Display options
Share it on

Biochim Biophys Acta Mol Cell Biol Lipids. 2017 Aug;1862(8):731-739. doi: 10.1016/j.bbalip.2017.04.006. Epub 2017 Apr 28.

The evolution of lipidomics through space and time.

Biochimica et biophysica acta. Molecular and cell biology of lipids

Richard W Gross

Affiliations

  1. Division of Bioorganic Chemistry & Molecular Pharmacology, Department of Medicine, Washington University School of Medicine, 660 South Euclid Avenue, Campus Box 8020, Saint Louis, MO 63110, USA; Department of Developmental Biology, Washington University School of Medicine, Saint Louis, MO 63110, USA; Department of Chemistry, Washington University, Saint Louis, MO 63130, USA. Electronic address: [email protected].

PMID: 28457845 PMCID: PMC5501277 DOI: 10.1016/j.bbalip.2017.04.006

Abstract

Although the foundations of mass spectrometry-based lipidomics have been practiced for over 30 years, recent technological advances in ionization modalities in conjunction with robust increases in mass accuracy and resolution have greatly accelerated the emergence, growth and importance of the field of lipidomics. Moreover, advances in the separation sciences, bioinformatic strategies and the availability of robust databases have been synergistically integrated into modern lipidomic technologies leading to unprecedented improvements in the depth, penetrance and precision of lipidomic analyses and identification of their biological and mechanistic significance. The purpose of this "opinion" article is to briefly review the evolution of lipidomics, critique the platforms that have evolved and identify areas that are likely to emerge in the years to come. Through seamlessly integrating a rich repertoire of mass spectrometric, chemical and bioinformatic strategies, the chemical identities and quantities of tens of thousands to hundreds of thousands of different lipid molecular species and their metabolic alterations during physiologic or pathophysiologic perturbations can be obtained. Thus, the field of lipidomics which already has a distinguished history of exciting new discoveries in many disease states holds unparalleled potential to identify the pleiotropic roles of lipids in health and disease at the chemical level. This article is part of a Special Issue entitled: BBALIP_Lipidomics Opinion Articles edited by Sepp Kohlwein.

Copyright © 2017 Elsevier B.V. All rights reserved.

Keywords: Charge-switch derivatives; Lipidomics; Mass spectrometry; Reverse lipidomics; Shotgun lipidomics

References

  1. Anal Chem. 2016 Sep 20;88(18):9037-46 - PubMed
  2. Proc Natl Acad Sci U S A. 1997 Mar 18;94(6):2339-44 - PubMed
  3. Biochemistry. 1984 Jan 3;23(1):158-65 - PubMed
  4. Mass Spectrom Rev. 2005 May-Jun;24(3):367-412 - PubMed
  5. Trans Assoc Am Physicians. 1979;92:136-47 - PubMed
  6. Proc Natl Acad Sci U S A. 1994 Oct 25;91(22):10635-9 - PubMed
  7. Biochemistry. 1996 May 7;35(18):5822-32 - PubMed
  8. Anal Chem. 2016 Oct 4;88(19):9459-9468 - PubMed
  9. Anal Biochem. 2013 Nov 1;442(1):40-50 - PubMed
  10. J Phys Chem Lett. 2017 Apr 6;8(7):1381-1388 - PubMed
  11. J Biol Chem. 1995 Feb 17;270(7):2885-8 - PubMed
  12. Biochemistry. 1996 Jun 18;35(24):7903-9 - PubMed
  13. Science. 2004 Oct 15;306(5695):471-3 - PubMed
  14. Metabolites. 2013 Sep 11;3(3):787-819 - PubMed
  15. Biochem J. 2000 Nov 15;352 Pt 1:79-89 - PubMed
  16. FEBS Lett. 1981 Jun 1;128(1):37-9 - PubMed
  17. Curr Opin Chem Biol. 2007 Feb;11(1):29-35 - PubMed
  18. Anal Chem. 2009 Apr 15;81(8):2969-75 - PubMed
  19. Mass Spectrom Rev. 2012 Jan-Feb;31(1):134-78 - PubMed
  20. Anal Chem. 2010 Aug 15;82(16):6790-6 - PubMed
  21. J Clin Invest. 1993 Jun;91(6):2513-22 - PubMed
  22. Biochemistry. 2005 Dec 20;44(50):16684-94 - PubMed
  23. Neuroscience. 2010 Oct 27;170(3):858-64 - PubMed
  24. Anal Bioanal Chem. 2015 Jul;407(17):5199-210 - PubMed
  25. Mass Spectrom (Tokyo). 2013;2(Spec Iss):S0015 - PubMed
  26. Anal Chem. 2012 Jun 5;84(11):5035-9 - PubMed
  27. Anal Chem. 2002 Mar 1;74(5):941-9 - PubMed
  28. Curr Opin Chem Biol. 2016 Feb;30:87-93 - PubMed
  29. Biochemistry. 1985 Mar 26;24(7):1662-8 - PubMed
  30. J Chromatogr. 1980 Sep 5;197(1):79-85 - PubMed
  31. Acc Chem Res. 2016 Sep 20;49(9):1596-604 - PubMed
  32. J Am Soc Mass Spectrom. 2016 Dec;27(12 ):2014-2024 - PubMed
  33. Biochim Biophys Acta. 2011 Nov;1811(11):946-60 - PubMed
  34. Bioinformatics. 2016 Jan 15;32(2):268-75 - PubMed
  35. Anal Chem. 2008 Oct 1;80(19):7576-85 - PubMed
  36. Anal Chem. 2006 Sep 1;78(17):6140-52 - PubMed
  37. Biochemistry. 1994 May 17;33(19):5805-12 - PubMed
  38. J Am Soc Mass Spectrom. 1995 Dec;6(12):1202-10 - PubMed
  39. Cell Chem Biol. 2016 Oct 20;23 (10 ):1217-1227 - PubMed
  40. J Lipid Res. 2006 Apr;47(4):864-79 - PubMed
  41. Science. 1989 Oct 6;246(4926):64-71 - PubMed
  42. J Mass Spectrom. 2012 Jan;47(1):96-104 - PubMed
  43. Chem Biol. 2014 Nov 20;21(11):1575-84 - PubMed
  44. Anal Chem. 2013 Oct 15;85(20):9742-50 - PubMed

Substances

MeSH terms

Publication Types

Grant support