre evidências. Red blood cell transfusion in the intensive care setting: controversies amongst evidence. Revista Brasileira de terapia intensiva, 21(3), 315-23.
Costa Filho, Rubens Carmo, et al. "Transfusão de hemácias em terapia intensiva: controvérsias entre evidências." Red blood cell transfusion in the intensive care setting: controversies amongst evidence. Revista Brasileira de terapia intensiva vol. 21,3 (2009): 315-23.
Costa Filho RC, Gutierrez F, Fernandes H, Mendes C, Lobo S. Transfusão de hemácias em terapia intensiva: controvérsias entre evidências. Red blood cell transfusion in the intensive care setting: controversies amongst evidence. Rev Bras Ter Intensiva. 2009 Aug;21(3):315-23. Portuguese. PMID: 25303555.
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Mating type loci inFusarium: structure and function.

Mycotoxin research

Waalwijk C, Keszthelyi A, van der Lee T, Jeney A, de Vries I, Kerenyi Z, Mendes O, Hornok L.
PMID: 23605502
Mycotoxin Res. 2006 Mar;22(1):54-60. doi: 10.1007/BF02954558.

Sex in fungi is regulated by highly dissimilar mating type loci named idiomorphs. The genus Fusarium harbours both sexual as well as esexual species and each appears to contain one or the other idiomorph. The structure of these loci...

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Waalwijk C, Keszthelyi A, van der Lee T, et al. Mating type loci inFusarium: structure and function. Mycotoxin Res. 2006;22(1):54-60doi: 10.1007/BF02954558.
Waalwijk, C., Keszthelyi, A., van der Lee, T., Jeney, A., de Vries, I., Kerenyi, Z., Mendes, O., & Hornok, L. (2006). Mating type loci inFusarium: structure and function. Mycotoxin research, 22(1), 54-60. https://doi.org/10.1007/BF02954558
Waalwijk, C, et al. "Mating type loci inFusarium: structure and function." Mycotoxin research vol. 22,1 (2006): 54-60. doi: https://doi.org/10.1007/BF02954558
Waalwijk C, Keszthelyi A, van der Lee T, Jeney A, de Vries I, Kerenyi Z, Mendes O, Hornok L. Mating type loci inFusarium: structure and function. Mycotoxin Res. 2006 Mar;22(1):54-60. doi: 10.1007/BF02954558. PMID: 23605502.
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Catalytic control over supramolecular gel formation.

Nature chemistry

Boekhoven J, Poolman JM, Maity C, Li F, van der Mee L, Minkenberg CB, Mendes E, van Esch JH, Eelkema R.
PMID: 23609096
Nat Chem. 2013 May;5(5):433-7. doi: 10.1038/nchem.1617. Epub 2013 Apr 07.

Low-molecular-weight gels show great potential for application in fields ranging from the petrochemical industry to healthcare and tissue engineering. These supramolecular gels are often metastable materials, which implies that their properties are, at least partially, kinetically controlled. Here we...

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Boekhoven J, Poolman JM, Maity C, et al. Catalytic control over supramolecular gel formation. Nat Chem. 2013;5(5):433-7doi: 10.1038/nchem.1617.
Boekhoven, J., Poolman, J. M., Maity, C., Li, F., van der Mee, L., Minkenberg, C. B., Mendes, E., van Esch, J. H., & Eelkema, R. (2013). Catalytic control over supramolecular gel formation. Nature chemistry, 5(5), 433-7. https://doi.org/10.1038/nchem.1617
Boekhoven, Job, et al. "Catalytic control over supramolecular gel formation." Nature chemistry vol. 5,5 (2013): 433-7. doi: https://doi.org/10.1038/nchem.1617
Boekhoven J, Poolman JM, Maity C, Li F, van der Mee L, Minkenberg CB, Mendes E, van Esch JH, Eelkema R. Catalytic control over supramolecular gel formation. Nat Chem. 2013 May;5(5):433-7. doi: 10.1038/nchem.1617. Epub 2013 Apr 07. PMID: 23609096.
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Effect of Phenolic Compounds on the Synthesis of Gold Nanoparticles and its Catalytic Activity in the Reduction of Nitro Compounds.

Nanomaterials (Basel, Switzerland)

Alegria ECBA, Ribeiro APC, Mendes M, Ferraria AM, do Rego AMB, Pombeiro AJL.
PMID: 29748502
Nanomaterials (Basel). 2018 May 10;8(5). doi: 10.3390/nano8050320.

Gold nanoparticles (AuNPs) were prepared using an eco-friendly approach in a single step by reduction of HAuCl₄ with polyphenols from tea extracts, which act as both reducing and capping agents. The obtained AuNPs were characterized by scanning electron microscopy...

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Alegria ECBA, Ribeiro APC, Mendes M, et al. Effect of Phenolic Compounds on the Synthesis of Gold Nanoparticles and its Catalytic Activity in the Reduction of Nitro Compounds. Nanomaterials (Basel). 2018;8(5)doi: 10.3390/nano8050320.
Alegria, E. C. B. A., Ribeiro, A. P. C., Mendes, M., Ferraria, A. M., do Rego, A. M. B., & Pombeiro, A. J. L. (2018). Effect of Phenolic Compounds on the Synthesis of Gold Nanoparticles and its Catalytic Activity in the Reduction of Nitro Compounds. Nanomaterials (Basel, Switzerland), 8(5), . https://doi.org/10.3390/nano8050320
Alegria, Elisabete C B A, et al. "Effect of Phenolic Compounds on the Synthesis of Gold Nanoparticles and its Catalytic Activity in the Reduction of Nitro Compounds." Nanomaterials (Basel, Switzerland) vol. 8,5 (2018). doi: https://doi.org/10.3390/nano8050320
Alegria ECBA, Ribeiro APC, Mendes M, Ferraria AM, do Rego AMB, Pombeiro AJL. Effect of Phenolic Compounds on the Synthesis of Gold Nanoparticles and its Catalytic Activity in the Reduction of Nitro Compounds. Nanomaterials (Basel). 2018 May 10;8(5). doi: 10.3390/nano8050320. PMID: 29748502; PMCID: PMC5977334.
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Portal Hypertensive Biliopathy: An Infrequent Cause of Biliary Obstruction.

GE Portuguese journal of gastroenterology

Cardoso R, Casela A, Lopes S, Agostinho C, Souto P, Camacho E, Almeida N, Mendes S, Gomes D, Sofia C.
PMID: 28868376
GE Port J Gastroenterol. 2015 Mar 18;22(2):65-69. doi: 10.1016/j.jpge.2015.01.003. eCollection 2015.

INTRODUCTION: Biliary obstruction is usually caused by choledocholithiasis. However, in some circumstances, alternative or concurring unusual ethiologies such as portal hypertensive biliopathy (PHB) must be considered.CLINICAL CASE: We present the case of a 36-year-old female complaining of jaundice and...

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Cardoso R, Casela A, Lopes S, et al. Portal Hypertensive Biliopathy: An Infrequent Cause of Biliary Obstruction. GE Port J Gastroenterol. 2015;22(2):65-69doi: 10.1016/j.jpge.2015.01.003.
Cardoso, R., Casela, A., Lopes, S., Agostinho, C., Souto, P., Camacho, E., Almeida, N., Mendes, S., Gomes, D., & Sofia, C. (2015). Portal Hypertensive Biliopathy: An Infrequent Cause of Biliary Obstruction. GE Portuguese journal of gastroenterology, 22(2), 65-69. https://doi.org/10.1016/j.jpge.2015.01.003
Cardoso, Ricardo, et al. "Portal Hypertensive Biliopathy: An Infrequent Cause of Biliary Obstruction." GE Portuguese journal of gastroenterology vol. 22,2 (2015): 65-69. doi: https://doi.org/10.1016/j.jpge.2015.01.003
Cardoso R, Casela A, Lopes S, Agostinho C, Souto P, Camacho E, Almeida N, Mendes S, Gomes D, Sofia C. Portal Hypertensive Biliopathy: An Infrequent Cause of Biliary Obstruction. GE Port J Gastroenterol. 2015 Mar 18;22(2):65-69. doi: 10.1016/j.jpge.2015.01.003. eCollection 2015. PMID: 28868376; PMCID: PMC5579995.
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Refractory Celiac Disease Type II: A Case Report that Demonstrates the Diagnostic and Therapeutic Challenges.

GE Portuguese journal of gastroenterology

Fernandes A, Ferreira AM, Ferreira R, Mendes S, Agostinho C, Almeida N, Figueiredo P, Ferreira M, Amaro P, Castro LPE, Sofia C.
PMID: 28868442
GE Port J Gastroenterol. 2015 Sep 26;23(2):106-112. doi: 10.1016/j.jpge.2015.08.001. eCollection 2016.

Refractory celiac disease is an uncommon but serious complication of celiac disease. We describe a case of a severe refractory celiac disease type II, complicated with ulcerative jejunoileitis, in a 68 years old female, unresponsive to consecutive treatments with...

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Fernandes A, Ferreira AM, Ferreira R, et al. Refractory Celiac Disease Type II: A Case Report that Demonstrates the Diagnostic and Therapeutic Challenges. GE Port J Gastroenterol. 2015;23(2):106-112doi: 10.1016/j.jpge.2015.08.001.
Fernandes, A., Ferreira, A. M., Ferreira, R., Mendes, S., Agostinho, C., Almeida, N., Figueiredo, P., Ferreira, M., Amaro, P., Castro, L. P. E., & Sofia, C. (2016). Refractory Celiac Disease Type II: A Case Report that Demonstrates the Diagnostic and Therapeutic Challenges. GE Portuguese journal of gastroenterology, 23(2), 106-112. https://doi.org/10.1016/j.jpge.2015.08.001
Fernandes, Alexandra, et al. "Refractory Celiac Disease Type II: A Case Report that Demonstrates the Diagnostic and Therapeutic Challenges." GE Portuguese journal of gastroenterology vol. 23,2 (2016): 106-112. doi: https://doi.org/10.1016/j.jpge.2015.08.001
Fernandes A, Ferreira AM, Ferreira R, Mendes S, Agostinho C, Almeida N, Figueiredo P, Ferreira M, Amaro P, Castro LPE, Sofia C. Refractory Celiac Disease Type II: A Case Report that Demonstrates the Diagnostic and Therapeutic Challenges. GE Port J Gastroenterol. 2015 Sep 26;23(2):106-112. doi: 10.1016/j.jpge.2015.08.001. eCollection 2016. PMID: 28868442; PMCID: PMC5580141.
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Metadynamics with Discriminants: A Tool for Understanding Chemistry.

Journal of chemical theory and computation

Piccini G, Mendels D, Parrinello M.
PMID: 30222350
J Chem Theory Comput. 2018 Oct 09;14(10):5040-5044. doi: 10.1021/acs.jctc.8b00634. Epub 2018 Sep 26.

We introduce an extension of a recently published method [ Mendels et al. J. Phys. Chem. Lett. 2018 , 9 , 2776 - 2781 ] to obtain low-dimensional collective variables for studying multiple states free energy processes in chemical...

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Piccini G, Mendels D, Parrinello M. Metadynamics with Discriminants: A Tool for Understanding Chemistry. J Chem Theory Comput. 2018;14(10):5040-5044doi: 10.1021/acs.jctc.8b00634.
Piccini, G., Mendels, D., & Parrinello, M. (2018). Metadynamics with Discriminants: A Tool for Understanding Chemistry. Journal of chemical theory and computation, 14(10), 5040-5044. https://doi.org/10.1021/acs.jctc.8b00634
Piccini, GiovanniMaria, et al. "Metadynamics with Discriminants: A Tool for Understanding Chemistry." Journal of chemical theory and computation vol. 14,10 (2018): 5040-5044. doi: https://doi.org/10.1021/acs.jctc.8b00634
Piccini G, Mendels D, Parrinello M. Metadynamics with Discriminants: A Tool for Understanding Chemistry. J Chem Theory Comput. 2018 Oct 09;14(10):5040-5044. doi: 10.1021/acs.jctc.8b00634. Epub 2018 Sep 26. PMID: 30222350.
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WITHDRAWN: Interrelation of periodontal parameters between asthmatics and nonasthmatics subjects: a systematic review and meta-analysis.

Journal of dentistry

Mendes V, Dos Santos GO, Moraschini V.
PMID: 29203147
J Dent. 2018 Feb;69:32-40. doi: 10.1016/j.jdent.2017.11.011. Epub 2017 Dec 05.

The Publisher regrets that this article is a duplication of an article that has already been published in the Journal of Periodontology, 89 (2018) 440-455, doi:10.1902/jop.2017.170363. The duplicate article has therefore been withdrawn. The full Elsevier Policy on Article...

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Mendes V, Dos Santos GO, Moraschini V. WITHDRAWN: Interrelation of periodontal parameters between asthmatics and nonasthmatics subjects: a systematic review and meta-analysis. J Dent. 2017;69:32-40doi: 10.1016/j.jdent.2017.11.011.
Mendes, V., Dos Santos, G. O., & Moraschini, V. (2018). WITHDRAWN: Interrelation of periodontal parameters between asthmatics and nonasthmatics subjects: a systematic review and meta-analysis. Journal of dentistry, 6932-40. https://doi.org/10.1016/j.jdent.2017.11.011
Mendes, Vivian, et al. "WITHDRAWN: Interrelation of periodontal parameters between asthmatics and nonasthmatics subjects: a systematic review and meta-analysis." Journal of dentistry vol. 69 (2018): 32-40. doi: https://doi.org/10.1016/j.jdent.2017.11.011
Mendes V, Dos Santos GO, Moraschini V. WITHDRAWN: Interrelation of periodontal parameters between asthmatics and nonasthmatics subjects: a systematic review and meta-analysis. J Dent. 2018 Feb;69:32-40. doi: 10.1016/j.jdent.2017.11.011. Epub 2017 Dec 05. PMID: 29203147.
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Showing 37 to 48 of 773 entries