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An eFP browser for visualizing strawberry fruit and flower transcriptomes.

Horticulture research

Hawkins C, Caruana J, Li J, Zawora C, Darwish O, Wu J, Alkharouf N, Liu Z.
PMID: 28674614
Hortic Res. 2017 Jun 21;4:17029. doi: 10.1038/hortres.2017.29. eCollection 2017.

Wild strawberry

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Hawkins C, Caruana J, Li J, et al. An eFP browser for visualizing strawberry fruit and flower transcriptomes. Hortic Res. 2017;4:17029doi: 10.1038/hortres.2017.29.
Hawkins, C., Caruana, J., Li, J., Zawora, C., Darwish, O., Wu, J., Alkharouf, N., & Liu, Z. (2017). An eFP browser for visualizing strawberry fruit and flower transcriptomes. Horticulture research, 417029. https://doi.org/10.1038/hortres.2017.29
Hawkins, Charles, et al. "An eFP browser for visualizing strawberry fruit and flower transcriptomes." Horticulture research vol. 4 (2017): 17029. doi: https://doi.org/10.1038/hortres.2017.29
Hawkins C, Caruana J, Li J, Zawora C, Darwish O, Wu J, Alkharouf N, Liu Z. An eFP browser for visualizing strawberry fruit and flower transcriptomes. Hortic Res. 2017 Jun 21;4:17029. doi: 10.1038/hortres.2017.29. eCollection 2017. PMID: 28674614; PMCID: PMC5478792.
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Nucleophilic Dearomatization of Pyridines under Enamine Catalysis: Regio-, Diastereo-, and Enantioselective Addition of Aldehydes to Activated N-Alkylpyridinium Salts.

Organic letters

Bertuzzi G, Sinisi A, Pecorari D, Caruana L, Mazzanti A, Bernardi L, Fochi M.
PMID: 28128963
Org Lett. 2017 Feb 17;19(4):834-837. doi: 10.1021/acs.orglett.6b03824. Epub 2017 Jan 27.

Catalytic addition of chiral enamines to azinium salts is a powerful tool for the synthesis of enantioenriched heterocycles. An unprecedented asymmetric dearomative addition of aldehydes to activated N-alkylpyridinium salts is presented. The process exhibits complete C-4 regioselectivity along with...

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Bertuzzi G, Sinisi A, Pecorari D, et al. Nucleophilic Dearomatization of Pyridines under Enamine Catalysis: Regio-, Diastereo-, and Enantioselective Addition of Aldehydes to Activated N-Alkylpyridinium Salts. Org Lett. 2017;19(4):834-837doi: 10.1021/acs.orglett.6b03824.
Bertuzzi, G., Sinisi, A., Pecorari, D., Caruana, L., Mazzanti, A., Bernardi, L., & Fochi, M. (2017). Nucleophilic Dearomatization of Pyridines under Enamine Catalysis: Regio-, Diastereo-, and Enantioselective Addition of Aldehydes to Activated N-Alkylpyridinium Salts. Organic letters, 19(4), 834-837. https://doi.org/10.1021/acs.orglett.6b03824
Bertuzzi, Giulio, et al. "Nucleophilic Dearomatization of Pyridines under Enamine Catalysis: Regio-, Diastereo-, and Enantioselective Addition of Aldehydes to Activated N-Alkylpyridinium Salts." Organic letters vol. 19,4 (2017): 834-837. doi: https://doi.org/10.1021/acs.orglett.6b03824
Bertuzzi G, Sinisi A, Pecorari D, Caruana L, Mazzanti A, Bernardi L, Fochi M. Nucleophilic Dearomatization of Pyridines under Enamine Catalysis: Regio-, Diastereo-, and Enantioselective Addition of Aldehydes to Activated N-Alkylpyridinium Salts. Org Lett. 2017 Feb 17;19(4):834-837. doi: 10.1021/acs.orglett.6b03824. Epub 2017 Jan 27. PMID: 28128963.
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Correction: JNK1 and ERK1/2 modulate lymphocyte homeostasis via BIM and DRP1 upon AICD induction.

Cell death and differentiation

Simula L, Corrado M, Accordi B, Di Rita A, Nazio F, Antonucci Y, Di Daniele A, Caicci F, Caruana I, Soriano ME, Pigazzi M, Locatelli F, Cecconi F, Campello S.
PMID: 32690872
Cell Death Differ. 2020 Nov;27(11):3208. doi: 10.1038/s41418-020-0589-x.

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

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Simula L, Corrado M, Accordi B, et al. Correction: JNK1 and ERK1/2 modulate lymphocyte homeostasis via BIM and DRP1 upon AICD induction. Cell Death Differ. 2020;27(11):3208doi: 10.1038/s41418-020-0589-x.
Simula, L., Corrado, M., Accordi, B., Di Rita, A., Nazio, F., Antonucci, Y., Di Daniele, A., Caicci, F., Caruana, I., Soriano, M. E., Pigazzi, M., Locatelli, F., Cecconi, F., & Campello, S. (2020). Correction: JNK1 and ERK1/2 modulate lymphocyte homeostasis via BIM and DRP1 upon AICD induction. Cell death and differentiation, 27(11), 3208. https://doi.org/10.1038/s41418-020-0589-x
Simula, Luca, et al. "Correction: JNK1 and ERK1/2 modulate lymphocyte homeostasis via BIM and DRP1 upon AICD induction." Cell death and differentiation vol. 27,11 (2020): 3208. doi: https://doi.org/10.1038/s41418-020-0589-x
Simula L, Corrado M, Accordi B, Di Rita A, Nazio F, Antonucci Y, Di Daniele A, Caicci F, Caruana I, Soriano ME, Pigazzi M, Locatelli F, Cecconi F, Campello S. Correction: JNK1 and ERK1/2 modulate lymphocyte homeostasis via BIM and DRP1 upon AICD induction. Cell Death Differ. 2020 Nov;27(11):3208. doi: 10.1038/s41418-020-0589-x. PMID: 32690872; PMCID: PMC7560651.
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Tuberculosis trend among native and foreign-born people over a 17 year period (2004-2020) in a large province in Northern Italy.

Scientific reports

Marchese V, Rossi L, Formenti B, Magoni M, Caruana A, Sileo C, Lanfredini L, Castelli F, Matteelli A.
PMID: 34862409
Sci Rep. 2021 Dec 03;11(1):23394. doi: 10.1038/s41598-021-02540-4.

Tuberculosis (TB) incidence should decline by 20% in the Europe in 2015-2020, in line with End-TB milestones. We retrospectively evaluated TB notifications in the province of Brescia from 2004 to 2020. Cases were classified per patient origin and entitlement...

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Marchese V, Rossi L, Formenti B, et al. Tuberculosis trend among native and foreign-born people over a 17 year period (2004-2020) in a large province in Northern Italy. Sci Rep. 2021;11(1):23394doi: 10.1038/s41598-021-02540-4.
Marchese, V., Rossi, L., Formenti, B., Magoni, M., Caruana, A., Sileo, C., Lanfredini, L., Castelli, F., & Matteelli, A. (2021). Tuberculosis trend among native and foreign-born people over a 17 year period (2004-2020) in a large province in Northern Italy. Scientific reports, 11(1), 23394. https://doi.org/10.1038/s41598-021-02540-4
Marchese, Valentina, et al. "Tuberculosis trend among native and foreign-born people over a 17 year period (2004-2020) in a large province in Northern Italy." Scientific reports vol. 11,1 (2021): 23394. doi: https://doi.org/10.1038/s41598-021-02540-4
Marchese V, Rossi L, Formenti B, Magoni M, Caruana A, Sileo C, Lanfredini L, Castelli F, Matteelli A. Tuberculosis trend among native and foreign-born people over a 17 year period (2004-2020) in a large province in Northern Italy. Sci Rep. 2021 Dec 03;11(1):23394. doi: 10.1038/s41598-021-02540-4. PMID: 34862409; PMCID: PMC8642384.
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Causal analysis of fetal death in high-risk pregnancies.

Journal of perinatal medicine

Aguinaga M, Valdespino Y, Medina D, Espino Y Sosa S, Sevilla R, Miranda O, Acevedo S, Monroy IE, Helguera AC, Pérez J, Mariscal LF, Murillo MR, Lara RM, Armijos JC, Rogel G, Cardona JA.
PMID: 33735952
J Perinat Med. 2021 Mar 19;49(6):740-747. doi: 10.1515/jpm-2020-0352. Print 2021 Jul 27.

OBJECTIVES: To determine the causes of fetal death among the stillbirths using two classification systems from 22 weeks of gestation in a period of three years in high-risk pregnancies. This is a retrospective observational study.METHODS: The National Institute of...

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Aguinaga M, Valdespino Y, Medina D, et al. Causal analysis of fetal death in high-risk pregnancies. J Perinat Med. 2021;49(6):740-747doi: 10.1515/jpm-2020-0352.
Aguinaga, M., Valdespino, Y., Medina, D., Espino Y Sosa, S., Sevilla, R., Miranda, O., Acevedo, S., Monroy, I. E., Helguera, A. C., Pérez, J., Mariscal, L. F., Murillo, M. R., Lara, R. M., Armijos, J. C., Rogel, G., & Cardona, J. A. (2021). Causal analysis of fetal death in high-risk pregnancies. Journal of perinatal medicine, 49(6), 740-747. https://doi.org/10.1515/jpm-2020-0352
Aguinaga, Mónica, et al. "Causal analysis of fetal death in high-risk pregnancies." Journal of perinatal medicine vol. 49,6 (2021): 740-747. doi: https://doi.org/10.1515/jpm-2020-0352
Aguinaga M, Valdespino Y, Medina D, Espino Y Sosa S, Sevilla R, Miranda O, Acevedo S, Monroy IE, Helguera AC, Pérez J, Mariscal LF, Murillo MR, Lara RM, Armijos JC, Rogel G, Cardona JA. Causal analysis of fetal death in high-risk pregnancies. J Perinat Med. 2021 Mar 19;49(6):740-747. doi: 10.1515/jpm-2020-0352. Print 2021 Jul 27. PMID: 33735952.
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Targeting cancer stem cells in medulloblastoma by inhibiting AMBRA1 dual function in autophagy and STAT3 signalling.

Acta neuropathologica

Nazio F, Po A, Abballe L, Ballabio C, Diomedi Camassei F, Bordi M, Camera A, Caruso S, Caruana I, Pezzullo M, Ferraina C, Milletti G, Gianesello M, Reddel S, De Luca CD, Ceglie D, Marinelli S, Campello S, Papaleo E, Miele E, Cacchione A, Carai A, Vinci M, Velardi E, De Angelis B, Tiberi L, Quintarelli C, Mastronuzzi A, Ferretti E, Locatelli F, Cecconi F.
PMID: 34302498
Acta Neuropathol. 2021 Sep;142(3):537-564. doi: 10.1007/s00401-021-02347-7. Epub 2021 Jul 24.

Medulloblastoma (MB) is a childhood malignant brain tumour comprising four main subgroups characterized by different genetic alterations and rate of mortality. Among MB subgroups, patients with enhanced levels of the c-MYC oncogene (MB

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Nazio F, Po A, Abballe L, et al. Targeting cancer stem cells in medulloblastoma by inhibiting AMBRA1 dual function in autophagy and STAT3 signalling. Acta Neuropathol. 2021;142(3):537-564doi: 10.1007/s00401-021-02347-7.
Nazio, F., Po, A., Abballe, L., Ballabio, C., Diomedi Camassei, F., Bordi, M., Camera, A., Caruso, S., Caruana, I., Pezzullo, M., Ferraina, C., Milletti, G., Gianesello, M., Reddel, S., De Luca, C. D., Ceglie, D., Marinelli, S., Campello, S., Papaleo, E., Miele, E., Cacchione, A., Carai, A., Vinci, M., Velardi, E., De Angelis, B., Tiberi, L., Quintarelli, C., Mastronuzzi, A., Ferretti, E., Locatelli, F., & Cecconi, F. (2021). Targeting cancer stem cells in medulloblastoma by inhibiting AMBRA1 dual function in autophagy and STAT3 signalling. Acta neuropathologica, 142(3), 537-564. https://doi.org/10.1007/s00401-021-02347-7
Nazio, Francesca, et al. "Targeting cancer stem cells in medulloblastoma by inhibiting AMBRA1 dual function in autophagy and STAT3 signalling." Acta neuropathologica vol. 142,3 (2021): 537-564. doi: https://doi.org/10.1007/s00401-021-02347-7
Nazio F, Po A, Abballe L, Ballabio C, Diomedi Camassei F, Bordi M, Camera A, Caruso S, Caruana I, Pezzullo M, Ferraina C, Milletti G, Gianesello M, Reddel S, De Luca CD, Ceglie D, Marinelli S, Campello S, Papaleo E, Miele E, Cacchione A, Carai A, Vinci M, Velardi E, De Angelis B, Tiberi L, Quintarelli C, Mastronuzzi A, Ferretti E, Locatelli F, Cecconi F. Targeting cancer stem cells in medulloblastoma by inhibiting AMBRA1 dual function in autophagy and STAT3 signalling. Acta Neuropathol. 2021 Sep;142(3):537-564. doi: 10.1007/s00401-021-02347-7. Epub 2021 Jul 24. PMID: 34302498; PMCID: PMC8357694.
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Being an excellent scientist is not enough to succeed! Soft skills for medical physicists.

European journal of radiology

Caruana CJ, Damilakis J.
PMID: 34961639
Eur J Radiol. 2021 Dec 14;110108. doi: 10.1016/j.ejrad.2021.110108. Epub 2021 Dec 14.

PURPOSE: To provide a review of the literature and commentary regarding soft skills for Medical Physicists.METHOD: A comprehensive search in PubMed was carried out using the searchwords 'medical physics' coupled separately ('AND', both in Title) with each of the...

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Caruana CJ, Damilakis J. Being an excellent scientist is not enough to succeed! Soft skills for medical physicists. Eur J Radiol. 2021;110108doi: 10.1016/j.ejrad.2021.110108.
Caruana, C. J., & Damilakis, J. (2021). Being an excellent scientist is not enough to succeed! Soft skills for medical physicists. European journal of radiology, 110108. https://doi.org/10.1016/j.ejrad.2021.110108
Caruana, Carmel J, and Damilakis, John. "Being an excellent scientist is not enough to succeed! Soft skills for medical physicists." European journal of radiology vol. (2021): 110108. doi: https://doi.org/10.1016/j.ejrad.2021.110108
Caruana CJ, Damilakis J. Being an excellent scientist is not enough to succeed! Soft skills for medical physicists. Eur J Radiol. 2021 Dec 14;110108. doi: 10.1016/j.ejrad.2021.110108. Epub 2021 Dec 14. PMID: 34961639.
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Altered insulin pathway compromises mitochondrial function and quality control both in in vitro and in vivo model systems.

Mitochondrion

Galizzi G, Palumbo L, Amato A, Conigliaro A, Nuzzo D, Terzo S, Caruana L, Picone P, Alessandro R, Mulè F, Di Carlo M.
PMID: 34454074
Mitochondrion. 2021 Sep;60:178-188. doi: 10.1016/j.mito.2021.08.014. Epub 2021 Aug 25.

Altered insulin signaling and insulin resistance are considered the link between Alzheimer's disease (AD) and metabolic syndrome. Here, by using an in vitro and an in vivo model, we investigated the relationship between these disorders focusing on neuronal mitochondrial...

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Galizzi G, Palumbo L, Amato A, et al. Altered insulin pathway compromises mitochondrial function and quality control both in in vitro and in vivo model systems. Mitochondrion. 2021;60:178-188doi: 10.1016/j.mito.2021.08.014.
Galizzi, G., Palumbo, L., Amato, A., Conigliaro, A., Nuzzo, D., Terzo, S., Caruana, L., Picone, P., Alessandro, R., Mulè, F., & Di Carlo, M. (2021). Altered insulin pathway compromises mitochondrial function and quality control both in in vitro and in vivo model systems. Mitochondrion, 60178-188. https://doi.org/10.1016/j.mito.2021.08.014
Galizzi, Giacoma, et al. "Altered insulin pathway compromises mitochondrial function and quality control both in in vitro and in vivo model systems." Mitochondrion vol. 60 (2021): 178-188. doi: https://doi.org/10.1016/j.mito.2021.08.014
Galizzi G, Palumbo L, Amato A, Conigliaro A, Nuzzo D, Terzo S, Caruana L, Picone P, Alessandro R, Mulè F, Di Carlo M. Altered insulin pathway compromises mitochondrial function and quality control both in in vitro and in vivo model systems. Mitochondrion. 2021 Sep;60:178-188. doi: 10.1016/j.mito.2021.08.014. Epub 2021 Aug 25. PMID: 34454074.
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Woodland strawberry axillary bud fate is dictated by a crosstalk of environmental and endogenous factors.

Plant physiology

Andrés J, Caruana J, Liang J, Samad S, Monfort A, Liu Z, Hytönen T, Koskela EA.
PMID: 34618090
Plant Physiol. 2021 Nov 03;187(3):1221-1234. doi: 10.1093/plphys/kiab421.

Plant architecture is defined by fates and positions of meristematic tissues and has direct consequences on yield potential and environmental adaptation of the plant. In strawberries (Fragaria vesca L. and F. × ananassa Duch.), shoot apical meristems can remain...

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Andrés J, Caruana J, Liang J, et al. Woodland strawberry axillary bud fate is dictated by a crosstalk of environmental and endogenous factors. Plant Physiol. 2021;187(3):1221-1234doi: 10.1093/plphys/kiab421.
Andrés, J., Caruana, J., Liang, J., Samad, S., Monfort, A., Liu, Z., Hytönen, T., & Koskela, E. A. (2021). Woodland strawberry axillary bud fate is dictated by a crosstalk of environmental and endogenous factors. Plant physiology, 187(3), 1221-1234. https://doi.org/10.1093/plphys/kiab421
Andrés, Javier, et al. "Woodland strawberry axillary bud fate is dictated by a crosstalk of environmental and endogenous factors." Plant physiology vol. 187,3 (2021): 1221-1234. doi: https://doi.org/10.1093/plphys/kiab421
Andrés J, Caruana J, Liang J, Samad S, Monfort A, Liu Z, Hytönen T, Koskela EA. Woodland strawberry axillary bud fate is dictated by a crosstalk of environmental and endogenous factors. Plant Physiol. 2021 Nov 03;187(3):1221-1234. doi: 10.1093/plphys/kiab421. PMID: 34618090; PMCID: PMC8567079.
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Time-Varying Mortality Risk Suggests Increased Impact of Thrombosis in Hospitalized Covid-19 Patients.

medRxiv : the preprint server for health sciences

Lengerich BJ, Nunnally ME, Aphinyanaphongs Y, Caruana R.
PMID: 34931198
medRxiv. 2021 Dec 13; doi: 10.1101/2021.12.11.21267259.

Treatment protocols, treatment availability, disease understanding, and viral characteristics have changed over the course of the Covid-19 pandemic; as a result, the risks associated with patient comorbidities and biomarkers have also changed. We add to the ongoing conversation regarding...

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Lengerich BJ, Nunnally ME, Aphinyanaphongs Y, et al. Time-Varying Mortality Risk Suggests Increased Impact of Thrombosis in Hospitalized Covid-19 Patients. medRxiv. 2021;doi: 10.1101/2021.12.11.21267259.
Lengerich, B. J., Nunnally, M. E., Aphinyanaphongs, Y., & Caruana, R. (2021). Time-Varying Mortality Risk Suggests Increased Impact of Thrombosis in Hospitalized Covid-19 Patients. medRxiv : the preprint server for health sciences, . https://doi.org/10.1101/2021.12.11.21267259
Lengerich, Benjamin J, et al. "Time-Varying Mortality Risk Suggests Increased Impact of Thrombosis in Hospitalized Covid-19 Patients." medRxiv : the preprint server for health sciences vol. (2021). doi: https://doi.org/10.1101/2021.12.11.21267259
Lengerich BJ, Nunnally ME, Aphinyanaphongs Y, Caruana R. Time-Varying Mortality Risk Suggests Increased Impact of Thrombosis in Hospitalized Covid-19 Patients. medRxiv. 2021 Dec 13; doi: 10.1101/2021.12.11.21267259. PMID: 34931198; PMCID: PMC8687469.
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Tonic somatosensory responses and deficits of tactile awareness converge in the parietal operculum.

Brain : a journal of neurology

Del Vecchio M, Fossataro C, Zauli FM, Sartori I, Pigorini A, d'Orio P, Abarrategui B, Russo S, Mikulan EP, Caruana F, Rizzolatti G, Garbarini F, Avanzini P.
PMID: 34633436
Brain. 2021 Dec 31;144(12):3779-3787. doi: 10.1093/brain/awab384.

Although clinical neuroscience and the neuroscience of consciousness have long sought mechanistic explanations of tactile-awareness disorders, mechanistic insights are rare, mainly because of the difficulty of depicting the fine-grained neural dynamics underlying somatosensory processes. Here, we combined the stereo-EEG...

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Del Vecchio M, Fossataro C, Zauli FM, et al. Tonic somatosensory responses and deficits of tactile awareness converge in the parietal operculum. Brain. 2021;144(12):3779-3787doi: 10.1093/brain/awab384.
Del Vecchio, M., Fossataro, C., Zauli, F. M., Sartori, I., Pigorini, A., d'Orio, P., Abarrategui, B., Russo, S., Mikulan, E. P., Caruana, F., Rizzolatti, G., Garbarini, F., & Avanzini, P. (2021). Tonic somatosensory responses and deficits of tactile awareness converge in the parietal operculum. Brain : a journal of neurology, 144(12), 3779-3787. https://doi.org/10.1093/brain/awab384
Del Vecchio, Maria, et al. "Tonic somatosensory responses and deficits of tactile awareness converge in the parietal operculum." Brain : a journal of neurology vol. 144,12 (2021): 3779-3787. doi: https://doi.org/10.1093/brain/awab384
Del Vecchio M, Fossataro C, Zauli FM, Sartori I, Pigorini A, d'Orio P, Abarrategui B, Russo S, Mikulan EP, Caruana F, Rizzolatti G, Garbarini F, Avanzini P. Tonic somatosensory responses and deficits of tactile awareness converge in the parietal operculum. Brain. 2021 Dec 31;144(12):3779-3787. doi: 10.1093/brain/awab384. PMID: 34633436.
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Assessment of Fennel Oil Microfluidized Nanoemulsions Stabilization by Advanced Performance Xanthan Gum.

Foods (Basel, Switzerland)

Llinares R, Ramírez P, Carmona JA, Trujillo-Cayado LA, Muñoz J.
PMID: 33805109
Foods. 2021 Mar 24;10(4). doi: 10.3390/foods10040693.

In this work, nanoemulsion-based delivery system was developed by encapsulation of fennel essential oil. A response surface methodology was used to study the influence of the processing conditions in order to obtain monomodal nanoemulsions of fennel essential oil using...

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Llinares R, Ramírez P, Carmona JA, et al. Assessment of Fennel Oil Microfluidized Nanoemulsions Stabilization by Advanced Performance Xanthan Gum. Foods. 2021;10(4)doi: 10.3390/foods10040693.
Llinares, R., Ramírez, P., Carmona, J. A., Trujillo-Cayado, L. A., & Muñoz, J. (2021). Assessment of Fennel Oil Microfluidized Nanoemulsions Stabilization by Advanced Performance Xanthan Gum. Foods (Basel, Switzerland), 10(4), . https://doi.org/10.3390/foods10040693
Llinares, Rubén, et al. "Assessment of Fennel Oil Microfluidized Nanoemulsions Stabilization by Advanced Performance Xanthan Gum." Foods (Basel, Switzerland) vol. 10,4 (2021). doi: https://doi.org/10.3390/foods10040693
Llinares R, Ramírez P, Carmona JA, Trujillo-Cayado LA, Muñoz J. Assessment of Fennel Oil Microfluidized Nanoemulsions Stabilization by Advanced Performance Xanthan Gum. Foods. 2021 Mar 24;10(4). doi: 10.3390/foods10040693. PMID: 33805109; PMCID: PMC8064095.
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