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Correction: Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole.

PLoS pathogens

Fougère A, Jackson AP, Bechtsi DP, Braks JA, Annoura T, Fonager J, Spaccapelo R, Ramesar J, Chevalley-Maurel S, Klop O, van der Laan AM, Tanke HJ, Kocken CH, Pasini EM, Khan SM, Böhme U, van Ooij C, Otto TD, Janse CJ, Franke-Fayard B.
PMID: 28095481
PLoS Pathog. 2017 Jan 17;13(1):e1006128. doi: 10.1371/journal.ppat.1006128. eCollection 2017 Jan.

[This corrects the article DOI: 10.1371/journal.ppat.1005917.].

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Fougère A, Jackson AP, Bechtsi DP, et al. Correction: Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole. PLoS Pathog. 2017;13(1):e1006128doi: 10.1371/journal.ppat.1006128.
Fougère, A., Jackson, A. P., Bechtsi, D. P., Braks, J. A., Annoura, T., Fonager, J., Spaccapelo, R., Ramesar, J., Chevalley-Maurel, S., Klop, O., van der Laan, A. M., Tanke, H. J., Kocken, C. H., Pasini, E. M., Khan, S. M., Böhme, U., van Ooij, C., Otto, T. D., Janse, C. J., & Franke-Fayard, B. (2017). Correction: Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole. PLoS pathogens, 13(1), e1006128. https://doi.org/10.1371/journal.ppat.1006128
Fougère, Aurélie, et al. "Correction: Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole." PLoS pathogens vol. 13,1 (2017): e1006128. doi: https://doi.org/10.1371/journal.ppat.1006128
Fougère A, Jackson AP, Bechtsi DP, Braks JA, Annoura T, Fonager J, Spaccapelo R, Ramesar J, Chevalley-Maurel S, Klop O, van der Laan AM, Tanke HJ, Kocken CH, Pasini EM, Khan SM, Böhme U, van Ooij C, Otto TD, Janse CJ, Franke-Fayard B. Correction: Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole. PLoS Pathog. 2017 Jan 17;13(1):e1006128. doi: 10.1371/journal.ppat.1006128. eCollection 2017 Jan. PMID: 28095481; PMCID: PMC5240906.
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A .

NPJ vaccines

Mendes AM, Machado M, Gonçalves-Rosa N, Reuling IJ, Foquet L, Marques C, Salman AM, Yang ASP, Moser KA, Dwivedi A, Hermsen CC, Jiménez-Díaz B, Viera S, Santos JM, Albuquerque I, Bhatia SN, Bial J, Angulo-Barturen I, Silva JC, Leroux-Roels G, Janse CJ, Khan SM, Mota MM, Sauerwein RW, Prudêncio M.
PMID: 30155278
NPJ Vaccines. 2018 Aug 24;3:33. doi: 10.1038/s41541-018-0068-2. eCollection 2018.

There is a pressing need for safe and highly effective

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Mendes AM, Machado M, Gonçalves-Rosa N, et al. A . NPJ Vaccines. 2018;3:33doi: 10.1038/s41541-018-0068-2.
Mendes, A. M., Machado, M., Gonçalves-Rosa, N., Reuling, I. J., Foquet, L., Marques, C., Salman, A. M., Yang, A. S. P., Moser, K. A., Dwivedi, A., Hermsen, C. C., Jiménez-Díaz, B., Viera, S., Santos, J. M., Albuquerque, I., Bhatia, S. N., Bial, J., Angulo-Barturen, I., Silva, J. C., Leroux-Roels, G., Janse, C. J., Khan, S. M., Mota, M. M., Sauerwein, R. W., & Prudêncio, M. (2018). A . NPJ vaccines, 333. https://doi.org/10.1038/s41541-018-0068-2
Mendes, António M, et al. "A ." NPJ vaccines vol. 3 (2018): 33. doi: https://doi.org/10.1038/s41541-018-0068-2
Mendes AM, Machado M, Gonçalves-Rosa N, Reuling IJ, Foquet L, Marques C, Salman AM, Yang ASP, Moser KA, Dwivedi A, Hermsen CC, Jiménez-Díaz B, Viera S, Santos JM, Albuquerque I, Bhatia SN, Bial J, Angulo-Barturen I, Silva JC, Leroux-Roels G, Janse CJ, Khan SM, Mota MM, Sauerwein RW, Prudêncio M. A . NPJ Vaccines. 2018 Aug 24;3:33. doi: 10.1038/s41541-018-0068-2. eCollection 2018. PMID: 30155278; PMCID: PMC6109154.
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Deep convolutional neural networks for estimating porous material parameters with ultrasound tomography.

The Journal of the Acoustical Society of America

Lähivaara T, Kärkkäinen L, Huttunen JMJ, Hesthaven JS.
PMID: 29495714
J Acoust Soc Am. 2018 Feb;143(2):1148. doi: 10.1121/1.5024341.

The feasibility of data based machine learning applied to ultrasound tomography is studied to estimate water-saturated porous material parameters. In this work, the data to train the neural networks is simulated by solving wave propagation in coupled poroviscoelastic-viscoelastic-acoustic media....

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Lähivaara T, Kärkkäinen L, Huttunen JMJ, et al. Deep convolutional neural networks for estimating porous material parameters with ultrasound tomography. J Acoust Soc Am. 2018;143(2):1148doi: 10.1121/1.5024341.
Lähivaara, T., Kärkkäinen, L., Huttunen, J. M. J., & Hesthaven, J. S. (2018). Deep convolutional neural networks for estimating porous material parameters with ultrasound tomography. The Journal of the Acoustical Society of America, 143(2), 1148. https://doi.org/10.1121/1.5024341
Lähivaara, Timo, et al. "Deep convolutional neural networks for estimating porous material parameters with ultrasound tomography." The Journal of the Acoustical Society of America vol. 143,2 (2018): 1148. doi: https://doi.org/10.1121/1.5024341
Lähivaara T, Kärkkäinen L, Huttunen JMJ, Hesthaven JS. Deep convolutional neural networks for estimating porous material parameters with ultrasound tomography. J Acoust Soc Am. 2018 Feb;143(2):1148. doi: 10.1121/1.5024341. PMID: 29495714.
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Adsorption and removal of graphene dispersants.

Journal of colloid and interface science

Irin F, Hansen MJ, Bari R, Parviz D, Metzler SD, Bhattacharia SK, Green MJ.
PMID: 25681785
J Colloid Interface Sci. 2015 May 15;446:282-9. doi: 10.1016/j.jcis.2015.01.058. Epub 2015 Jan 28.

We demonstrate three different techniques (dialysis, vacuum filtration, and spray drying) for removal of dispersants from liquid-exfoliated graphene. We evaluate these techniques for elimination of dispersants from both the bulk liquid phase and from the graphene surface. Thermogravimetric analysis...

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Irin F, Hansen MJ, Bari R, et al. Adsorption and removal of graphene dispersants. J Colloid Interface Sci. 2015;446:282-9doi: 10.1016/j.jcis.2015.01.058.
Irin, F., Hansen, M. J., Bari, R., Parviz, D., Metzler, S. D., Bhattacharia, S. K., & Green, M. J. (2015). Adsorption and removal of graphene dispersants. Journal of colloid and interface science, 446282-9. https://doi.org/10.1016/j.jcis.2015.01.058
Irin, Fahmida, et al. "Adsorption and removal of graphene dispersants." Journal of colloid and interface science vol. 446 (2015): 282-9. doi: https://doi.org/10.1016/j.jcis.2015.01.058
Irin F, Hansen MJ, Bari R, Parviz D, Metzler SD, Bhattacharia SK, Green MJ. Adsorption and removal of graphene dispersants. J Colloid Interface Sci. 2015 May 15;446:282-9. doi: 10.1016/j.jcis.2015.01.058. Epub 2015 Jan 28. PMID: 25681785.
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Applied Potentials in Variable-Charge Reactive Force Fields for Electrochemical Systems.

The journal of physical chemistry. A

Liang T, Antony AC, Akhade SA, Janik MJ, Sinnott SB.
PMID: 29257690
J Phys Chem A. 2018 Jan 18;122(2):631-638. doi: 10.1021/acs.jpca.7b06064. Epub 2018 Jan 05.

An atomic description of water dynamics and electrochemical properties at electrode-electrolyte interfaces is presented using molecular dynamics with the third generation of the charge-optimized many-body (COMB3) potential framework. Externally applied potentials in electrochemical applications were simulated by offsetting electronegativity...

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Liang T, Antony AC, Akhade SA, et al. Applied Potentials in Variable-Charge Reactive Force Fields for Electrochemical Systems. J Phys Chem A. 2018;122(2):631-638doi: 10.1021/acs.jpca.7b06064.
Liang, T., Antony, A. C., Akhade, S. A., Janik, M. J., & Sinnott, S. B. (2018). Applied Potentials in Variable-Charge Reactive Force Fields for Electrochemical Systems. The journal of physical chemistry. A, 122(2), 631-638. https://doi.org/10.1021/acs.jpca.7b06064
Liang, Tao, et al. "Applied Potentials in Variable-Charge Reactive Force Fields for Electrochemical Systems." The journal of physical chemistry. A vol. 122,2 (2018): 631-638. doi: https://doi.org/10.1021/acs.jpca.7b06064
Liang T, Antony AC, Akhade SA, Janik MJ, Sinnott SB. Applied Potentials in Variable-Charge Reactive Force Fields for Electrochemical Systems. J Phys Chem A. 2018 Jan 18;122(2):631-638. doi: 10.1021/acs.jpca.7b06064. Epub 2018 Jan 05. PMID: 29257690.
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Ag(I)-Catalyzed Synthesis of Azabicyclic Alkaloid Frameworks from Ketimine-Tethered Ynones: Total Synthesis of Indolizidine 209D.

Organic letters

Ho HE, James MJ, O'Brien P, Taylor RJK, Unsworth WP.
PMID: 29425045
Org Lett. 2018 Mar 02;20(5):1439-1443. doi: 10.1021/acs.orglett.8b00225. Epub 2018 Feb 09.

An efficient Ag(I)-catalyzed π-acid activation method for the cyclization of cyclic ketimine-tethered ynones is reported. Various nitrogen-containing scaffolds commonly found in bioactive alkaloids can be prepared in high yields, and the utility of the method is demonstrated by a...

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Ho HE, James MJ, O'Brien P, et al. Ag(I)-Catalyzed Synthesis of Azabicyclic Alkaloid Frameworks from Ketimine-Tethered Ynones: Total Synthesis of Indolizidine 209D. Org Lett. 2018;20(5):1439-1443doi: 10.1021/acs.orglett.8b00225.
Ho, H. E., James, M. J., O'Brien, P., Taylor, R. J. K., & Unsworth, W. P. (2018). Ag(I)-Catalyzed Synthesis of Azabicyclic Alkaloid Frameworks from Ketimine-Tethered Ynones: Total Synthesis of Indolizidine 209D. Organic letters, 20(5), 1439-1443. https://doi.org/10.1021/acs.orglett.8b00225
Ho, Hon Eong, et al. "Ag(I)-Catalyzed Synthesis of Azabicyclic Alkaloid Frameworks from Ketimine-Tethered Ynones: Total Synthesis of Indolizidine 209D." Organic letters vol. 20,5 (2018): 1439-1443. doi: https://doi.org/10.1021/acs.orglett.8b00225
Ho HE, James MJ, O'Brien P, Taylor RJK, Unsworth WP. Ag(I)-Catalyzed Synthesis of Azabicyclic Alkaloid Frameworks from Ketimine-Tethered Ynones: Total Synthesis of Indolizidine 209D. Org Lett. 2018 Mar 02;20(5):1439-1443. doi: 10.1021/acs.orglett.8b00225. Epub 2018 Feb 09. PMID: 29425045.
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Juvenile rockfish show resilience to CO.

Conservation physiology

Davis BE, Komoroske LM, Hansen MJ, Poletto JB, Perry EN, Miller NA, Ehlman SM, Wheeler SG, Sih A, Todgham AE, Fangue NA.
PMID: 30018763
Conserv Physiol. 2018 Jul 10;6(1):coy038. doi: 10.1093/conphys/coy038. eCollection 2018.

California's coastal ecosystems are forecasted to undergo shifting ocean conditions due to climate change, some of which may negatively impact recreational and commercial fish populations. To understand if fish populations have the capacity to respond to multiple stressors, it...

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Davis BE, Komoroske LM, Hansen MJ, et al. Juvenile rockfish show resilience to CO. Conserv Physiol. 2018;6(1):coy038doi: 10.1093/conphys/coy038.
Davis, B. E., Komoroske, L. M., Hansen, M. J., Poletto, J. B., Perry, E. N., Miller, N. A., Ehlman, S. M., Wheeler, S. G., Sih, A., Todgham, A. E., & Fangue, N. A. (2018). Juvenile rockfish show resilience to CO. Conservation physiology, 6(1), coy038. https://doi.org/10.1093/conphys/coy038
Davis, Brittany E, et al. "Juvenile rockfish show resilience to CO." Conservation physiology vol. 6,1 (2018): coy038. doi: https://doi.org/10.1093/conphys/coy038
Davis BE, Komoroske LM, Hansen MJ, Poletto JB, Perry EN, Miller NA, Ehlman SM, Wheeler SG, Sih A, Todgham AE, Fangue NA. Juvenile rockfish show resilience to CO. Conserv Physiol. 2018 Jul 10;6(1):coy038. doi: 10.1093/conphys/coy038. eCollection 2018. PMID: 30018763; PMCID: PMC6041801.
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Energetics of exciton binding and dissociation in polythiophenes: a tight binding approach.

Physical chemistry chemical physics : PCCP

Bombile JH, Janik MJ, Milner ST.
PMID: 31134991
Phys Chem Chem Phys. 2019 Jun 05;21(22):11999-12011. doi: 10.1039/c9cp01116a.

Organic photovoltaics offer a potential low-cost alternative to inorganic solar cells. Crucial to the performance of these devices is the generation of free charges, which occurs through the dissociation of excitons. Here we study excitons in polythiophenes, their stability...

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Bombile JH, Janik MJ, Milner ST. Energetics of exciton binding and dissociation in polythiophenes: a tight binding approach. Phys Chem Chem Phys. 2019;21(22):11999-12011doi: 10.1039/c9cp01116a.
Bombile, J. H., Janik, M. J., & Milner, S. T. (2019). Energetics of exciton binding and dissociation in polythiophenes: a tight binding approach. Physical chemistry chemical physics : PCCP, 21(22), 11999-12011. https://doi.org/10.1039/c9cp01116a
Bombile, Joel H, et al. "Energetics of exciton binding and dissociation in polythiophenes: a tight binding approach." Physical chemistry chemical physics : PCCP vol. 21,22 (2019): 11999-12011. doi: https://doi.org/10.1039/c9cp01116a
Bombile JH, Janik MJ, Milner ST. Energetics of exciton binding and dissociation in polythiophenes: a tight binding approach. Phys Chem Chem Phys. 2019 Jun 05;21(22):11999-12011. doi: 10.1039/c9cp01116a. PMID: 31134991.
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Microglia and Perivascular Macrophages Act as Antigen Presenting Cells to Promote CD8 T Cell Infiltration of the Brain.

Frontiers in immunology

Goddery EN, Fain CE, Lipovsky CG, Ayasoufi K, Yokanovich LT, Malo CS, Khadka RH, Tritz ZP, Jin F, Hansen MJ, Johnson AJ.
PMID: 34526998
Front Immunol. 2021 Aug 30;12:726421. doi: 10.3389/fimmu.2021.726421. eCollection 2021.

CD8 T cell infiltration of the central nervous system (CNS) is necessary for host protection but contributes to neuropathology. Antigen presenting cells (APCs) situated at CNS borders are thought to mediate T cell entry into the parenchyma during neuroinflammation....

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Goddery EN, Fain CE, Lipovsky CG, et al. Microglia and Perivascular Macrophages Act as Antigen Presenting Cells to Promote CD8 T Cell Infiltration of the Brain. Front Immunol. 2021;12:726421doi: 10.3389/fimmu.2021.726421.
Goddery, E. N., Fain, C. E., Lipovsky, C. G., Ayasoufi, K., Yokanovich, L. T., Malo, C. S., Khadka, R. H., Tritz, Z. P., Jin, F., Hansen, M. J., & Johnson, A. J. (2021). Microglia and Perivascular Macrophages Act as Antigen Presenting Cells to Promote CD8 T Cell Infiltration of the Brain. Frontiers in immunology, 12726421. https://doi.org/10.3389/fimmu.2021.726421
Goddery, Emma N, et al. "Microglia and Perivascular Macrophages Act as Antigen Presenting Cells to Promote CD8 T Cell Infiltration of the Brain." Frontiers in immunology vol. 12 (2021): 726421. doi: https://doi.org/10.3389/fimmu.2021.726421
Goddery EN, Fain CE, Lipovsky CG, Ayasoufi K, Yokanovich LT, Malo CS, Khadka RH, Tritz ZP, Jin F, Hansen MJ, Johnson AJ. Microglia and Perivascular Macrophages Act as Antigen Presenting Cells to Promote CD8 T Cell Infiltration of the Brain. Front Immunol. 2021 Aug 30;12:726421. doi: 10.3389/fimmu.2021.726421. eCollection 2021. PMID: 34526998; PMCID: PMC8435747.
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Hemozoin-mediated inflammasome activation limits long-lived anti-malarial immunity.

Cell reports

Pack AD, Schwartzhoff PV, Zacharias ZR, Fernandez-Ruiz D, Heath WR, Gurung P, Legge KL, Janse CJ, Butler NS.
PMID: 34433049
Cell Rep. 2021 Aug 24;36(8):109586. doi: 10.1016/j.celrep.2021.109586.

During acute malaria, most individuals mount robust inflammatory responses that limit parasite burden. However, long-lived sterilizing anti-malarial memory responses are not efficiently induced, even following repeated Plasmodium exposures. Using multiple Plasmodium species, genetically modified parasites, and combinations of host...

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Pack AD, Schwartzhoff PV, Zacharias ZR, et al. Hemozoin-mediated inflammasome activation limits long-lived anti-malarial immunity. Cell Rep. 2021;36(8):109586doi: 10.1016/j.celrep.2021.109586.
Pack, A. D., Schwartzhoff, P. V., Zacharias, Z. R., Fernandez-Ruiz, D., Heath, W. R., Gurung, P., Legge, K. L., Janse, C. J., & Butler, N. S. (2021). Hemozoin-mediated inflammasome activation limits long-lived anti-malarial immunity. Cell reports, 36(8), 109586. https://doi.org/10.1016/j.celrep.2021.109586
Pack, Angela D, et al. "Hemozoin-mediated inflammasome activation limits long-lived anti-malarial immunity." Cell reports vol. 36,8 (2021): 109586. doi: https://doi.org/10.1016/j.celrep.2021.109586
Pack AD, Schwartzhoff PV, Zacharias ZR, Fernandez-Ruiz D, Heath WR, Gurung P, Legge KL, Janse CJ, Butler NS. Hemozoin-mediated inflammasome activation limits long-lived anti-malarial immunity. Cell Rep. 2021 Aug 24;36(8):109586. doi: 10.1016/j.celrep.2021.109586. PMID: 34433049; PMCID: PMC8432597.
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A Thiol-Mediated Three-Step Ring Expansion Cascade for the Conversion of Indoles into Functionalized Quinolines.

Organic letters

Inprung N, James MJ, Taylor RJK, Unsworth WP.
PMID: 33645997
Org Lett. 2021 Mar 19;23(6):2063-2068. doi: 10.1021/acs.orglett.1c00205. Epub 2021 Mar 01.

An operationally simple, high yielding three-step cascade process is described for the direct conversion of indole-tethered ynones into functionalized quinolines. A single "multitasking" thiol reagent is used to promote a three-step dearomatizing spirocyclization, nucleophilic substitution, and one-atom ring expansion...

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Inprung N, James MJ, Taylor RJK, et al. A Thiol-Mediated Three-Step Ring Expansion Cascade for the Conversion of Indoles into Functionalized Quinolines. Org Lett. 2021;23(6):2063-2068doi: 10.1021/acs.orglett.1c00205.
Inprung, N., James, M. J., Taylor, R. J. K., & Unsworth, W. P. (2021). A Thiol-Mediated Three-Step Ring Expansion Cascade for the Conversion of Indoles into Functionalized Quinolines. Organic letters, 23(6), 2063-2068. https://doi.org/10.1021/acs.orglett.1c00205
Inprung, Nantachai, et al. "A Thiol-Mediated Three-Step Ring Expansion Cascade for the Conversion of Indoles into Functionalized Quinolines." Organic letters vol. 23,6 (2021): 2063-2068. doi: https://doi.org/10.1021/acs.orglett.1c00205
Inprung N, James MJ, Taylor RJK, Unsworth WP. A Thiol-Mediated Three-Step Ring Expansion Cascade for the Conversion of Indoles into Functionalized Quinolines. Org Lett. 2021 Mar 19;23(6):2063-2068. doi: 10.1021/acs.orglett.1c00205. Epub 2021 Mar 01. PMID: 33645997; PMCID: PMC8041380.
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G3BP2-KIT drives leukemia amenable to kinase inhibition in Ph-like ALL.

Blood advances

Iacobucci I, Fukano R, Friske J, Qu C, Janke LJ, Zhao Y, Baviskar P, Backhaus E, Chockley P, Seth A, Laird AD, Advani AS, Mullighan CG.
PMID: 34991158
Blood Adv. 2022 Jan 06; doi: 10.1182/bloodadvances.2021004854. Epub 2022 Jan 06.

No abstract available.

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Iacobucci I, Fukano R, Friske J, et al. G3BP2-KIT drives leukemia amenable to kinase inhibition in Ph-like ALL. Blood Adv. 2022;doi: 10.1182/bloodadvances.2021004854.
Iacobucci, I., Fukano, R., Friske, J., Qu, C., Janke, L. J., Zhao, Y., Baviskar, P., Backhaus, E., Chockley, P., Seth, A., Laird, A. D., Advani, A. S., & Mullighan, C. G. (2022). G3BP2-KIT drives leukemia amenable to kinase inhibition in Ph-like ALL. Blood advances, . https://doi.org/10.1182/bloodadvances.2021004854
Iacobucci, Ilaria, et al. "G3BP2-KIT drives leukemia amenable to kinase inhibition in Ph-like ALL." Blood advances vol. (2022). doi: https://doi.org/10.1182/bloodadvances.2021004854
Iacobucci I, Fukano R, Friske J, Qu C, Janke LJ, Zhao Y, Baviskar P, Backhaus E, Chockley P, Seth A, Laird AD, Advani AS, Mullighan CG. G3BP2-KIT drives leukemia amenable to kinase inhibition in Ph-like ALL. Blood Adv. 2022 Jan 06; doi: 10.1182/bloodadvances.2021004854. Epub 2022 Jan 06. PMID: 34991158.
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