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Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination.

American journal of respiratory and critical care medicine

de Steenhuijsen Piters WAA, Bogaert D.
PMID: 32049545
Am J Respir Crit Care Med. 2020 May 15;201(10):1310-1311. doi: 10.1164/rccm.202001-0050LE.

No abstract available.

Cite
de Steenhuijsen Piters WAA, Bogaert D. Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination. Am J Respir Crit Care Med. 2020;201(10):1310-1311doi: 10.1164/rccm.202001-0050LE.
de Steenhuijsen Piters, W. A. A., & Bogaert, D. (2020). Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination. American journal of respiratory and critical care medicine, 201(10), 1310-1311. https://doi.org/10.1164/rccm.202001-0050LE
de Steenhuijsen Piters, Wouter A A, and Bogaert, Debby. "Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination." American journal of respiratory and critical care medicine vol. 201,10 (2020): 1310-1311. doi: https://doi.org/10.1164/rccm.202001-0050LE
de Steenhuijsen Piters WAA, Bogaert D. Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination. Am J Respir Crit Care Med. 2020 May 15;201(10):1310-1311. doi: 10.1164/rccm.202001-0050LE. PMID: 32049545; PMCID: PMC7233333.
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Topological events in single molecules of E. coli DNA confined in nanochannels.

The Analyst

Reifenberger JG, Dorfman KD, Cao H.
PMID: 25991508
Analyst. 2015 Jul 21;140(14):4887-94. doi: 10.1039/c5an00343a. Epub 2015 May 20.

We present experimental data concerning potential topological events such as folds, internal backfolds, and/or knots within long molecules of double-stranded DNA when they are stretched by confinement in a nanochannel. Genomic DNA from E. coli was labeled near the...

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Reifenberger JG, Dorfman KD, Cao H. Topological events in single molecules of E. coli DNA confined in nanochannels. Analyst. 2015;140(14):4887-94doi: 10.1039/c5an00343a.
Reifenberger, J. G., Dorfman, K. D., & Cao, H. (2015). Topological events in single molecules of E. coli DNA confined in nanochannels. The Analyst, 140(14), 4887-94. https://doi.org/10.1039/c5an00343a
Reifenberger, Jeffrey G, et al. "Topological events in single molecules of E. coli DNA confined in nanochannels." The Analyst vol. 140,14 (2015): 4887-94. doi: https://doi.org/10.1039/c5an00343a
Reifenberger JG, Dorfman KD, Cao H. Topological events in single molecules of E. coli DNA confined in nanochannels. Analyst. 2015 Jul 21;140(14):4887-94. doi: 10.1039/c5an00343a. Epub 2015 May 20. PMID: 25991508; PMCID: PMC4486629.
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Epigenetic mechanisms in microbial members of the human microbiota: current knowledge and perspectives.

Epigenomics

Cureau N, AlJahdali N, Vo N, Carbonero F.
PMID: 27587189
Epigenomics. 2016 Sep;8(9):1259-73. doi: 10.2217/epi-2016-0057. Epub 2016 Sep 02.

The human microbiota and epigenetic processes have both been shown to play a crucial role in health and disease. However, there is extremely scarce information on epigenetic modulation of microbiota members except for a few pathogens. Mainly DNA adenine...

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Cureau N, AlJahdali N, Vo N, et al. Epigenetic mechanisms in microbial members of the human microbiota: current knowledge and perspectives. Epigenomics. 2016;8(9):1259-73doi: 10.2217/epi-2016-0057.
Cureau, N., AlJahdali, N., Vo, N., & Carbonero, F. (2016). Epigenetic mechanisms in microbial members of the human microbiota: current knowledge and perspectives. Epigenomics, 8(9), 1259-73. https://doi.org/10.2217/epi-2016-0057
Cureau, Natacha, et al. "Epigenetic mechanisms in microbial members of the human microbiota: current knowledge and perspectives." Epigenomics vol. 8,9 (2016): 1259-73. doi: https://doi.org/10.2217/epi-2016-0057
Cureau N, AlJahdali N, Vo N, Carbonero F. Epigenetic mechanisms in microbial members of the human microbiota: current knowledge and perspectives. Epigenomics. 2016 Sep;8(9):1259-73. doi: 10.2217/epi-2016-0057. Epub 2016 Sep 02. PMID: 27587189.
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[The structure of bacterial desoxyribonucleic acids in solution].

Journal of molecular biology

LUZZATI V, LUZZATI D, MASSON F.
PMID: 13931886
J Mol Biol. 1962 Oct;5:375-83. doi: 10.1016/s0022-2836(62)80026-6.

No abstract available.

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LUZZATI V, LUZZATI D, MASSON F. [The structure of bacterial desoxyribonucleic acids in solution]. J Mol Biol. 1962;5:375-83doi: 10.1016/s0022-2836(62)80026-6.
LUZZATI, V., LUZZATI, D., & MASSON, F. (1962). [The structure of bacterial desoxyribonucleic acids in solution]. Journal of molecular biology, 5375-83. https://doi.org/10.1016/s0022-2836(62)80026-6
LUZZATI, V, et al. "[The structure of bacterial desoxyribonucleic acids in solution]." Journal of molecular biology vol. 5 (1962): 375-83. doi: https://doi.org/10.1016/s0022-2836(62)80026-6
LUZZATI V, LUZZATI D, MASSON F. [The structure of bacterial desoxyribonucleic acids in solution]. J Mol Biol. 1962 Oct;5:375-83. doi: 10.1016/s0022-2836(62)80026-6. French. PMID: 13931886.
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On latest progress around structure and function of DNA.

Japanese journal of medical science & biology

ISO K.
PMID: 13956923
Jpn J Med Sci Biol. 1962 Aug;15:232-3.

No abstract available.

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ISO K. On latest progress around structure and function of DNA. Jpn J Med Sci Biol. 1962;15:232-3
ISO, K. (1962). On latest progress around structure and function of DNA. Japanese journal of medical science & biology, 15232-3.
ISO, K. "On latest progress around structure and function of DNA." Japanese journal of medical science & biology vol. 15 (1962): 232-3.
ISO K. On latest progress around structure and function of DNA. Jpn J Med Sci Biol. 1962 Aug;15:232-3. PMID: 13956923.
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Rapid real-time recirculating PCR using localized surface plasmon resonance (LSPR) and piezo-electric pumping.

Lab on a chip

Haber JM, Gascoyne PRC, Sokolov K.
PMID: 28703830
Lab Chip. 2017 Aug 08;17(16):2821-2830. doi: 10.1039/c7lc00211d.

Rapid detection and characterization of pathogens in patients with bloodstream infections (BSIs) is a persistent problem for modern medicine, as current techniques are slow or provide incomplete diagnostic information. Real-time polymerase chain reaction (qPCR) allows specific detection of a...

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Haber JM, Gascoyne PRC, Sokolov K. Rapid real-time recirculating PCR using localized surface plasmon resonance (LSPR) and piezo-electric pumping. Lab Chip. 2017;17(16):2821-2830doi: 10.1039/c7lc00211d.
Haber, J. M., Gascoyne, P. R. C., & Sokolov, K. (2017). Rapid real-time recirculating PCR using localized surface plasmon resonance (LSPR) and piezo-electric pumping. Lab on a chip, 17(16), 2821-2830. https://doi.org/10.1039/c7lc00211d
Haber, J M, et al. "Rapid real-time recirculating PCR using localized surface plasmon resonance (LSPR) and piezo-electric pumping." Lab on a chip vol. 17,16 (2017): 2821-2830. doi: https://doi.org/10.1039/c7lc00211d
Haber JM, Gascoyne PRC, Sokolov K. Rapid real-time recirculating PCR using localized surface plasmon resonance (LSPR) and piezo-electric pumping. Lab Chip. 2017 Aug 08;17(16):2821-2830. doi: 10.1039/c7lc00211d. PMID: 28703830; PMCID: PMC5612715.
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How cells in distress use SOS.

Nature

Sedgwick SG, Yarranton GT.
PMID: 7070507
Nature. 1982 Apr 15;296(5858):606-7. doi: 10.1038/296606a0.

No abstract available.

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Sedgwick SG, Yarranton GT. How cells in distress use SOS. Nature. 1982;296(5858):606-7doi: 10.1038/296606a0.
Sedgwick, S. G., & Yarranton, G. T. (1982). How cells in distress use SOS. Nature, 296(5858), 606-7. https://doi.org/10.1038/296606a0
Sedgwick, S G, and Yarranton, G T. "How cells in distress use SOS." Nature vol. 296,5858 (1982): 606-7. doi: https://doi.org/10.1038/296606a0
Sedgwick SG, Yarranton GT. How cells in distress use SOS. Nature. 1982 Apr 15;296(5858):606-7. doi: 10.1038/296606a0. PMID: 7070507.
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Reply to de Steenhuijsen Piters and Bogaert: Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination.

American journal of respiratory and critical care medicine

Al Alam D, Danopoulos S, Grubbs B, Ali NABM, Mac Aogáin M, Chotirmall SH, Warburton D, Gaggar A, Ambalavanan N, Lal CV.
PMID: 32049546
Am J Respir Crit Care Med. 2020 May 15;201(10):1311-1312. doi: 10.1164/rccm.202001-0221LE.

No abstract available.

Cite
Al Alam D, Danopoulos S, Grubbs B, et al. Reply to de Steenhuijsen Piters and Bogaert: Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination. Am J Respir Crit Care Med. 2020;201(10):1311-1312doi: 10.1164/rccm.202001-0221LE.
Al Alam, D., Danopoulos, S., Grubbs, B., Ali, N. A. B. M., Mac Aogáin, M., Chotirmall, S. H., Warburton, D., Gaggar, A., Ambalavanan, N., & Lal, C. V. (2020). Reply to de Steenhuijsen Piters and Bogaert: Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination. American journal of respiratory and critical care medicine, 201(10), 1311-1312. https://doi.org/10.1164/rccm.202001-0221LE
Al Alam, Denise, et al. "Reply to de Steenhuijsen Piters and Bogaert: Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination." American journal of respiratory and critical care medicine vol. 201,10 (2020): 1311-1312. doi: https://doi.org/10.1164/rccm.202001-0221LE
Al Alam D, Danopoulos S, Grubbs B, Ali NABM, Mac Aogáin M, Chotirmall SH, Warburton D, Gaggar A, Ambalavanan N, Lal CV. Reply to de Steenhuijsen Piters and Bogaert: Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination. Am J Respir Crit Care Med. 2020 May 15;201(10):1311-1312. doi: 10.1164/rccm.202001-0221LE. PMID: 32049546; PMCID: PMC7233351.
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Structural variability of CG-rich DNA 18-mers accommodating double T-T mismatches.

Acta crystallographica. Section D, Structural biology

Kolenko P, Svoboda J, Černý J, Charnavets T, Schneider B.
PMID: 33263329
Acta Crystallogr D Struct Biol. 2020 Dec 01;76:1233-1243. doi: 10.1107/S2059798320014151. Epub 2020 Nov 24.

Solution and crystal data are reported for DNA 18-mers with sequences related to those of bacterial noncoding single-stranded DNA segments called repetitive extragenic palindromes (REPs). Solution CD and melting data showed that the CG-rich, near-palindromic REPs from various bacterial...

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Kolenko P, Svoboda J, Černý J, et al. Structural variability of CG-rich DNA 18-mers accommodating double T-T mismatches. Acta Crystallogr D Struct Biol. 2020;76:1233-1243doi: 10.1107/S2059798320014151.
Kolenko, P., Svoboda, J., Černý, J., Charnavets, T., & Schneider, B. (2020). Structural variability of CG-rich DNA 18-mers accommodating double T-T mismatches. Acta crystallographica. Section D, Structural biology, 761233-1243. https://doi.org/10.1107/S2059798320014151
Kolenko, Petr, et al. "Structural variability of CG-rich DNA 18-mers accommodating double T-T mismatches." Acta crystallographica. Section D, Structural biology vol. 76 (2020): 1233-1243. doi: https://doi.org/10.1107/S2059798320014151
Kolenko P, Svoboda J, Černý J, Charnavets T, Schneider B. Structural variability of CG-rich DNA 18-mers accommodating double T-T mismatches. Acta Crystallogr D Struct Biol. 2020 Dec 01;76:1233-1243. doi: 10.1107/S2059798320014151. Epub 2020 Nov 24. PMID: 33263329; PMCID: PMC7709200.
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Integr8 and Genome Reviews: integrated views of complete genomes and proteomes.

Nucleic acids research

Kersey P, Bower L, Morris L, Horne A, Petryszak R, Kanz C, Kanapin A, Das U, Michoud K, Phan I, Gattiker A, Kulikova T, Faruque N, Duggan K, Mclaren P, Reimholz B, Duret L, Penel S, Reuter I, Apweiler R.
PMID: 15608201
Nucleic Acids Res. 2005 Jan 01;33:D297-302. doi: 10.1093/nar/gki039.

Integr8 is a new web portal for exploring the biology of organisms with completely deciphered genomes. For over 190 species, Integr8 provides access to general information, recent publications, and a detailed statistical overview of the genome and proteome of...

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Kersey P, Bower L, Morris L, et al. Integr8 and Genome Reviews: integrated views of complete genomes and proteomes. Nucleic Acids Res. 2005;33:D297-302doi: 10.1093/nar/gki039.
Kersey, P., Bower, L., Morris, L., Horne, A., Petryszak, R., Kanz, C., Kanapin, A., Das, U., Michoud, K., Phan, I., Gattiker, A., Kulikova, T., Faruque, N., Duggan, K., Mclaren, P., Reimholz, B., Duret, L., Penel, S., Reuter, I., & Apweiler, R. (2005). Integr8 and Genome Reviews: integrated views of complete genomes and proteomes. Nucleic acids research, 33D297-302. https://doi.org/10.1093/nar/gki039
Kersey, Paul, et al. "Integr8 and Genome Reviews: integrated views of complete genomes and proteomes." Nucleic acids research vol. 33 (2005): D297-302. doi: https://doi.org/10.1093/nar/gki039
Kersey P, Bower L, Morris L, Horne A, Petryszak R, Kanz C, Kanapin A, Das U, Michoud K, Phan I, Gattiker A, Kulikova T, Faruque N, Duggan K, Mclaren P, Reimholz B, Duret L, Penel S, Reuter I, Apweiler R. Integr8 and Genome Reviews: integrated views of complete genomes and proteomes. Nucleic Acids Res. 2005 Jan 01;33:D297-302. doi: 10.1093/nar/gki039. PMID: 15608201; PMCID: PMC539993.
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Rapid Sample Preparation and LAMP for Phytoplasma Detection.

Methods in molecular biology (Clifton, N.J.)

Hodgetts J.
PMID: 30362005
Methods Mol Biol. 2019;1875:187-201. doi: 10.1007/978-1-4939-8837-2_15.

Loop-mediated isothermal AMPlification (LAMP) allows the rapid detection of pathogens by polymerase-mediated amplification of target nucleic acid sequences at a single incubation temperature. LAMP can be combined with very simple sample preparation/crude DNA extraction protocols, allowing the method to...

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Hodgetts J. Rapid Sample Preparation and LAMP for Phytoplasma Detection. Methods Mol Biol. 2019;1875:187-201doi: 10.1007/978-1-4939-8837-2_15.
Hodgetts, J. (2019). Rapid Sample Preparation and LAMP for Phytoplasma Detection. Methods in molecular biology (Clifton, N.J.), 1875187-201. https://doi.org/10.1007/978-1-4939-8837-2_15
Hodgetts, Jennifer. "Rapid Sample Preparation and LAMP for Phytoplasma Detection." Methods in molecular biology (Clifton, N.J.) vol. 1875 (2019): 187-201. doi: https://doi.org/10.1007/978-1-4939-8837-2_15
Hodgetts J. Rapid Sample Preparation and LAMP for Phytoplasma Detection. Methods Mol Biol. 2019;1875:187-201. doi: 10.1007/978-1-4939-8837-2_15. PMID: 30362005.
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Showing 1 to 11 of 11 entries