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Solvation Structure and Thermodynamic Mapping (SSTMap): An Open-Source, Flexible Package for the Analysis of Water in Molecular Dynamics Trajectories.

Journal of chemical theory and computation

Haider K, Cruz A, Ramsey S, Gilson MK, Kurtzman T.
PMID: 29161510
J Chem Theory Comput. 2018 Jan 09;14(1):418-425. doi: 10.1021/acs.jctc.7b00592. Epub 2017 Dec 08.

We have developed SSTMap, a software package for mapping structural and thermodynamic water properties in molecular dynamics trajectories. The package introduces automated analysis and mapping of local measures of frustration and enhancement of water structure. The thermodynamic calculations are...

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Haider K, Cruz A, Ramsey S, et al. Solvation Structure and Thermodynamic Mapping (SSTMap): An Open-Source, Flexible Package for the Analysis of Water in Molecular Dynamics Trajectories. J Chem Theory Comput. 2017;14(1):418-425doi: 10.1021/acs.jctc.7b00592.
Haider, K., Cruz, A., Ramsey, S., Gilson, M. K., & Kurtzman, T. (2018). Solvation Structure and Thermodynamic Mapping (SSTMap): An Open-Source, Flexible Package for the Analysis of Water in Molecular Dynamics Trajectories. Journal of chemical theory and computation, 14(1), 418-425. https://doi.org/10.1021/acs.jctc.7b00592
Haider, Kamran, et al. "Solvation Structure and Thermodynamic Mapping (SSTMap): An Open-Source, Flexible Package for the Analysis of Water in Molecular Dynamics Trajectories." Journal of chemical theory and computation vol. 14,1 (2018): 418-425. doi: https://doi.org/10.1021/acs.jctc.7b00592
Haider K, Cruz A, Ramsey S, Gilson MK, Kurtzman T. Solvation Structure and Thermodynamic Mapping (SSTMap): An Open-Source, Flexible Package for the Analysis of Water in Molecular Dynamics Trajectories. J Chem Theory Comput. 2018 Jan 09;14(1):418-425. doi: 10.1021/acs.jctc.7b00592. Epub 2017 Dec 08. PMID: 29161510; PMCID: PMC5760325.
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HOMO-LUMO energy gap control in platinum(II) biphenyl complexes containing 2,2'-bipyridine ligands.

Dalton transactions (Cambridge, England : 2003)

Rillema DP, Stoyanov SR, Cruz AJ, Nguyen H, Moore C, Huang W, Siam K, Jehan A, KomReddy V.
PMID: 26369314
Dalton Trans. 2015 Oct 21;44(39):17075-90. doi: 10.1039/c5dt01891a. Epub 2015 Sep 15.

A series of platinum(ii) biphenyl 2,2'-bipyridine complexes containing electron-donating and electron-withdrawing moieties on the 4 and 4' positions of the bipyridine ligand exhibit emission from excited states in the 600 nm region of the spectrum upon excitation in the...

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Rillema DP, Stoyanov SR, Cruz AJ, et al. HOMO-LUMO energy gap control in platinum(II) biphenyl complexes containing 2,2'-bipyridine ligands. Dalton Trans. 2015;44(39):17075-90doi: 10.1039/c5dt01891a.
Rillema, D. P., Stoyanov, S. R., Cruz, A. J., Nguyen, H., Moore, C., Huang, W., Siam, K., Jehan, A., & KomReddy, V. (2015). HOMO-LUMO energy gap control in platinum(II) biphenyl complexes containing 2,2'-bipyridine ligands. Dalton transactions (Cambridge, England : 2003), 44(39), 17075-90. https://doi.org/10.1039/c5dt01891a
Rillema, D Paul, et al. "HOMO-LUMO energy gap control in platinum(II) biphenyl complexes containing 2,2'-bipyridine ligands." Dalton transactions (Cambridge, England : 2003) vol. 44,39 (2015): 17075-90. doi: https://doi.org/10.1039/c5dt01891a
Rillema DP, Stoyanov SR, Cruz AJ, Nguyen H, Moore C, Huang W, Siam K, Jehan A, KomReddy V. HOMO-LUMO energy gap control in platinum(II) biphenyl complexes containing 2,2'-bipyridine ligands. Dalton Trans. 2015 Oct 21;44(39):17075-90. doi: 10.1039/c5dt01891a. Epub 2015 Sep 15. PMID: 26369314.
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The impact of a program for control of asthma in a low-income setting.

The World Allergy Organization journal

Cruz AA, Souza-Machado A, Franco R, Souza-Machado C, Ponte EV, Moura Santos P, Barreto ML.
PMID: 23268428
World Allergy Organ J. 2010 Apr;3(4):167-74. doi: 10.1097/WOX.0b013e3181dc3383. Epub 2010 Apr 23.

The prevalence of asthma is increasing in developing countries and the burden of uncontrolled asthma affects patients, families, and the health system. This is to summarize, evaluate, and discuss previous reports on the impact of a targeted and comprehensive...

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Cruz AA, Souza-Machado A, Franco R, et al. The impact of a program for control of asthma in a low-income setting. World Allergy Organ J. 2010;3(4):167-74doi: 10.1097/WOX.0b013e3181dc3383.
Cruz, A. A., Souza-Machado, A., Franco, R., Souza-Machado, C., Ponte, E. V., Moura Santos, P., & Barreto, M. L. (2010). The impact of a program for control of asthma in a low-income setting. The World Allergy Organization journal, 3(4), 167-74. https://doi.org/10.1097/WOX.0b013e3181dc3383
Cruz, Alvaro A, et al. "The impact of a program for control of asthma in a low-income setting." The World Allergy Organization journal vol. 3,4 (2010): 167-74. doi: https://doi.org/10.1097/WOX.0b013e3181dc3383
Cruz AA, Souza-Machado A, Franco R, Souza-Machado C, Ponte EV, Moura Santos P, Barreto ML. The impact of a program for control of asthma in a low-income setting. World Allergy Organ J. 2010 Apr;3(4):167-74. doi: 10.1097/WOX.0b013e3181dc3383. Epub 2010 Apr 23. PMID: 23268428; PMCID: PMC3488909.
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Corrigendum to "Smart food policy for healthy food labeling: Leading with taste, not healthiness, to shift consumption and enjoyment of healthy foods" [Prev. Med. 119 (2019) 7-13].

Preventive medicine

Turnwald BP, Crum AJ.
PMID: 30826012
Prev Med. 2019 Jun;123:344. doi: 10.1016/j.ypmed.2019.02.024. Epub 2019 Feb 28.

No abstract available.

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Turnwald BP, Crum AJ. Corrigendum to "Smart food policy for healthy food labeling: Leading with taste, not healthiness, to shift consumption and enjoyment of healthy foods" [Prev. Med. 119 (2019) 7-13]. Prev Med. 2019;123:344doi: 10.1016/j.ypmed.2019.02.024.
Turnwald, B. P., & Crum, A. J. (2019). Corrigendum to "Smart food policy for healthy food labeling: Leading with taste, not healthiness, to shift consumption and enjoyment of healthy foods" [Prev. Med. 119 (2019) 7-13]. Preventive medicine, 123344. https://doi.org/10.1016/j.ypmed.2019.02.024
Turnwald, Bradley P, and Crum, Alia J. "Corrigendum to "Smart food policy for healthy food labeling: Leading with taste, not healthiness, to shift consumption and enjoyment of healthy foods" [Prev. Med. 119 (2019) 7-13]." Preventive medicine vol. 123 (2019): 344. doi: https://doi.org/10.1016/j.ypmed.2019.02.024
Turnwald BP, Crum AJ. Corrigendum to "Smart food policy for healthy food labeling: Leading with taste, not healthiness, to shift consumption and enjoyment of healthy foods" [Prev. Med. 119 (2019) 7-13]. Prev Med. 2019 Jun;123:344. doi: 10.1016/j.ypmed.2019.02.024. Epub 2019 Feb 28. PMID: 30826012.
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[An uncommon cause of lower limb oedema - Case report].

Revista portuguesa de cirurgia cardio-toracica e vascular : orgao oficial da Sociedade Portuguesa de Cirurgia Cardio-Toracica e Vascular

Vidoedo J, Cruz A, A Pinto J, Maia M, Vasconcelos J.
PMID: 27989032
Rev Port Cir Cardiotorac Vasc. 2015 Jul-Sep;22(3):175-178.

The authors report the clinical case of a 50-year-old man who was observed in the emergency department because of a one week long, painless left lower limb swelling. At presentation, a gross edema was evident and peripheral pulses were...

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Vidoedo J, Cruz A, A Pinto J, et al. Causa Incomum De Edema Do Membro Inferior - Caso Clínico. [An uncommon cause of lower limb oedema - Case report]. Rev Port Cir Cardiotorac Vasc. 2015;22(3):175-178
Vidoedo, J., Cruz, A., A Pinto, J., Maia, M., & Vasconcelos, J. (2015). Causa Incomum De Edema Do Membro Inferior - Caso Clínico. [An uncommon cause of lower limb oedema - Case report]. Revista portuguesa de cirurgia cardio-toracica e vascular : orgao oficial da Sociedade Portuguesa de Cirurgia Cardio-Toracica e Vascular, 22(3), 175-178.
Vidoedo, José, et al. "Causa Incomum De Edema Do Membro Inferior - Caso Clínico." [An uncommon cause of lower limb oedema - Case report]. Revista portuguesa de cirurgia cardio-toracica e vascular : orgao oficial da Sociedade Portuguesa de Cirurgia Cardio-Toracica e Vascular vol. 22,3 (2015): 175-178.
Vidoedo J, Cruz A, A Pinto J, Maia M, Vasconcelos J. Causa Incomum De Edema Do Membro Inferior - Caso Clínico. [An uncommon cause of lower limb oedema - Case report]. Rev Port Cir Cardiotorac Vasc. 2015 Jul-Sep;22(3):175-178. Portuguese. PMID: 27989032.
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Tibial Eminence Fracture Repair With Double Hewson Suture Passer Technique.

Arthroscopy techniques

DeFroda SF, Hodax JD, Shah KN, Cruz AI.
PMID: 29354428
Arthrosc Tech. 2017 Aug 14;6(4):e1275-e1279. doi: 10.1016/j.eats.2017.05.005. eCollection 2017 Aug.

Displaced tibial eminence fractures are commonly encountered in pediatric patients and are often considered to be functionally equivalent to an anterior cruciate ligament (ACL) rupture. While a variety of techniques are available for fixation of this injury, we describe...

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DeFroda SF, Hodax JD, Shah KN, et al. Tibial Eminence Fracture Repair With Double Hewson Suture Passer Technique. Arthrosc Tech. 2017;6(4):e1275-e1279doi: 10.1016/j.eats.2017.05.005.
DeFroda, S. F., Hodax, J. D., Shah, K. N., & Cruz, A. I. (2017). Tibial Eminence Fracture Repair With Double Hewson Suture Passer Technique. Arthroscopy techniques, 6(4), e1275-e1279. https://doi.org/10.1016/j.eats.2017.05.005
DeFroda, Steven F, et al. "Tibial Eminence Fracture Repair With Double Hewson Suture Passer Technique." Arthroscopy techniques vol. 6,4 (2017): e1275-e1279. doi: https://doi.org/10.1016/j.eats.2017.05.005
DeFroda SF, Hodax JD, Shah KN, Cruz AI. Tibial Eminence Fracture Repair With Double Hewson Suture Passer Technique. Arthrosc Tech. 2017 Aug 14;6(4):e1275-e1279. doi: 10.1016/j.eats.2017.05.005. eCollection 2017 Aug. PMID: 29354428; PMCID: PMC5622207.
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Antibacterial Activity of Three Extra Virgin Olive Oils of the Campania Region, Southern Italy, Related to Their Polyphenol Content and Composition.

Microorganisms

Nazzaro F, Fratianni F, Cozzolino R, Martignetti A, Malorni L, De Feo V, Cruz AG, d'Acierno A.
PMID: 31491985
Microorganisms. 2019 Sep 05;7(9). doi: 10.3390/microorganisms7090321.

Production of extra virgin olive oil (EVOO) represents an important element for the economy of Southern Italy. Therefore, EVOO is recognized as a food with noticeable biological effects. Our study aimed to evaluate the antimicrobial activity exhibited by the...

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Nazzaro F, Fratianni F, Cozzolino R, et al. Antibacterial Activity of Three Extra Virgin Olive Oils of the Campania Region, Southern Italy, Related to Their Polyphenol Content and Composition. Microorganisms. 2019;7(9)doi: 10.3390/microorganisms7090321.
Nazzaro, F., Fratianni, F., Cozzolino, R., Martignetti, A., Malorni, L., De Feo, V., Cruz, A. G., & d'Acierno, A. (2019). Antibacterial Activity of Three Extra Virgin Olive Oils of the Campania Region, Southern Italy, Related to Their Polyphenol Content and Composition. Microorganisms, 7(9), . https://doi.org/10.3390/microorganisms7090321
Nazzaro, Filomena, et al. "Antibacterial Activity of Three Extra Virgin Olive Oils of the Campania Region, Southern Italy, Related to Their Polyphenol Content and Composition." Microorganisms vol. 7,9 (2019). doi: https://doi.org/10.3390/microorganisms7090321
Nazzaro F, Fratianni F, Cozzolino R, Martignetti A, Malorni L, De Feo V, Cruz AG, d'Acierno A. Antibacterial Activity of Three Extra Virgin Olive Oils of the Campania Region, Southern Italy, Related to Their Polyphenol Content and Composition. Microorganisms. 2019 Sep 05;7(9). doi: 10.3390/microorganisms7090321. PMID: 31491985; PMCID: PMC6780878.
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Inflammation and immune evasion coexist in .

JAAD case reports

Trujillo R, Cervantes J, Hawley KL, Cruz AR, Babapoor S, Murphy M, Dadras SS, Salazar JC.
PMID: 29984283
JAAD Case Rep. 2018 Apr 30;4(5):462-464. doi: 10.1016/j.jdcr.2018.03.011. eCollection 2018 Jun.

No abstract available.

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Trujillo R, Cervantes J, Hawley KL, et al. Inflammation and immune evasion coexist in . JAAD Case Rep. 2018;4(5):462-464doi: 10.1016/j.jdcr.2018.03.011.
Trujillo, R., Cervantes, J., Hawley, K. L., Cruz, A. R., Babapoor, S., Murphy, M., Dadras, S. S., & Salazar, J. C. (2018). Inflammation and immune evasion coexist in . JAAD case reports, 4(5), 462-464. https://doi.org/10.1016/j.jdcr.2018.03.011
Trujillo, Rodolfo, et al. "Inflammation and immune evasion coexist in ." JAAD case reports vol. 4,5 (2018): 462-464. doi: https://doi.org/10.1016/j.jdcr.2018.03.011
Trujillo R, Cervantes J, Hawley KL, Cruz AR, Babapoor S, Murphy M, Dadras SS, Salazar JC. Inflammation and immune evasion coexist in . JAAD Case Rep. 2018 Apr 30;4(5):462-464. doi: 10.1016/j.jdcr.2018.03.011. eCollection 2018 Jun. PMID: 29984283; PMCID: PMC6031590.
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Community education to enhance the more equitable use of precision medicine in Northern Manhattan.

Journal of genetic counseling

Hillyer GC, Schmitt KM, Reyes A, Cruz A, Lizardo M, Schwartz GK, Terry MB.
PMID: 32157769
J Genet Couns. 2020 Apr;29(2):247-258. doi: 10.1002/jgc4.1244. Epub 2020 Mar 10.

Focusing screening and treatment to those most likely to benefit is the promise of precision medicine but inequitable distribution of precision medicine innovations may exacerbate health disparities. We investigated whether complex genomic concepts can be successfully communicated to diverse...

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Hillyer GC, Schmitt KM, Reyes A, et al. Community education to enhance the more equitable use of precision medicine in Northern Manhattan. J Genet Couns. 2020;29(2):247-258doi: 10.1002/jgc4.1244.
Hillyer, G. C., Schmitt, K. M., Reyes, A., Cruz, A., Lizardo, M., Schwartz, G. K., & Terry, M. B. (2020). Community education to enhance the more equitable use of precision medicine in Northern Manhattan. Journal of genetic counseling, 29(2), 247-258. https://doi.org/10.1002/jgc4.1244
Hillyer, Grace C, et al. "Community education to enhance the more equitable use of precision medicine in Northern Manhattan." Journal of genetic counseling vol. 29,2 (2020): 247-258. doi: https://doi.org/10.1002/jgc4.1244
Hillyer GC, Schmitt KM, Reyes A, Cruz A, Lizardo M, Schwartz GK, Terry MB. Community education to enhance the more equitable use of precision medicine in Northern Manhattan. J Genet Couns. 2020 Apr;29(2):247-258. doi: 10.1002/jgc4.1244. Epub 2020 Mar 10. PMID: 32157769; PMCID: PMC7138137.
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Targeting Mindsets, Not Just Tumors.

Trends in cancer

Zion SR, Schapira L, Crum AJ.
PMID: 31706503
Trends Cancer. 2019 Oct;5(10):573-576. doi: 10.1016/j.trecan.2019.08.001. Epub 2019 Oct 05.

Mindsets - core assumptions about the nature and workings of things in the world - are a critical but relatively understudied variable that can influence mental and physical health in patients with cancer. Precise, targeted psychological interventions aimed at...

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Zion SR, Schapira L, Crum AJ. Targeting Mindsets, Not Just Tumors. Trends Cancer. 2019;5(10):573-576doi: 10.1016/j.trecan.2019.08.001.
Zion, S. R., Schapira, L., & Crum, A. J. (2019). Targeting Mindsets, Not Just Tumors. Trends in cancer, 5(10), 573-576. https://doi.org/10.1016/j.trecan.2019.08.001
Zion, Sean R, et al. "Targeting Mindsets, Not Just Tumors." Trends in cancer vol. 5,10 (2019): 573-576. doi: https://doi.org/10.1016/j.trecan.2019.08.001
Zion SR, Schapira L, Crum AJ. Targeting Mindsets, Not Just Tumors. Trends Cancer. 2019 Oct;5(10):573-576. doi: 10.1016/j.trecan.2019.08.001. Epub 2019 Oct 05. PMID: 31706503; PMCID: PMC7059887.
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Synthesis and evaluation of novel chromanone and quinolinone analogues of uniflorol as anti-leishmanial agents.

Heliyon

Castro H, Cruz T, de Aguiar Amaral P, da Silva Cardoso P, Alsaffar A, Farrell P, Tomás AM, Barlow JW.
PMID: 32258470
Heliyon. 2020 Mar 20;6(3):e03614. doi: 10.1016/j.heliyon.2020.e03614. eCollection 2020 Mar.

Within this work, we describe the design and synthesis of a range of novel chromanones and quinolinones, based on natural products reported to possess anti-leishmanial action. The core heterocycles were obtained either via classical or ionic liquid mediated Kabbe...

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Castro H, Cruz T, de Aguiar Amaral P, et al. Synthesis and evaluation of novel chromanone and quinolinone analogues of uniflorol as anti-leishmanial agents. Heliyon. 2020;6(3):e03614doi: 10.1016/j.heliyon.2020.e03614.
Castro, H., Cruz, T., de Aguiar Amaral, P., da Silva Cardoso, P., Alsaffar, A., Farrell, P., Tomás, A. M., & Barlow, J. W. (2020). Synthesis and evaluation of novel chromanone and quinolinone analogues of uniflorol as anti-leishmanial agents. Heliyon, 6(3), e03614. https://doi.org/10.1016/j.heliyon.2020.e03614
Castro, Helena, et al. "Synthesis and evaluation of novel chromanone and quinolinone analogues of uniflorol as anti-leishmanial agents." Heliyon vol. 6,3 (2020): e03614. doi: https://doi.org/10.1016/j.heliyon.2020.e03614
Castro H, Cruz T, de Aguiar Amaral P, da Silva Cardoso P, Alsaffar A, Farrell P, Tomás AM, Barlow JW. Synthesis and evaluation of novel chromanone and quinolinone analogues of uniflorol as anti-leishmanial agents. Heliyon. 2020 Mar 20;6(3):e03614. doi: 10.1016/j.heliyon.2020.e03614. eCollection 2020 Mar. PMID: 32258470; PMCID: PMC7096758.
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Monitoring inorganic pyrophosphatase activity with the fluorescent dizinc(ii) complex of a macrocycle bearing one dansylamidoethyl antenna.

Dalton transactions (Cambridge, England : 2003)

Cruz A, Núñez-Montenegro A, Mateus P, Delgado R.
PMID: 32608414
Dalton Trans. 2020 Jul 21;49(27):9487-9494. doi: 10.1039/d0dt01673j. Epub 2020 Jul 01.

The dizinc(ii) complexes of L were used for the recognition of anions by fluorescence spectroscopy (L is a heteroditopic hexaazamacrocycle with two diethylenetriamine coordination heads with 2-methylpyridyl and dansylamido ethyl arms, and m-xylyl spacers). The protonation of L and...

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Cruz A, Núñez-Montenegro A, Mateus P, et al. Monitoring inorganic pyrophosphatase activity with the fluorescent dizinc(ii) complex of a macrocycle bearing one dansylamidoethyl antenna. Dalton Trans. 2020;49(27):9487-9494doi: 10.1039/d0dt01673j.
Cruz, A., Núñez-Montenegro, A., Mateus, P., & Delgado, R. (2020). Monitoring inorganic pyrophosphatase activity with the fluorescent dizinc(ii) complex of a macrocycle bearing one dansylamidoethyl antenna. Dalton transactions (Cambridge, England : 2003), 49(27), 9487-9494. https://doi.org/10.1039/d0dt01673j
Cruz, Ana, et al. "Monitoring inorganic pyrophosphatase activity with the fluorescent dizinc(ii) complex of a macrocycle bearing one dansylamidoethyl antenna." Dalton transactions (Cambridge, England : 2003) vol. 49,27 (2020): 9487-9494. doi: https://doi.org/10.1039/d0dt01673j
Cruz A, Núñez-Montenegro A, Mateus P, Delgado R. Monitoring inorganic pyrophosphatase activity with the fluorescent dizinc(ii) complex of a macrocycle bearing one dansylamidoethyl antenna. Dalton Trans. 2020 Jul 21;49(27):9487-9494. doi: 10.1039/d0dt01673j. Epub 2020 Jul 01. PMID: 32608414.
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Showing 37 to 48 of 540 entries