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Time-of-flight mass spectrometry: State-of the-art in chemical analysis and molecular science.

Mass spectrometry reviews

Weickhardt C, Moritz F, Grotemeyer J.
PMID: 27082512
Mass Spectrom Rev. 1996;15(3):139-62. doi: 10.1002/(SICI)1098-2787(1996)15:3<139::AID-MAS1>3.0.CO;2-J.

Time-of-flight instruments form a well-established group of mass spectrometers, with its popularity still increasing. This article gives a survey of the technical basics and important instrumental developments in this field. Special notice is taken of factors that limit the...

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Weickhardt C, Moritz F, Grotemeyer J. Time-of-flight mass spectrometry: State-of the-art in chemical analysis and molecular science. Mass Spectrom Rev. 1996;15(3):139-62doi: 10.1002/(SICI)1098-2787(1996)15:3<139::AID-MAS1>3.0.CO;2-J.
Weickhardt, C., Moritz, F., & Grotemeyer, J. (1996). Time-of-flight mass spectrometry: State-of the-art in chemical analysis and molecular science. Mass spectrometry reviews, 15(3), 139-62. https://doi.org/10.1002/(SICI)1098-2787(1996)15:3<139::AID-MAS1>3.0.CO;2-J
Weickhardt, C, et al. "Time-of-flight mass spectrometry: State-of the-art in chemical analysis and molecular science." Mass spectrometry reviews vol. 15,3 (1996): 139-62. doi: https://doi.org/10.1002/(SICI)1098-2787(1996)15:3<139::AID-MAS1>3.0.CO;2-J
Weickhardt C, Moritz F, Grotemeyer J. Time-of-flight mass spectrometry: State-of the-art in chemical analysis and molecular science. Mass Spectrom Rev. 1996;15(3):139-62. doi: 10.1002/(SICI)1098-2787(1996)15:3<139::AID-MAS1>3.0.CO;2-J. PMID: 27082512.
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Complexity against current cancer research: Are we on the wrong track?.

International journal of cancer

Kasikci Y, Gronemeyer H.
PMID: 34921726
Int J Cancer. 2021 Dec 18; doi: 10.1002/ijc.33912. Epub 2021 Dec 18.

Cancer genetics has led to major discoveries, including protooncogene and tumor-suppressor concepts, and cancer genomics generated concepts like driver and passenger genes, revealed tumor heterogeneity and clonal evolution. Reconstructing trajectories of tumorigenesis using spatial and single-cell genomics is possible....

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Kasikci Y, Gronemeyer H. Complexity against current cancer research: Are we on the wrong track?. Int J Cancer. 2021;doi: 10.1002/ijc.33912.
Kasikci, Y., & Gronemeyer, H. (2021). Complexity against current cancer research: Are we on the wrong track?. International journal of cancer, . https://doi.org/10.1002/ijc.33912
Kasikci, Yasenya, and Gronemeyer, Hinrich. "Complexity against current cancer research: Are we on the wrong track?." International journal of cancer vol. (2021). doi: https://doi.org/10.1002/ijc.33912
Kasikci Y, Gronemeyer H. Complexity against current cancer research: Are we on the wrong track?. Int J Cancer. 2021 Dec 18; doi: 10.1002/ijc.33912. Epub 2021 Dec 18. PMID: 34921726.
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Preface to the special issue of Mass Spectrometry Reviews.

Mass spectrometry reviews

Kuck D, Grotemeyer J.
PMID: 27862143
Mass Spectrom Rev. 2017 Jan;36(1):3. doi: 10.1002/mas.21526. Epub 2016 Nov 09.

No abstract available.

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Kuck D, Grotemeyer J. Preface to the special issue of Mass Spectrometry Reviews. Mass Spectrom Rev. 2016;36(1):3doi: 10.1002/mas.21526.
Kuck, D., & Grotemeyer, J. (2017). Preface to the special issue of Mass Spectrometry Reviews. Mass spectrometry reviews, 36(1), 3. https://doi.org/10.1002/mas.21526
Kuck, Dietmar, and Grotemeyer, Jürgen. "Preface to the special issue of Mass Spectrometry Reviews." Mass spectrometry reviews vol. 36,1 (2017): 3. doi: https://doi.org/10.1002/mas.21526
Kuck D, Grotemeyer J. Preface to the special issue of Mass Spectrometry Reviews. Mass Spectrom Rev. 2017 Jan;36(1):3. doi: 10.1002/mas.21526. Epub 2016 Nov 09. PMID: 27862143.
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Determination of the binding energies in aromatic clusters: resonance-enhanced multi- photon ionization and mass analyzed threshold ionization investigation of the dichlorobenzene-argon complexes.

European journal of mass spectrometry (Chichester, England)

Gaber A, Riese M, Witte F, Grotemeyer J.
PMID: 19423920
Eur J Mass Spectrom (Chichester). 2009;15(2):349-59. doi: 10.1255/ejms.990.

Resonance-enhanced multi-photon ionization (REMPI) and mass-analyzed threshold ionization (MATI) spectroscopic investigations were applied to the van der Waals complexes of the three dichlorobenzene isomers with argon. From the REMPI spectra it is concluded that the argon atom is shifted...

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Gaber A, Riese M, Witte F, et al. Determination of the binding energies in aromatic clusters: resonance-enhanced multi- photon ionization and mass analyzed threshold ionization investigation of the dichlorobenzene-argon complexes. Eur J Mass Spectrom (Chichester). 2009;15(2):349-59doi: 10.1255/ejms.990.
Gaber, A., Riese, M., Witte, F., & Grotemeyer, J. (2009). Determination of the binding energies in aromatic clusters: resonance-enhanced multi- photon ionization and mass analyzed threshold ionization investigation of the dichlorobenzene-argon complexes. European journal of mass spectrometry (Chichester, England), 15(2), 349-59. https://doi.org/10.1255/ejms.990
Gaber, Angela, et al. "Determination of the binding energies in aromatic clusters: resonance-enhanced multi- photon ionization and mass analyzed threshold ionization investigation of the dichlorobenzene-argon complexes." European journal of mass spectrometry (Chichester, England) vol. 15,2 (2009): 349-59. doi: https://doi.org/10.1255/ejms.990
Gaber A, Riese M, Witte F, Grotemeyer J. Determination of the binding energies in aromatic clusters: resonance-enhanced multi- photon ionization and mass analyzed threshold ionization investigation of the dichlorobenzene-argon complexes. Eur J Mass Spectrom (Chichester). 2009;15(2):349-59. doi: 10.1255/ejms.990. PMID: 19423920.
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Patient-matched analysis identifies deregulated networks in prostate cancer to guide personalized therapeutic intervention.

American journal of cancer research

Kumar A, Kasikci Y, Badredine A, Azzag K, Quintyn Ranty ML, Zaidi F, Aragou N, Mazerolles C, Malavaud B, Mendoza-Parra MA, Vandel L, Gronemeyer H.
PMID: 34873462
Am J Cancer Res. 2021 Nov 15;11(11):5299-5318. eCollection 2021.

Prostate cancer (PrCa) is the second most common malignancy in men. More than 50% of advanced prostate cancers display the TMPRSS2-ERG fusion. Despite extensive cancer genome/transcriptome data, little is known about the impact of mutations and altered transcription on...

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Kumar A, Kasikci Y, Badredine A, et al. Patient-matched analysis identifies deregulated networks in prostate cancer to guide personalized therapeutic intervention. Am J Cancer Res. 2021;11(11):5299-5318
Kumar, A., Kasikci, Y., Badredine, A., Azzag, K., Quintyn Ranty, M. L., Zaidi, F., Aragou, N., Mazerolles, C., Malavaud, B., Mendoza-Parra, M. A., Vandel, L., & Gronemeyer, H. (2021). Patient-matched analysis identifies deregulated networks in prostate cancer to guide personalized therapeutic intervention. American journal of cancer research, 11(11), 5299-5318.
Kumar, Akinchan, et al. "Patient-matched analysis identifies deregulated networks in prostate cancer to guide personalized therapeutic intervention." American journal of cancer research vol. 11,11 (2021): 5299-5318.
Kumar A, Kasikci Y, Badredine A, Azzag K, Quintyn Ranty ML, Zaidi F, Aragou N, Mazerolles C, Malavaud B, Mendoza-Parra MA, Vandel L, Gronemeyer H. Patient-matched analysis identifies deregulated networks in prostate cancer to guide personalized therapeutic intervention. Am J Cancer Res. 2021 Nov 15;11(11):5299-5318. eCollection 2021. PMID: 34873462; PMCID: PMC8640800.
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Tutorial: the secrets of time-of flight mass spectrometry revealed.

European journal of mass spectrometry (Chichester, England)

Uphoff A, Grotemeyer J.
PMID: 12939493
Eur J Mass Spectrom (Chichester). 2003;9(3):151-64. doi: 10.1255/ejms.545.

No abstract available.

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Uphoff A, Grotemeyer J. Tutorial: the secrets of time-of flight mass spectrometry revealed. Eur J Mass Spectrom (Chichester). 2003;9(3):151-64doi: 10.1255/ejms.545.
Uphoff, A., & Grotemeyer, J. (2003). Tutorial: the secrets of time-of flight mass spectrometry revealed. European journal of mass spectrometry (Chichester, England), 9(3), 151-64. https://doi.org/10.1255/ejms.545
Uphoff, Andreas, and Grotemeyer, Jürgen. "Tutorial: the secrets of time-of flight mass spectrometry revealed." European journal of mass spectrometry (Chichester, England) vol. 9,3 (2003): 151-64. doi: https://doi.org/10.1255/ejms.545
Uphoff A, Grotemeyer J. Tutorial: the secrets of time-of flight mass spectrometry revealed. Eur J Mass Spectrom (Chichester). 2003;9(3):151-64. doi: 10.1255/ejms.545. PMID: 12939493.
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UV-laser ablation of ionic liquid matrices.

Analytical and bioanalytical chemistry

Hellwig N, Thrun A, Muskat T, Grotemeyer J.
PMID: 19688339
Anal Bioanal Chem. 2009 Dec;395(8):2457-63. doi: 10.1007/s00216-009-3030-3.

Ionic liquid matrices are a new class of matrices used in MALDI mass spectrometry. The ablation process of several ionic liquid matrices was studied by determining the velocity distribution of ablated neutral matrix molecules. This was done by a...

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Hellwig N, Thrun A, Muskat T, et al. UV-laser ablation of ionic liquid matrices. Anal Bioanal Chem. 2009;395(8):2457-63doi: 10.1007/s00216-009-3030-3.
Hellwig, N., Thrun, A., Muskat, T., & Grotemeyer, J. (2009). UV-laser ablation of ionic liquid matrices. Analytical and bioanalytical chemistry, 395(8), 2457-63. https://doi.org/10.1007/s00216-009-3030-3
Hellwig, Nils, et al. "UV-laser ablation of ionic liquid matrices." Analytical and bioanalytical chemistry vol. 395,8 (2009): 2457-63. doi: https://doi.org/10.1007/s00216-009-3030-3
Hellwig N, Thrun A, Muskat T, Grotemeyer J. UV-laser ablation of ionic liquid matrices. Anal Bioanal Chem. 2009 Dec;395(8):2457-63. doi: 10.1007/s00216-009-3030-3. PMID: 19688339.
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Studies of the First Electronically Excited State of 3-Fluoropyridine and Its Ionic Structure by Means of REMPI, Two-Photon MATI, One-Photon VUV-MATI Spectroscopy and Franck-Condon Analysis.

Physical chemistry chemical physics : PCCP

Helle N, Raeker T, Grotemeyer J.
PMID: 35019908
Phys Chem Chem Phys. 2022 Jan 12; doi: 10.1039/d1cp04636e. Epub 2022 Jan 12.

3-Fluoropyridine (3-FP) has been investigated by means of two-photon resonance-enhanced multi photon ionization (REMPI), mass-analyzed threshold ionization (MATI) and one-photon vacuum-ultraviolet (VUV) MATI spectroscopy. The aim was the determination of the effect of

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Helle N, Raeker T, Grotemeyer J. Studies of the First Electronically Excited State of 3-Fluoropyridine and Its Ionic Structure by Means of REMPI, Two-Photon MATI, One-Photon VUV-MATI Spectroscopy and Franck-Condon Analysis. Phys Chem Chem Phys. 2022;doi: 10.1039/d1cp04636e.
Helle, N., Raeker, T., & Grotemeyer, J. (2022). Studies of the First Electronically Excited State of 3-Fluoropyridine and Its Ionic Structure by Means of REMPI, Two-Photon MATI, One-Photon VUV-MATI Spectroscopy and Franck-Condon Analysis. Physical chemistry chemical physics : PCCP, . https://doi.org/10.1039/d1cp04636e
Helle, Niklas, et al. "Studies of the First Electronically Excited State of 3-Fluoropyridine and Its Ionic Structure by Means of REMPI, Two-Photon MATI, One-Photon VUV-MATI Spectroscopy and Franck-Condon Analysis." Physical chemistry chemical physics : PCCP vol. (2022). doi: https://doi.org/10.1039/d1cp04636e
Helle N, Raeker T, Grotemeyer J. Studies of the First Electronically Excited State of 3-Fluoropyridine and Its Ionic Structure by Means of REMPI, Two-Photon MATI, One-Photon VUV-MATI Spectroscopy and Franck-Condon Analysis. Phys Chem Chem Phys. 2022 Jan 12; doi: 10.1039/d1cp04636e. Epub 2022 Jan 12. PMID: 35019908.
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Dual RXR Agonists and RAR Antagonists Based on the Stilbene Retinoid Scaffold.

ACS medicinal chemistry letters

Martínez C, Lieb M, Alvarez S, Rodríguez-Barrios F, Alvarez R, Khanwalkar H, Gronemeyer H, de Lera AR.
PMID: 24900875
ACS Med Chem Lett. 2014 Mar 19;5(5):533-7. doi: 10.1021/ml400521f. eCollection 2014 May 08.

Arotinoids containing a C5,C8-diphenylnaphthalene-2-yl ring linked to a (C3-halogenated) benzoic acid via an ethenyl connector (but not the corresponding naphthamides), which are prepared by Horner-Wadsworth-Emmons reaction of naphthaldehydes and benzylphosphonates, display the rather unusual property of being RXR agonists...

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Martínez C, Lieb M, Alvarez S, et al. Dual RXR Agonists and RAR Antagonists Based on the Stilbene Retinoid Scaffold. ACS Med Chem Lett. 2014;5(5):533-7doi: 10.1021/ml400521f.
Martínez, C., Lieb, M., Alvarez, S., Rodríguez-Barrios, F., Alvarez, R., Khanwalkar, H., Gronemeyer, H., & de Lera, A. R. (2014). Dual RXR Agonists and RAR Antagonists Based on the Stilbene Retinoid Scaffold. ACS medicinal chemistry letters, 5(5), 533-7. https://doi.org/10.1021/ml400521f
Martínez, Claudio, et al. "Dual RXR Agonists and RAR Antagonists Based on the Stilbene Retinoid Scaffold." ACS medicinal chemistry letters vol. 5,5 (2014): 533-7. doi: https://doi.org/10.1021/ml400521f
Martínez C, Lieb M, Alvarez S, Rodríguez-Barrios F, Alvarez R, Khanwalkar H, Gronemeyer H, de Lera AR. Dual RXR Agonists and RAR Antagonists Based on the Stilbene Retinoid Scaffold. ACS Med Chem Lett. 2014 Mar 19;5(5):533-7. doi: 10.1021/ml400521f. eCollection 2014 May 08. PMID: 24900875; PMCID: PMC4027779.
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Photodissociation mass spectra and mass-selected resonant (1+1)-photodissociation spectroscopy of some alkyl iodide radical cations.

European journal of mass spectrometry (Chichester, England)

Schüttig H, Grotemeyer J.
PMID: 22173539
Eur J Mass Spectrom (Chichester). 2011;17(5):465-75. doi: 10.1255/ejms.1150.

Photodissociation (PD) mass spectra and mass selected (1+1)-photodissociation spectra of C(2)H(5)I(+•), C(2)D(5)I(+•),1- C(3)H(7)I(+•), 2-C(3)H(7)I(+•), 1-C(4)H(9)I(+•) and 2- C(4)H(9)I(+•) radical cations were studied within the à ← X~ absorption band. The photodissociation mass spectra within the range 13,600-15,900 cm(-1) (1.68-1.97...

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Schüttig H, Grotemeyer J. Photodissociation mass spectra and mass-selected resonant (1+1)-photodissociation spectroscopy of some alkyl iodide radical cations. Eur J Mass Spectrom (Chichester). 2011;17(5):465-75doi: 10.1255/ejms.1150.
Schüttig, H., & Grotemeyer, J. (2011). Photodissociation mass spectra and mass-selected resonant (1+1)-photodissociation spectroscopy of some alkyl iodide radical cations. European journal of mass spectrometry (Chichester, England), 17(5), 465-75. https://doi.org/10.1255/ejms.1150
Schüttig, Hannes, and Grotemeyer, Jürgen. "Photodissociation mass spectra and mass-selected resonant (1+1)-photodissociation spectroscopy of some alkyl iodide radical cations." European journal of mass spectrometry (Chichester, England) vol. 17,5 (2011): 465-75. doi: https://doi.org/10.1255/ejms.1150
Schüttig H, Grotemeyer J. Photodissociation mass spectra and mass-selected resonant (1+1)-photodissociation spectroscopy of some alkyl iodide radical cations. Eur J Mass Spectrom (Chichester). 2011;17(5):465-75. doi: 10.1255/ejms.1150. PMID: 22173539.
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Antibody performance in ChIP-sequencing assays: From quality scores of public data sets to quantitative certification.

F1000Research

Mendoza-Parra MA, Saravaki V, Cholley PE, Blum M, Billoré B, Gronemeyer H.
PMID: 27335635
F1000Res. 2016 Jan 12;5:54. doi: 10.12688/f1000research.7637.1. eCollection 2016.

We have established a certification system for antibodies to be used in chromatin immunoprecipitation assays coupled to massive parallel sequencing (ChIP-seq). This certification comprises a standardized ChIP procedure and the attribution of a numerical quality control indicator (QCi) to...

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Mendoza-Parra MA, Saravaki V, Cholley PE, et al. Antibody performance in ChIP-sequencing assays: From quality scores of public data sets to quantitative certification. F1000Res. 2016;5:54doi: 10.12688/f1000research.7637.1.
Mendoza-Parra, M. A., Saravaki, V., Cholley, P. E., Blum, M., Billoré, B., & Gronemeyer, H. (2016). Antibody performance in ChIP-sequencing assays: From quality scores of public data sets to quantitative certification. F1000Research, 554. https://doi.org/10.12688/f1000research.7637.1
Mendoza-Parra, Marco-Antonio, et al. "Antibody performance in ChIP-sequencing assays: From quality scores of public data sets to quantitative certification." F1000Research vol. 5 (2016): 54. doi: https://doi.org/10.12688/f1000research.7637.1
Mendoza-Parra MA, Saravaki V, Cholley PE, Blum M, Billoré B, Gronemeyer H. Antibody performance in ChIP-sequencing assays: From quality scores of public data sets to quantitative certification. F1000Res. 2016 Jan 12;5:54. doi: 10.12688/f1000research.7637.1. eCollection 2016. PMID: 27335635; PMCID: PMC4893979.
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Fragmentation studies on metastable diethylaniline derivatives using mass-analyzed ion kinetic energy spectrometry.

European journal of mass spectrometry (Chichester, England)

Seulen S, Grotemeyer J.
PMID: 29096543
Eur J Mass Spectrom (Chichester). 2018 Feb;24(1):12-22. doi: 10.1177/1469066717740113. Epub 2017 Nov 03.

It is well known that small substituted aromatic amines lose their substituents after electron ionization in a multistep fragmentation mechanism. In this contribution, the fragmentation reactions of N,N-diethyl-aniline and different methyl-substituted N,N-diethyl-methyl-aniline isomers are investigated with respect to the...

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Seulen S, Grotemeyer J. Fragmentation studies on metastable diethylaniline derivatives using mass-analyzed ion kinetic energy spectrometry. Eur J Mass Spectrom (Chichester). 2017;24(1):12-22doi: 10.1177/1469066717740113.
Seulen, S., & Grotemeyer, J. (2018). Fragmentation studies on metastable diethylaniline derivatives using mass-analyzed ion kinetic energy spectrometry. European journal of mass spectrometry (Chichester, England), 24(1), 12-22. https://doi.org/10.1177/1469066717740113
Seulen, Sarah, and Grotemeyer, Jürgen. "Fragmentation studies on metastable diethylaniline derivatives using mass-analyzed ion kinetic energy spectrometry." European journal of mass spectrometry (Chichester, England) vol. 24,1 (2018): 12-22. doi: https://doi.org/10.1177/1469066717740113
Seulen S, Grotemeyer J. Fragmentation studies on metastable diethylaniline derivatives using mass-analyzed ion kinetic energy spectrometry. Eur J Mass Spectrom (Chichester). 2018 Feb;24(1):12-22. doi: 10.1177/1469066717740113. Epub 2017 Nov 03. PMID: 29096543.
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Showing 25 to 36 of 65 entries