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Some Memories are Odder than Others: Judgments of Episodic Oddity Violate Known Decision Rules.

Journal of memory and language

O'Connor AR, Guhl EN, Cox JC, Dobbins IG.
PMID: 22833695
J Mem Lang. 2011 May;64(4):299-315. doi: 10.1016/j.jml.2011.02.001.

Current decision models of recognition memory are based almost entirely on one paradigm, single item old/new judgments accompanied by confidence ratings. This task results in receiver operating characteristics (ROCs) that are well fit by both signal-detection and dual-process models....

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O'Connor AR, Guhl EN, Cox JC, et al. Some Memories are Odder than Others: Judgments of Episodic Oddity Violate Known Decision Rules. J Mem Lang. 2011;64(4):299-315doi: 10.1016/j.jml.2011.02.001.
O'Connor, A. R., Guhl, E. N., Cox, J. C., & Dobbins, I. G. (2011). Some Memories are Odder than Others: Judgments of Episodic Oddity Violate Known Decision Rules. Journal of memory and language, 64(4), 299-315. https://doi.org/10.1016/j.jml.2011.02.001
O'Connor, Akira R, et al. "Some Memories are Odder than Others: Judgments of Episodic Oddity Violate Known Decision Rules." Journal of memory and language vol. 64,4 (2011): 299-315. doi: https://doi.org/10.1016/j.jml.2011.02.001
O'Connor AR, Guhl EN, Cox JC, Dobbins IG. Some Memories are Odder than Others: Judgments of Episodic Oddity Violate Known Decision Rules. J Mem Lang. 2011 May;64(4):299-315. doi: 10.1016/j.jml.2011.02.001. PMID: 22833695; PMCID: PMC3402237.
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Synthetic DNA spike-ins (SDSIs) enable sample tracking and detection of inter-sample contamination in SARS-CoV-2 sequencing workflows.

Nature microbiology

Lagerborg KA, Normandin E, Bauer MR, Adams G, Figueroa K, Loreth C, Gladden-Young A, Shaw BM, Pearlman LR, Berenzy D, Dewey HB, Kales S, Dobbins ST, Shenoy ES, Hooper D, Pierce VM, Zachary KC, Park DJ, MacInnis BL, Tewhey R, Lemieux JE, Sabeti PC, Reilly SK, Siddle KJ.
PMID: 34907347
Nat Microbiol. 2022 Jan;7(1):108-119. doi: 10.1038/s41564-021-01019-2. Epub 2021 Dec 14.

The global spread and continued evolution of SARS-CoV-2 has driven an unprecedented surge in viral genomic surveillance. Amplicon-based sequencing methods provide a sensitive, low-cost and rapid approach but suffer a high potential for contamination, which can undermine laboratory processes...

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Lagerborg KA, Normandin E, Bauer MR, et al. Synthetic DNA spike-ins (SDSIs) enable sample tracking and detection of inter-sample contamination in SARS-CoV-2 sequencing workflows. Nat Microbiol. 2021;7(1):108-119doi: 10.1038/s41564-021-01019-2.
Lagerborg, K. A., Normandin, E., Bauer, M. R., Adams, G., Figueroa, K., Loreth, C., Gladden-Young, A., Shaw, B. M., Pearlman, L. R., Berenzy, D., Dewey, H. B., Kales, S., Dobbins, S. T., Shenoy, E. S., Hooper, D., Pierce, V. M., Zachary, K. C., Park, D. J., MacInnis, B. L., Tewhey, R., Lemieux, J. E., Sabeti, P. C., Reilly, S. K., & Siddle, K. J. (2022). Synthetic DNA spike-ins (SDSIs) enable sample tracking and detection of inter-sample contamination in SARS-CoV-2 sequencing workflows. Nature microbiology, 7(1), 108-119. https://doi.org/10.1038/s41564-021-01019-2
Lagerborg, Kim A, et al. "Synthetic DNA spike-ins (SDSIs) enable sample tracking and detection of inter-sample contamination in SARS-CoV-2 sequencing workflows." Nature microbiology vol. 7,1 (2022): 108-119. doi: https://doi.org/10.1038/s41564-021-01019-2
Lagerborg KA, Normandin E, Bauer MR, Adams G, Figueroa K, Loreth C, Gladden-Young A, Shaw BM, Pearlman LR, Berenzy D, Dewey HB, Kales S, Dobbins ST, Shenoy ES, Hooper D, Pierce VM, Zachary KC, Park DJ, MacInnis BL, Tewhey R, Lemieux JE, Sabeti PC, Reilly SK, Siddle KJ. Synthetic DNA spike-ins (SDSIs) enable sample tracking and detection of inter-sample contamination in SARS-CoV-2 sequencing workflows. Nat Microbiol. 2022 Jan;7(1):108-119. doi: 10.1038/s41564-021-01019-2. Epub 2021 Dec 14. PMID: 34907347.
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Wavelet methods reveal big cat activity patterns and synchrony of activity with preys.

Integrative zoology

Qi J, Holyoak M, Dobbins MT, Huang C, Li Q, She W, Ning Y, Sun Q, Jiang G, Wang X.
PMID: 33560554
Integr Zool. 2021 Feb 09; doi: 10.1111/1749-4877.12526. Epub 2021 Feb 09.

Appropriate temporal and spatial scales are important prerequisites for obtaining reliable results in studies of wildlife activity patterns and interspecific interactions. The spread of camera-trap technology has increased interest in and feasibility of studying the activity patterns and interspecific...

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Qi J, Holyoak M, Dobbins MT, et al. Wavelet methods reveal big cat activity patterns and synchrony of activity with preys. Integr Zool. 2021;doi: 10.1111/1749-4877.12526.
Qi, J., Holyoak, M., Dobbins, M. T., Huang, C., Li, Q., She, W., Ning, Y., Sun, Q., Jiang, G., & Wang, X. (2021). Wavelet methods reveal big cat activity patterns and synchrony of activity with preys. Integrative zoology, . https://doi.org/10.1111/1749-4877.12526
Qi, Jinzhe, et al. "Wavelet methods reveal big cat activity patterns and synchrony of activity with preys." Integrative zoology vol. (2021). doi: https://doi.org/10.1111/1749-4877.12526
Qi J, Holyoak M, Dobbins MT, Huang C, Li Q, She W, Ning Y, Sun Q, Jiang G, Wang X. Wavelet methods reveal big cat activity patterns and synchrony of activity with preys. Integr Zool. 2021 Feb 09; doi: 10.1111/1749-4877.12526. Epub 2021 Feb 09. PMID: 33560554.
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Impulse response and Modulation Transfer Function analysis for Shift-And-Add and Back Projection image reconstruction algorithms in Digital Breast Tomosynthesis (DBT).

International journal of functional informatics and personalised medicine

Chen Y, Lo JY, Dobbins JT.
PMID: 23935707
Int J Funct Inform Personal Med. 2008;1(2):189-204. doi: 10.1504/IJFIPM.2008.020187.

Breast cancer is second only to lung cancer as the leading cause of non-preventable cancer death in women. Digital Breast Tomosynthesis (DBT) is a promising technique to improve early breast cancer detection. In this paper, we present the impulse...

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Chen Y, Lo JY, Dobbins JT. Impulse response and Modulation Transfer Function analysis for Shift-And-Add and Back Projection image reconstruction algorithms in Digital Breast Tomosynthesis (DBT). Int J Funct Inform Personal Med. 2008;1(2):189-204doi: 10.1504/IJFIPM.2008.020187.
Chen, Y., Lo, J. Y., & Dobbins, J. T. (2008). Impulse response and Modulation Transfer Function analysis for Shift-And-Add and Back Projection image reconstruction algorithms in Digital Breast Tomosynthesis (DBT). International journal of functional informatics and personalised medicine, 1(2), 189-204. https://doi.org/10.1504/IJFIPM.2008.020187
Chen, Ying, et al. "Impulse response and Modulation Transfer Function analysis for Shift-And-Add and Back Projection image reconstruction algorithms in Digital Breast Tomosynthesis (DBT)." International journal of functional informatics and personalised medicine vol. 1,2 (2008): 189-204. doi: https://doi.org/10.1504/IJFIPM.2008.020187
Chen Y, Lo JY, Dobbins JT. Impulse response and Modulation Transfer Function analysis for Shift-And-Add and Back Projection image reconstruction algorithms in Digital Breast Tomosynthesis (DBT). Int J Funct Inform Personal Med. 2008;1(2):189-204. doi: 10.1504/IJFIPM.2008.020187. PMID: 23935707; PMCID: PMC3738212.
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Erratum: A new GWAS and meta-analysis with 1000Genomes imputation identifies novel risk variants for colorectal cancer.

Scientific reports

Al-Tassan NA, Whiffin N, Hosking FJ, Palles C, Farrington SM, Dobbins SE, Harris R, Gorman M, Tenesa A, Meyer BF, Wakil SM, Kinnersley B, Campbell H, Martin L, Smith CG, Idziaszczyk S, Barclay E, Maughan TS, Kaplan R, Kerr R, Kerr D, Buchanan DD, Win AK, Hopper J, Jenkins M, Lindor NM, Newcomb PA, Gallinger S, Conti D, Schumacher F, Casey G, Dunlop MG, Tomlinson IP, Cheadle JP, Houlston RS.
PMID: 26237130
Sci Rep. 2015 Aug 03;5:12372. doi: 10.1038/srep12372.

No abstract available.

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Al-Tassan NA, Whiffin N, Hosking FJ, et al. Erratum: A new GWAS and meta-analysis with 1000Genomes imputation identifies novel risk variants for colorectal cancer. Sci Rep. 2015;5:12372doi: 10.1038/srep12372.
Al-Tassan, N. A., Whiffin, N., Hosking, F. J., Palles, C., Farrington, S. M., Dobbins, S. E., Harris, R., Gorman, M., Tenesa, A., Meyer, B. F., Wakil, S. M., Kinnersley, B., Campbell, H., Martin, L., Smith, C. G., Idziaszczyk, S., Barclay, E., Maughan, T. S., Kaplan, R., Kerr, R., Kerr, D., Buchanan, D. D., Win, A. K., Hopper, J., Jenkins, M., Lindor, N. M., Newcomb, P. A., Gallinger, S., Conti, D., Schumacher, F., Casey, G., Dunlop, M. G., Tomlinson, I. P., Cheadle, J. P., & Houlston, R. S. (2015). Erratum: A new GWAS and meta-analysis with 1000Genomes imputation identifies novel risk variants for colorectal cancer. Scientific reports, 512372. https://doi.org/10.1038/srep12372
Al-Tassan, Nada A, et al. "Erratum: A new GWAS and meta-analysis with 1000Genomes imputation identifies novel risk variants for colorectal cancer." Scientific reports vol. 5 (2015): 12372. doi: https://doi.org/10.1038/srep12372
Al-Tassan NA, Whiffin N, Hosking FJ, Palles C, Farrington SM, Dobbins SE, Harris R, Gorman M, Tenesa A, Meyer BF, Wakil SM, Kinnersley B, Campbell H, Martin L, Smith CG, Idziaszczyk S, Barclay E, Maughan TS, Kaplan R, Kerr R, Kerr D, Buchanan DD, Win AK, Hopper J, Jenkins M, Lindor NM, Newcomb PA, Gallinger S, Conti D, Schumacher F, Casey G, Dunlop MG, Tomlinson IP, Cheadle JP, Houlston RS. Erratum: A new GWAS and meta-analysis with 1000Genomes imputation identifies novel risk variants for colorectal cancer. Sci Rep. 2015 Aug 03;5:12372. doi: 10.1038/srep12372. PMID: 26237130; PMCID: PMC4523102.
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Proposed changes to the American Association of Physicists in Medicine governance.

Journal of applied clinical medical physics

Pawlicki T, Ayers RG, Brock KK, Clements JB, Curran BH, Dobbins JT, Samei E, Adams E, Martin MC, Schober L.
PMID: 28681449
J Appl Clin Med Phys. 2017 Jul;18(4):4-6. doi: 10.1002/acm2.12124.

No abstract available.

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Pawlicki T, Ayers RG, Brock KK, et al. Proposed changes to the American Association of Physicists in Medicine governance. J Appl Clin Med Phys. 2017;18(4):4-6doi: 10.1002/acm2.12124.
Pawlicki, T., Ayers, R. G., Brock, K. K., Clements, J. B., Curran, B. H., Dobbins, J. T., Samei, E., Adams, E., Martin, M. C., & Schober, L. (2017). Proposed changes to the American Association of Physicists in Medicine governance. Journal of applied clinical medical physics, 18(4), 4-6. https://doi.org/10.1002/acm2.12124
Pawlicki, Todd, et al. "Proposed changes to the American Association of Physicists in Medicine governance." Journal of applied clinical medical physics vol. 18,4 (2017): 4-6. doi: https://doi.org/10.1002/acm2.12124
Pawlicki T, Ayers RG, Brock KK, Clements JB, Curran BH, Dobbins JT, Samei E, Adams E, Martin MC, Schober L. Proposed changes to the American Association of Physicists in Medicine governance. J Appl Clin Med Phys. 2017 Jul;18(4):4-6. doi: 10.1002/acm2.12124. PMID: 28681449; PMCID: PMC5874933.
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Exploring glycosuria as a mechanism for weight and fat mass reduction. A pilot study with remogliflozin etabonate and sergliflozin etabonate in healthy obese subjects.

Journal of clinical & translational endocrinology

Napolitano A, Miller S, Murgatroyd PR, Hussey E, Dobbins RL, Bullmore ET, Nunez DJR.
PMID: 29235586
J Clin Transl Endocrinol. 2013 Dec 11;1(1):e3-e8. doi: 10.1016/j.jcte.2013.12.001. eCollection 2014 Mar.

Inhibitors of sodium-dependent glucose co-transporter 2 (SGLT2) increase glucose excretion in the urine and improve blood glucose in Type 2 diabetes mellitus. Glycosuria provides an energy and osmotic drain that could alter body composition. We therefore conducted a pilot...

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Napolitano A, Miller S, Murgatroyd PR, et al. Exploring glycosuria as a mechanism for weight and fat mass reduction. A pilot study with remogliflozin etabonate and sergliflozin etabonate in healthy obese subjects. J Clin Transl Endocrinol. 2013;1(1):e3-e8doi: 10.1016/j.jcte.2013.12.001.
Napolitano, A., Miller, S., Murgatroyd, P. R., Hussey, E., Dobbins, R. L., Bullmore, E. T., & Nunez, D. J. R. (2014). Exploring glycosuria as a mechanism for weight and fat mass reduction. A pilot study with remogliflozin etabonate and sergliflozin etabonate in healthy obese subjects. Journal of clinical & translational endocrinology, 1(1), e3-e8. https://doi.org/10.1016/j.jcte.2013.12.001
Napolitano, Antonella, et al. "Exploring glycosuria as a mechanism for weight and fat mass reduction. A pilot study with remogliflozin etabonate and sergliflozin etabonate in healthy obese subjects." Journal of clinical & translational endocrinology vol. 1,1 (2014): e3-e8. doi: https://doi.org/10.1016/j.jcte.2013.12.001
Napolitano A, Miller S, Murgatroyd PR, Hussey E, Dobbins RL, Bullmore ET, Nunez DJR. Exploring glycosuria as a mechanism for weight and fat mass reduction. A pilot study with remogliflozin etabonate and sergliflozin etabonate in healthy obese subjects. J Clin Transl Endocrinol. 2013 Dec 11;1(1):e3-e8. doi: 10.1016/j.jcte.2013.12.001. eCollection 2014 Mar. PMID: 29235586; PMCID: PMC5685025.
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Partitioning the sources of recognition confidence: The role of individual differences.

Psychonomic bulletin & review

Kantner J, Dobbins IG.
PMID: 30924058
Psychon Bull Rev. 2019 Aug;26(4):1317-1324. doi: 10.3758/s13423-019-01586-w.

Confidence ratings during old-new recognition memory tasks are thought to index the strength of memory evidence elicited by test probes. However, various subject-specific factors may also influence reported confidence, including perceived self-efficacy and idiosyncratic interpretation of the confidence scale....

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Kantner J, Dobbins IG. Partitioning the sources of recognition confidence: The role of individual differences. Psychon Bull Rev. 2019;26(4):1317-1324doi: 10.3758/s13423-019-01586-w.
Kantner, J., & Dobbins, I. G. (2019). Partitioning the sources of recognition confidence: The role of individual differences. Psychonomic bulletin & review, 26(4), 1317-1324. https://doi.org/10.3758/s13423-019-01586-w
Kantner, Justin, and Dobbins, Ian G. "Partitioning the sources of recognition confidence: The role of individual differences." Psychonomic bulletin & review vol. 26,4 (2019): 1317-1324. doi: https://doi.org/10.3758/s13423-019-01586-w
Kantner J, Dobbins IG. Partitioning the sources of recognition confidence: The role of individual differences. Psychon Bull Rev. 2019 Aug;26(4):1317-1324. doi: 10.3758/s13423-019-01586-w. PMID: 30924058.
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Incorporating higher order thinking and deep learning in a large, lecture-based human physiology course: can we do it?.

Advances in physiology education

Hobbins JO, Murrant CL, Snook LA, Tishinsky JM, Ritchie KL.
PMID: 33079565
Adv Physiol Educ. 2020 Dec 01;44(4):670-678. doi: 10.1152/advan.00126.2019.

Large classes taught with didactic lectures and assessed with multiple-choice tests are commonly reported to promote lower order (LO) thinking and a surface approach (SA) to learning. Using a case study design, we hypothesized that incorporating instructional scaffolding of...

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Hobbins JO, Murrant CL, Snook LA, et al. Incorporating higher order thinking and deep learning in a large, lecture-based human physiology course: can we do it?. Adv Physiol Educ. 2020;44(4):670-678doi: 10.1152/advan.00126.2019.
Hobbins, J. O., Murrant, C. L., Snook, L. A., Tishinsky, J. M., & Ritchie, K. L. (2020). Incorporating higher order thinking and deep learning in a large, lecture-based human physiology course: can we do it?. Advances in physiology education, 44(4), 670-678. https://doi.org/10.1152/advan.00126.2019
Hobbins, Justine O, et al. "Incorporating higher order thinking and deep learning in a large, lecture-based human physiology course: can we do it?." Advances in physiology education vol. 44,4 (2020): 670-678. doi: https://doi.org/10.1152/advan.00126.2019
Hobbins JO, Murrant CL, Snook LA, Tishinsky JM, Ritchie KL. Incorporating higher order thinking and deep learning in a large, lecture-based human physiology course: can we do it?. Adv Physiol Educ. 2020 Dec 01;44(4):670-678. doi: 10.1152/advan.00126.2019. PMID: 33079565.
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Shear yielding of amorphous glassy solids: effect of temperature and strain rate.

Physical review. E, Statistical, nonlinear, and soft matter physics

Rottler J, Robbins MO.
PMID: 12935150
Phys Rev E Stat Nonlin Soft Matter Phys. 2003 Jul;68(1):011507. doi: 10.1103/PhysRevE.68.011507. Epub 2003 Jul 25.

We study shear yielding and steady state flow of glassy materials with molecular dynamics simulations of two standard models: amorphous polymers and bidisperse Lennard-Jones glasses. For a fixed strain rate, the maximum shear yield stress and the steady state...

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Rottler J, Robbins MO. Shear yielding of amorphous glassy solids: effect of temperature and strain rate. Phys Rev E Stat Nonlin Soft Matter Phys. 2003;68(1):011507doi: 10.1103/PhysRevE.68.011507.
Rottler, J., & Robbins, M. O. (2003). Shear yielding of amorphous glassy solids: effect of temperature and strain rate. Physical review. E, Statistical, nonlinear, and soft matter physics, 68(1), 011507. https://doi.org/10.1103/PhysRevE.68.011507
Rottler, Jörg, and Robbins, Mark O. "Shear yielding of amorphous glassy solids: effect of temperature and strain rate." Physical review. E, Statistical, nonlinear, and soft matter physics vol. 68,1 (2003): 011507. doi: https://doi.org/10.1103/PhysRevE.68.011507
Rottler J, Robbins MO. Shear yielding of amorphous glassy solids: effect of temperature and strain rate. Phys Rev E Stat Nonlin Soft Matter Phys. 2003 Jul;68(1):011507. doi: 10.1103/PhysRevE.68.011507. Epub 2003 Jul 25. PMID: 12935150.
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Simple microscopic theory of Amontons's laws for static friction.

Physical review letters

Müser MH, Wenning L, Robbins MO.
PMID: 11178067
Phys Rev Lett. 2001 Feb 12;86(7):1295-8. doi: 10.1103/PhysRevLett.86.1295.

A microscopic theory for the ubiquitous phenomenon of static friction is presented. Interactions between two surfaces are modeled by an energy penalty that increases exponentially with the degree of surface overlap. The resulting static friction is proportional to load,...

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Müser MH, Wenning L, Robbins MO. Simple microscopic theory of Amontons's laws for static friction. Phys Rev Lett. 2001;86(7):1295-8doi: 10.1103/PhysRevLett.86.1295.
Müser, M. H., Wenning, L., & Robbins, M. O. (2001). Simple microscopic theory of Amontons's laws for static friction. Physical review letters, 86(7), 1295-8. https://doi.org/10.1103/PhysRevLett.86.1295
Müser, M H, et al. "Simple microscopic theory of Amontons's laws for static friction." Physical review letters vol. 86,7 (2001): 1295-8. doi: https://doi.org/10.1103/PhysRevLett.86.1295
Müser MH, Wenning L, Robbins MO. Simple microscopic theory of Amontons's laws for static friction. Phys Rev Lett. 2001 Feb 12;86(7):1295-8. doi: 10.1103/PhysRevLett.86.1295. PMID: 11178067.
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Further Observations on the Specificity of Hypoxanthine for Phycomyces.

Proceedings of the National Academy of Sciences of the United States of America

Robbins WJ.
PMID: 16578074
Proc Natl Acad Sci U S A. 1943 Jul;29(7):201-2. doi: 10.1073/pnas.29.7.201.

No abstract available.

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Robbins WJ. Further Observations on the Specificity of Hypoxanthine for Phycomyces. Proc Natl Acad Sci U S A. 1943;29(7):201-2doi: 10.1073/pnas.29.7.201.
Robbins, W. J. (1943). Further Observations on the Specificity of Hypoxanthine for Phycomyces. Proceedings of the National Academy of Sciences of the United States of America, 29(7), 201-2. https://doi.org/10.1073/pnas.29.7.201
Robbins, W J. "Further Observations on the Specificity of Hypoxanthine for Phycomyces." Proceedings of the National Academy of Sciences of the United States of America vol. 29,7 (1943): 201-2. doi: https://doi.org/10.1073/pnas.29.7.201
Robbins WJ. Further Observations on the Specificity of Hypoxanthine for Phycomyces. Proc Natl Acad Sci U S A. 1943 Jul;29(7):201-2. doi: 10.1073/pnas.29.7.201. PMID: 16578074; PMCID: PMC1078589.
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