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Complete genome for .

Microbial genomics

Bossé JT, Li Y, Cohen LM, Stegger M, Angen Ø, Lacouture S, Gottschalk M, Lei L, Koene M, Kuhnert P, Bandara AB, Inzana TJ, Holden MTG, Harris D, Oshota O, Maskell DJ, Tucker AW, Wren BW, Rycroft AN, Langford PR, On Behalf Of The BRaDP T Consortium.
PMID: 34818145
Microb Genom. 2021 Nov;7(11). doi: 10.1099/mgen.0.000687.

We report here the complete genome sequence of the widely studied

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Bossé JT, Li Y, Cohen LM, et al. Complete genome for . Microb Genom. 2021;7(11)doi: 10.1099/mgen.0.000687.
Bossé, J. T., Li, Y., Cohen, L. M., Stegger, M., Angen, �. �., Lacouture, S., Gottschalk, M., Lei, L., Koene, M., Kuhnert, P., Bandara, A. B., Inzana, T. J., Holden, M. T. G., Harris, D., Oshota, O., Maskell, D. J., Tucker, A. W., Wren, B. W., Rycroft, A. N., Langford, P. R., & On Behalf Of The BRaDP T Consortium. (2021). Complete genome for . Microbial genomics, 7(11), . https://doi.org/10.1099/mgen.0.000687
Bossé, Janine T, et al. "Complete genome for ." Microbial genomics vol. 7,11 (2021). doi: https://doi.org/10.1099/mgen.0.000687
Bossé JT, Li Y, Cohen LM, Stegger M, Angen Ø, Lacouture S, Gottschalk M, Lei L, Koene M, Kuhnert P, Bandara AB, Inzana TJ, Holden MTG, Harris D, Oshota O, Maskell DJ, Tucker AW, Wren BW, Rycroft AN, Langford PR, On Behalf Of The BRaDP T Consortium. Complete genome for . Microb Genom. 2021 Nov;7(11). doi: 10.1099/mgen.0.000687. PMID: 34818145; PMCID: PMC8743550.
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Mutational Signatures of Replication Timing and Epigenetic Modification Persist through the Global Divergence of Mutation Spectra across the Great Ape Phylogeny.

Genome biology and evolution

Goldberg ME, Harris K.
PMID: 33983415
Genome Biol Evol. 2022 Jan 04;14(1). doi: 10.1093/gbe/evab104.

Great ape clades exhibit variation in the relative mutation rates of different three-base-pair genomic motifs, with closely related species having more similar mutation spectra than distantly related species. This pattern cannot be explained by classical demographic or selective forces,...

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Goldberg ME, Harris K. Mutational Signatures of Replication Timing and Epigenetic Modification Persist through the Global Divergence of Mutation Spectra across the Great Ape Phylogeny. Genome Biol Evol. 2022;14(1)doi: 10.1093/gbe/evab104.
Goldberg, M. E., & Harris, K. (2022). Mutational Signatures of Replication Timing and Epigenetic Modification Persist through the Global Divergence of Mutation Spectra across the Great Ape Phylogeny. Genome biology and evolution, 14(1), . https://doi.org/10.1093/gbe/evab104
Goldberg, Michael E, and Harris, Kelley. "Mutational Signatures of Replication Timing and Epigenetic Modification Persist through the Global Divergence of Mutation Spectra across the Great Ape Phylogeny." Genome biology and evolution vol. 14,1 (2022). doi: https://doi.org/10.1093/gbe/evab104
Goldberg ME, Harris K. Mutational Signatures of Replication Timing and Epigenetic Modification Persist through the Global Divergence of Mutation Spectra across the Great Ape Phylogeny. Genome Biol Evol. 2022 Jan 04;14(1). doi: 10.1093/gbe/evab104. PMID: 33983415; PMCID: PMC8743035.
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Multimodal Mapping of the Tumor and Peripheral Blood Immune Landscape in Human Pancreatic Cancer.

Nature cancer

Steele NG, Carpenter ES, Kemp SB, Sirihorachai V, The S, Delrosario L, Lazarus J, Amir ED, Gunchick V, Espinoza C, Bell S, Harris L, Lima F, Irizarry-Negron V, Paglia D, Macchia J, Chu AKY, Schofield H, Wamsteker EJ, Kwon R, Schulman A, Prabhu A, Law R, Sondhi A, Yu J, Patel A, Donahue K, Nathan H, Cho C, Anderson MA, Sahai V, Lyssiotis CA, Zou W, Allen BL, Rao A, Crawford HC, Bednar F, Frankel TL, Pasca di Magliano M.
PMID: 34296197
Nat Cancer. 2020 Nov;1(11):1097-1112. doi: 10.1038/s43018-020-00121-4. Epub 2020 Oct 26.

Pancreatic ductal adenocarcinoma (PDA) is characterized by an immune-suppressive tumor microenvironment that renders it largely refractory to immunotherapy. We implemented a multimodal analysis approach to elucidate the immune landscape in PDA. Using a combination of CyTOF, single-cell RNA sequencing,...

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Steele NG, Carpenter ES, Kemp SB, et al. Multimodal Mapping of the Tumor and Peripheral Blood Immune Landscape in Human Pancreatic Cancer. Nat Cancer. 2020;1(11):1097-1112doi: 10.1038/s43018-020-00121-4.
Steele, N. G., Carpenter, E. S., Kemp, S. B., Sirihorachai, V., The, S., Delrosario, L., Lazarus, J., Amir, E. D., Gunchick, V., Espinoza, C., Bell, S., Harris, L., Lima, F., Irizarry-Negron, V., Paglia, D., Macchia, J., Chu, A. K. Y., Schofield, H., Wamsteker, E. J., Kwon, R., Schulman, A., Prabhu, A., Law, R., Sondhi, A., Yu, J., Patel, A., Donahue, K., Nathan, H., Cho, C., Anderson, M. A., Sahai, V., Lyssiotis, C. A., Zou, W., Allen, B. L., Rao, A., Crawford, H. C., Bednar, F., Frankel, T. L., & Pasca di Magliano, M. (2020). Multimodal Mapping of the Tumor and Peripheral Blood Immune Landscape in Human Pancreatic Cancer. Nature cancer, 1(11), 1097-1112. https://doi.org/10.1038/s43018-020-00121-4
Steele, Nina G, et al. "Multimodal Mapping of the Tumor and Peripheral Blood Immune Landscape in Human Pancreatic Cancer." Nature cancer vol. 1,11 (2020): 1097-1112. doi: https://doi.org/10.1038/s43018-020-00121-4
Steele NG, Carpenter ES, Kemp SB, Sirihorachai V, The S, Delrosario L, Lazarus J, Amir ED, Gunchick V, Espinoza C, Bell S, Harris L, Lima F, Irizarry-Negron V, Paglia D, Macchia J, Chu AKY, Schofield H, Wamsteker EJ, Kwon R, Schulman A, Prabhu A, Law R, Sondhi A, Yu J, Patel A, Donahue K, Nathan H, Cho C, Anderson MA, Sahai V, Lyssiotis CA, Zou W, Allen BL, Rao A, Crawford HC, Bednar F, Frankel TL, Pasca di Magliano M. Multimodal Mapping of the Tumor and Peripheral Blood Immune Landscape in Human Pancreatic Cancer. Nat Cancer. 2020 Nov;1(11):1097-1112. doi: 10.1038/s43018-020-00121-4. Epub 2020 Oct 26. PMID: 34296197; PMCID: PMC8294470.
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Primary orthostatic tremor and orthostatic tremor-plus in dogs: 60 cases (2003-2020).

Journal of veterinary internal medicine

Liatis T, Gutierrez-Quintana R, Mari L, Czopowicz M, Polidoro D, Bhatti SFM, Cozzi F, Tirrito F, Brocal J, José-López R, Kaczmarska A, Cappello R, Harris G, Alves L, Rusbridge C, Rossmeisl JH.
PMID: 34897811
J Vet Intern Med. 2021 Dec 12; doi: 10.1111/jvim.16328. Epub 2021 Dec 12.

BACKGROUND: Orthostatic tremor (OT) is a rare movement disorder characterized by high-frequency (>12 Hz) involuntary, rhythmic, sinusoidal movements affecting predominantly the limbs while standing.OBJECTIVE: To describe the signalment, presenting complaints, phenotype, diagnostic findings, treatment, and outcome of a large...

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Liatis T, Gutierrez-Quintana R, Mari L, et al. Primary orthostatic tremor and orthostatic tremor-plus in dogs: 60 cases (2003-2020). J Vet Intern Med. 2021;doi: 10.1111/jvim.16328.
Liatis, T., Gutierrez-Quintana, R., Mari, L., Czopowicz, M., Polidoro, D., Bhatti, S. F. M., Cozzi, F., Tirrito, F., Brocal, J., José-López, R., Kaczmarska, A., Cappello, R., Harris, G., Alves, L., Rusbridge, C., & Rossmeisl, J. H. (2021). Primary orthostatic tremor and orthostatic tremor-plus in dogs: 60 cases (2003-2020). Journal of veterinary internal medicine, . https://doi.org/10.1111/jvim.16328
Liatis, Theofanis, et al. "Primary orthostatic tremor and orthostatic tremor-plus in dogs: 60 cases (2003-2020)." Journal of veterinary internal medicine vol. (2021). doi: https://doi.org/10.1111/jvim.16328
Liatis T, Gutierrez-Quintana R, Mari L, Czopowicz M, Polidoro D, Bhatti SFM, Cozzi F, Tirrito F, Brocal J, José-López R, Kaczmarska A, Cappello R, Harris G, Alves L, Rusbridge C, Rossmeisl JH. Primary orthostatic tremor and orthostatic tremor-plus in dogs: 60 cases (2003-2020). J Vet Intern Med. 2021 Dec 12; doi: 10.1111/jvim.16328. Epub 2021 Dec 12. PMID: 34897811.
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Past due: improving the naming of psychiatric disorders.

The lancet. Psychiatry

Cohen BM, Öngür D, Harris PQ.
PMID: 34998479
Lancet Psychiatry. 2022 Jan 06; doi: 10.1016/S2215-0366(21)00478-8. Epub 2022 Jan 06.

No abstract available.

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Cohen BM, Öngür D, Harris PQ. Past due: improving the naming of psychiatric disorders. Lancet Psychiatry. 2022;doi: 10.1016/S2215-0366(21)00478-8.
Cohen, B. M., Öngür, D., & Harris, P. Q. (2022). Past due: improving the naming of psychiatric disorders. The lancet. Psychiatry, . https://doi.org/10.1016/S2215-0366(21)00478-8
Cohen, Bruce M, et al. "Past due: improving the naming of psychiatric disorders." The lancet. Psychiatry vol. (2022). doi: https://doi.org/10.1016/S2215-0366(21)00478-8
Cohen BM, Öngür D, Harris PQ. Past due: improving the naming of psychiatric disorders. Lancet Psychiatry. 2022 Jan 06; doi: 10.1016/S2215-0366(21)00478-8. Epub 2022 Jan 06. PMID: 34998479.
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Clinical outcomes following pharyngolaryngectomy reconstruction: a 20-year single centre study.

The Journal of laryngology and otology

Layton T, Thomas R, Harris C, Holmes S, Fraser L, Silva P, Winter SC.
PMID: 35000624
J Laryngol Otol. 2022 Jan 10;1-18. doi: 10.1017/S0022215122000019. Epub 2022 Jan 10.

No abstract available.

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Layton T, Thomas R, Harris C, et al. Clinical outcomes following pharyngolaryngectomy reconstruction: a 20-year single centre study. J Laryngol Otol. 2022;1-18doi: 10.1017/S0022215122000019.
Layton, T., Thomas, R., Harris, C., Holmes, S., Fraser, L., Silva, P., & Winter, S. C. (2022). Clinical outcomes following pharyngolaryngectomy reconstruction: a 20-year single centre study. The Journal of laryngology and otology, 1-18. https://doi.org/10.1017/S0022215122000019
Layton, Thomas, et al. "Clinical outcomes following pharyngolaryngectomy reconstruction: a 20-year single centre study." The Journal of laryngology and otology vol. (2022): 1-18. doi: https://doi.org/10.1017/S0022215122000019
Layton T, Thomas R, Harris C, Holmes S, Fraser L, Silva P, Winter SC. Clinical outcomes following pharyngolaryngectomy reconstruction: a 20-year single centre study. J Laryngol Otol. 2022 Jan 10;1-18. doi: 10.1017/S0022215122000019. Epub 2022 Jan 10. PMID: 35000624.
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NRF2 activation inhibits valproic acid-induced neural tube defects in mice.

Neurotoxicology and teratology

Piorczynski TB, Lapehn S, Ringer KP, Allen SA, Johnson GA, Call K, Lucas SM, Harris C, Hansen JM.
PMID: 34737154
Neurotoxicol Teratol. 2021 Oct 29;89:107039. doi: 10.1016/j.ntt.2021.107039. Epub 2021 Oct 29.

Valproic acid (VPA) is a widely prescribed medication that has traditionally been used to treat epilepsy, yet embryonic exposure to VPA increases the risk of the fetus developing neural tube defects (NTDs). While the mechanism by which VPA causes...

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Piorczynski TB, Lapehn S, Ringer KP, et al. NRF2 activation inhibits valproic acid-induced neural tube defects in mice. Neurotoxicol Teratol. 2021;89:107039doi: 10.1016/j.ntt.2021.107039.
Piorczynski, T. B., Lapehn, S., Ringer, K. P., Allen, S. A., Johnson, G. A., Call, K., Lucas, S. M., Harris, C., & Hansen, J. M. (2021). NRF2 activation inhibits valproic acid-induced neural tube defects in mice. Neurotoxicology and teratology, 89107039. https://doi.org/10.1016/j.ntt.2021.107039
Piorczynski, Ted B, et al. "NRF2 activation inhibits valproic acid-induced neural tube defects in mice." Neurotoxicology and teratology vol. 89 (2021): 107039. doi: https://doi.org/10.1016/j.ntt.2021.107039
Piorczynski TB, Lapehn S, Ringer KP, Allen SA, Johnson GA, Call K, Lucas SM, Harris C, Hansen JM. NRF2 activation inhibits valproic acid-induced neural tube defects in mice. Neurotoxicol Teratol. 2021 Oct 29;89:107039. doi: 10.1016/j.ntt.2021.107039. Epub 2021 Oct 29. PMID: 34737154.
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Feasibility and Provisional Efficacy of Embedding High-Intensity Interval Training Into Physical Education Lessons: A Pilot Cluster-Randomized Controlled Trial.

Pediatric exercise science

Harris N, Warbrick I, Atkins D, Vandal A, Plank L, Lubans DR.
PMID: 34348226
Pediatr Exerc Sci. 2021 Aug 04;33(4):186-195. doi: 10.1123/pes.2020-0255.

PURPOSE: The aim of this study was to determine the feasibility of generalist school teachers delivering curriculum connected high-intensity interval training in a school's physical education class time.METHOD: Two schools volunteered to participate. A total of 84 students (11.9...

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Harris N, Warbrick I, Atkins D, et al. Feasibility and Provisional Efficacy of Embedding High-Intensity Interval Training Into Physical Education Lessons: A Pilot Cluster-Randomized Controlled Trial. Pediatr Exerc Sci. 2021;33(4):186-195doi: 10.1123/pes.2020-0255.
Harris, N., Warbrick, I., Atkins, D., Vandal, A., Plank, L., & Lubans, D. R. (2021). Feasibility and Provisional Efficacy of Embedding High-Intensity Interval Training Into Physical Education Lessons: A Pilot Cluster-Randomized Controlled Trial. Pediatric exercise science, 33(4), 186-195. https://doi.org/10.1123/pes.2020-0255
Harris, Nigel, et al. "Feasibility and Provisional Efficacy of Embedding High-Intensity Interval Training Into Physical Education Lessons: A Pilot Cluster-Randomized Controlled Trial." Pediatric exercise science vol. 33,4 (2021): 186-195. doi: https://doi.org/10.1123/pes.2020-0255
Harris N, Warbrick I, Atkins D, Vandal A, Plank L, Lubans DR. Feasibility and Provisional Efficacy of Embedding High-Intensity Interval Training Into Physical Education Lessons: A Pilot Cluster-Randomized Controlled Trial. Pediatr Exerc Sci. 2021 Aug 04;33(4):186-195. doi: 10.1123/pes.2020-0255. PMID: 34348226.
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Benefiting the NHS through innovation: how to ensure international health partnerships are genuinely reciprocal.

BMJ global health

Issa H, Townsend W, Harris M.
PMID: 34853066
BMJ Glob Health. 2021 Nov;6. doi: 10.1136/bmjgh-2021-004936.

No abstract available.

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Issa H, Townsend W, Harris M. Benefiting the NHS through innovation: how to ensure international health partnerships are genuinely reciprocal. BMJ Glob Health. 2021;6doi: 10.1136/bmjgh-2021-004936.
Issa, H., Townsend, W., & Harris, M. (2021). Benefiting the NHS through innovation: how to ensure international health partnerships are genuinely reciprocal. BMJ global health, 6. https://doi.org/10.1136/bmjgh-2021-004936
Issa, Hamdi, et al. "Benefiting the NHS through innovation: how to ensure international health partnerships are genuinely reciprocal." BMJ global health vol. 6 (2021). doi: https://doi.org/10.1136/bmjgh-2021-004936
Issa H, Townsend W, Harris M. Benefiting the NHS through innovation: how to ensure international health partnerships are genuinely reciprocal. BMJ Glob Health. 2021 Nov;6. doi: 10.1136/bmjgh-2021-004936. PMID: 34853066; PMCID: PMC8633993.
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Unexpected benefit of COVID-19 hospital restrictions: Reduction in patients isolating with multidrug resistant organisms after restrictions were lifted.

Infection, disease & health

Elliott TM, Hurst C, Doidge M, Hurst T, Harris PN, Gordon LG.
PMID: 34507923
Infect Dis Health. 2021 Aug 18; doi: 10.1016/j.idh.2021.08.001. Epub 2021 Aug 18.

BACKGROUND: During the COVID-19 pandemic, measures to prevent microorganism transmission were implemented across hospitals, including wearing compulsory surgical masks, minimising non-urgent procedures and restricting visitors. Previously, concerns have been raised that MRO-associated deaths could rise during a future pandemic...

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Elliott TM, Hurst C, Doidge M, et al. Unexpected benefit of COVID-19 hospital restrictions: Reduction in patients isolating with multidrug resistant organisms after restrictions were lifted. Infect Dis Health. 2021;doi: 10.1016/j.idh.2021.08.001.
Elliott, T. M., Hurst, C., Doidge, M., Hurst, T., Harris, P. N., & Gordon, L. G. (2021). Unexpected benefit of COVID-19 hospital restrictions: Reduction in patients isolating with multidrug resistant organisms after restrictions were lifted. Infection, disease & health, . https://doi.org/10.1016/j.idh.2021.08.001
Elliott, Thomas M, et al. "Unexpected benefit of COVID-19 hospital restrictions: Reduction in patients isolating with multidrug resistant organisms after restrictions were lifted." Infection, disease & health vol. (2021). doi: https://doi.org/10.1016/j.idh.2021.08.001
Elliott TM, Hurst C, Doidge M, Hurst T, Harris PN, Gordon LG. Unexpected benefit of COVID-19 hospital restrictions: Reduction in patients isolating with multidrug resistant organisms after restrictions were lifted. Infect Dis Health. 2021 Aug 18; doi: 10.1016/j.idh.2021.08.001. Epub 2021 Aug 18. PMID: 34507923; PMCID: PMC8372517.
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An examination of active inference in autistic adults using immersive virtual reality.

Scientific reports

Arthur T, Harris D, Buckingham G, Brosnan M, Wilson M, Williams G, Vine S.
PMID: 34645899
Sci Rep. 2021 Oct 13;11(1):20377. doi: 10.1038/s41598-021-99864-y.

The integration of prior expectations, sensory information, and environmental volatility is proposed to be atypical in Autism Spectrum Disorder, yet few studies have tested these predictive processes in active movement tasks. To address this gap in the research, we...

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Arthur T, Harris D, Buckingham G, et al. An examination of active inference in autistic adults using immersive virtual reality. Sci Rep. 2021;11(1):20377doi: 10.1038/s41598-021-99864-y.
Arthur, T., Harris, D., Buckingham, G., Brosnan, M., Wilson, M., Williams, G., & Vine, S. (2021). An examination of active inference in autistic adults using immersive virtual reality. Scientific reports, 11(1), 20377. https://doi.org/10.1038/s41598-021-99864-y
Arthur, Tom, et al. "An examination of active inference in autistic adults using immersive virtual reality." Scientific reports vol. 11,1 (2021): 20377. doi: https://doi.org/10.1038/s41598-021-99864-y
Arthur T, Harris D, Buckingham G, Brosnan M, Wilson M, Williams G, Vine S. An examination of active inference in autistic adults using immersive virtual reality. Sci Rep. 2021 Oct 13;11(1):20377. doi: 10.1038/s41598-021-99864-y. PMID: 34645899; PMCID: PMC8514518.
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A new automated method for high-throughput carbon and hydrogen isotope analysis of gaseous and dissolved methane at atmospheric concentrations.

Rapid communications in mass spectrometry : RCM

Smith AC, Welsh S, Atkinson H, Harris D, Leng MJ.
PMID: 33738862
Rapid Commun Mass Spectrom. 2021 Jun 30;35(11):e9086. doi: 10.1002/rcm.9086.

RATIONALE: The dual isotope ratio analysis, carbon (δMETHODS: Here we describe a new gas chromatography, pyrolysis/combustion, isotope ratio mass spectrometry (IRMS) system for the automated analysis of either dissolved or gaseous CHRESULTS: The system routinely achieves precision of

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Smith AC, Welsh S, Atkinson H, et al. A new automated method for high-throughput carbon and hydrogen isotope analysis of gaseous and dissolved methane at atmospheric concentrations. Rapid Commun Mass Spectrom. 2021;35(11):e9086doi: 10.1002/rcm.9086.
Smith, A. C., Welsh, S., Atkinson, H., Harris, D., & Leng, M. J. (2021). A new automated method for high-throughput carbon and hydrogen isotope analysis of gaseous and dissolved methane at atmospheric concentrations. Rapid communications in mass spectrometry : RCM, 35(11), e9086. https://doi.org/10.1002/rcm.9086
Smith, Andrew C, et al. "A new automated method for high-throughput carbon and hydrogen isotope analysis of gaseous and dissolved methane at atmospheric concentrations." Rapid communications in mass spectrometry : RCM vol. 35,11 (2021): e9086. doi: https://doi.org/10.1002/rcm.9086
Smith AC, Welsh S, Atkinson H, Harris D, Leng MJ. A new automated method for high-throughput carbon and hydrogen isotope analysis of gaseous and dissolved methane at atmospheric concentrations. Rapid Commun Mass Spectrom. 2021 Jun 30;35(11):e9086. doi: 10.1002/rcm.9086. PMID: 33738862.
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Showing 1357 to 1368 of 3124 entries